RNA–Protein interactions for RNA: ENST00000569916.1

CNOT1-220, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-220ENST00000569916 NTN4Q9HB63 628 aa11.07□□□□□ -0.64
CNOT1-220ENST00000569916 DECR2Q9NUI1 292 aa11.07□□□□□ -0.64
CNOT1-220ENST00000569916 PTTG3PQ9NZH4 202 aa11.07□□□□□ -0.64
CNOT1-220ENST00000569916 ZDHHC8Q9ULC8 765 aa11.07□□□□□ -0.64
CNOT1-220ENST00000569916 CACNG2Q9Y698 323 aa11.07□□□□□ -0.64
CNOT1-220ENST00000569916 PPIHO43447 177 aaKnown RBP11.06□□□□□ -0.64
CNOT1-220ENST00000569916 LMX1BO60663 402 aa11.06□□□□□ -0.64
CNