RNA–Protein interactions for RNA: ENST00000570484.1

CTDNEP1-204, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 393 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-204ENST00000570484 CASKO14936 926 aa5.73□□□□□ -1.49
CTDNEP1-204ENST00000570484 TBX1O43435 398 aa5.73□□□□□ -1.49
CTDNEP1-204ENST00000570484 CRYAAP02489 173 aa5.73□□□□□ -1.49
CTDNEP1-204ENST00000570484 SERPINA5P05154 406 aa5.73□□□□□ -1.49
CTDNEP1-204ENST00000570484 MMP7P09237 267 aaPredicted RBP5.73□□□□□ -1.49
CTDNEP1-204ENST00000570484 LIMS3P0CW19 117 aa5.73□□□□□ -1.49
CTDNEP1-204ENST00000570484 LIMS4P0CW20 117 aa5.73□□□□□ -1.49
CTDNEP1-204ENST00000570484 COX5BP10606 129 aa5.73□□□□□ -1.49
CTDNEP1-204ENST00000570484 PLA2G2AP14555 144 aa5.73□□□□□ -1.49
CTDNEP1-204ENST00000570484 CBR1P16152 277 aa5.73□□□□□ -1.49
CTDNEP1-204ENST00000570484 APEX1P27695 318 aaKnown RBP5.73□□□□□ -1.49
CTDNEP1-204ENST00000570484 OPRL1P41146 370 aa5.73□□□□□ -1.49
CTDNEP1-204ENST00000570484 MAP2K4P45985 399 aa5.73□□□□□ -1.49
CTDNEP1-204ENST00000570484 RGS6P49758 472 aa5.73□□□□□ -1.49
CTDNEP1-204ENST00000570484 PRKXP51817 358 aa5.73□□□□□ -1.49
CTDNEP1-204ENST00000570484 OR12D2P58182 307 aa5.73□□□□□ -1.49
CTDNEP1-204ENST00000570484 BDH1Q02338 343 aa5.73□□□□□ -1.49
CTDNEP1-204ENST00000570484 MLLT11Q13015 90 aaPredicted RBP5.73□□□□□ -1.49
CTDNEP1-204ENST00000570484 SPHARQ15513 63 aa5.73□□□□□ -1.49
CTDNEP1-204ENST00000570484 TIGD6Q17RP2 521 aa5.73□□□□□ -1.49
CTDNEP1-204ENST00000570484 CCDC92Q53HC0 331 aaPredicted RBP5.73□□□□□ -1.49
CTDNEP1-204ENST00000570484 LIPNQ5VXI9 398 aa5.73□□□□□ -1.49
CTDNEP1-204ENST00000570484 RNLSQ5VYX0 342 aa5.73□□□□□ -1.49
CTDNEP1-204ENST00000570484 DRAM2Q6UX65 266 aa5.73□□□□□ -1.49
CTDNEP1-204ENST00000570484 TMEM108Q6UXF1 575 aa5.73□□□□□ -1.49
CTDNEP1-204ENST00000570484 EGFL6Q8IUX8 553 aa5.73□□□□□ -1.49
CTDNEP1-204ENST00000570484 ZNF676Q8N7Q3 588 aa5.73□□□□□ -1.49
CTDNEP1-204ENST00000570484 NANOGP1Q8N7R0 232 aa5.73□□□□□ -1.49
CTDNEP1-204ENST00000570484 SSC4DQ8WTU2 575 aa5.73□□□□□ -1.49
CTDNEP1-204ENST00000570484 GATAD2BQ8WXI9 593 aa5.73□□□□□ -1.49
CTDNEP1-204ENST00000570484 PGAM5Q96HS1 289 aa5.73□□□□□ -1.49
CTDNEP1-204ENST00000570484 BOD1Q96IK1 185 aa5.73□□□□□ -1.49
CTDNEP1-204ENST00000570484 DCLRE1CQ96SD1 692 aaKnown RBP5.73□□□□□ -1.49
CTDNEP1-204ENST00000570484 AMELYQ99218 206 aa5.73□□□□□ -1.49
CTDNEP1-204ENST00000570484 KCNJ15Q99712 375 aa5.73□□□□□ -1.49
CTDNEP1-204ENST00000570484 C1QTNF6Q9BXI9 259 aa5.73□□□□□ -1.49
CTDNEP1-204ENST00000570484 ESRP2Q9H6T0 727 aaKnown RBP5.73□□□□□ -1.49
CTDNEP1-204ENST00000570484 ELOVL3Q9HB03 270 aa5.73□□□□□ -1.49
CTDNEP1-204ENST00000570484 PLEKHA1Q9HB21 404 aa5.73□□□□□ -1.49
CTDNEP1-204ENST00000570484 NOX3Q9HBY0 568 aa5.73□□□□□ -1.49
CTDNEP1-204ENST00000570484 SLCO1C1Q9NYB5 712 aa5.73□□□□□ -1.49
CTDNEP1-204ENST00000570484 ZNF224Q9NZL3 707 aa5.73□□□□□ -1.49
CTDNEP1-204ENST00000570484 CLEC2DQ9UHP7 191 aa5.73□□□□□ -1.49
CTDNEP1-204ENST00000570484 MRM2Q9UI43 246 aaKnown RBP5.73□□□□□ -1.49
CTDNEP1-204ENST00000570484 POU2F3Q9UKI9 436 aa5.73□□□□□ -1.49
CTDNEP1-204ENST00000570484 SPEF1Q9Y4P9 236 aa5.73□□□□□ -1.49
CTDNEP1-204ENST00000570484 N6AMT1Q9Y5N5 214 aa5.73□□□□□ -1.49
CTDNEP1-204ENST00000570484 SLC25A15Q9Y619 301 aa5.73□□□□□ -1.49
CTDNEP1-204ENST00000570484 R4GMQ9 66 aa5.73□□□□□ -1.49
CTDNEP1-204ENST00000570484 EPG5Q9HCE0 2579 aa5.73□□□□□ -1.49
CTDNEP1-204ENST00000570484 TRBV2A0A0J9YWF9 115 aa5.72□□□□□ -1.49
CTDNEP1-204ENST00000570484 A0A1B0GVI7 797 aa5.72□□□□□ -1.49
CTDNEP1-204ENST00000570484 MEGF11A6BM72 1044 aa5.72□□□□□ -1.49
CTDNEP1-204ENST00000570484 ZNF503-AS2A6NEH8 195 aa5.72□□□□□ -1.49
CTDNEP1-204ENST00000570484 TRIM64A6NGJ6 449 aa5.72□□□□□ -1.49
CTDNEP1-204ENST00000570484 SYNGR3O43761 229 aa5.72□□□□□ -1.49
CTDNEP1-204ENST00000570484 IGKV3-15P01624 115 aa5.72□□□□□ -1.49
CTDNEP1-204ENST00000570484 LCATP04180 440 aa5.72□□□□□ -1.49
CTDNEP1-204ENST00000570484 LCKP06239 509 aa5.72□□□□□ -1.49
CTDNEP1-204ENST00000570484 CECR9P0C854 216 aa5.72□□□□□ -1.49
CTDNEP1-204ENST00000570484 UBCP0CG48 685 aaKnown RBP5.72□□□□□ -1.49
CTDNEP1-204ENST00000570484 SMIM18P0DKX4 95 aa5.72□□□□□ -1.49
CTDNEP1-204ENST00000570484 CRYGSP22914 178 aa5.72□□□□□ -1.49
CTDNEP1-204ENST00000570484 DCTDP32321 178 aa5.72□□□□□ -1.49
CTDNEP1-204ENST00000570484 PSMB10P40306 273 aa5.72□□□□□ -1.49
CTDNEP1-204ENST00000570484 NR1H2P55055 460 aa5.72□□□□□ -1.49
CTDNEP1-204ENST00000570484 ZNF121P58317 390 aaPredicted RBP5.72□□□□□ -1.49
CTDNEP1-204ENST00000570484 RPS23P62266 143 aaKnown RBP5.72□□□□□ -1.49
CTDNEP1-204ENST00000570484 HIST1H3AP68431 136 aa5.72□□□□□ -1.49
CTDNEP1-204ENST00000570484 EMX1Q04741 257 aaPredicted RBP5.72□□□□□ -1.49
CTDNEP1-204ENST00000570484 MALLQ13021 153 aa5.72□□□□□ -1.49
CTDNEP1-204ENST00000570484 IRF3Q14653 427 aa5.72□□□□□ -1.49
CTDNEP1-204ENST00000570484 CDK5R1Q15078 307 aa5.72□□□□□ -1.49
CTDNEP1-204ENST00000570484 TIMM50Q3ZCQ8 353 aa5.72□□□□□ -1.49
CTDNEP1-204ENST00000570484 CCDC58Q4VC31 144 aa5.72□□□□□ -1.49
CTDNEP1-204ENST00000570484 HIST2H3PS2Q5TEC6 136 aa5.72□□□□□ -1.49
CTDNEP1-204ENST00000570484 UBE2UQ5VVX9 321 aa5.72□□□□□ -1.49
CTDNEP1-204ENST00000570484 RPL22L1Q6P5R6 122 aaKnown RBP5.72□□□□□ -1.49
CTDNEP1-204ENST00000570484 HIST2H3AQ71DI3 136 aa5.72□□□□□ -1.49
CTDNEP1-204ENST00000570484 FAM57BQ71RH2 274 aa5.72□□□□□ -1.49
CTDNEP1-204ENST00000570484 GPR141Q7Z602 305 aa5.72□□□□□ -1.49
CTDNEP1-204ENST00000570484 FAM169BQ8N8A8 192 aa5.72□□□□□ -1.49
CTDNEP1-204ENST00000570484 WDR31Q8NA23 367 aa5.72□□□□□ -1.49
CTDNEP1-204ENST00000570484 IL17RDQ8NFM7 739 aa5.72□□□□□ -1.49
CTDNEP1-204ENST00000570484 OR52H1Q8NGJ2 320 aa5.72□□□□□ -1.49
CTDNEP1-204ENST00000570484 OR5L1Q8NGL2 311 aa5.72□□□□□ -1.49
CTDNEP1-204ENST00000570484 OR10S1Q8NGN2 331 aa5.72□□□□□ -1.49
CTDNEP1-204ENST00000570484 FGFBP3Q8TAT2 258 aa5.72□□□□□ -1.49
CTDNEP1-204ENST00000570484 ABHD4Q8TB40 342 aa5.72□□□□□ -1.49
CTDNEP1-204ENST00000570484 TSEN15Q8WW01 171 aaKnown RBP5.72□□□□□ -1.49
CTDNEP1-204ENST00000570484 MUL1Q969V5 352 aa5.72□□□□□ -1.49
CTDNEP1-204ENST00000570484 APOBEC3DQ96AK3 386 aaPredicted RBP5.72□□□□□ -1.49
CTDNEP1-204ENST00000570484 PELI1Q96FA3 418 aa5.72□□□□□ -1.49
CTDNEP1-204ENST00000570484 RADILQ96JH8 1075 aa5.72□□□□□ -1.49
CTDNEP1-204ENST00000570484 COG8Q96MW5 612 aa5.72□□□□□ -1.49
CTDNEP1-204ENST00000570484 OR5M11Q96RB7 305 aa5.72□□□□□ -1.49
CTDNEP1-204ENST00000570484 SIGLEC11Q96RL6 698 aa5.72□□□□□ -1.49
CTDNEP1-204ENST00000570484 MGLLQ99685 303 aa5.72□□□□□ -1.49
CTDNEP1-204ENST00000570484 OR10A2Q9H208 303 aa5.72□□□□□ -1.49
CTDNEP1-204ENST00000570484 ISG20L2Q9H9L3 353 aaKnown RBP5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms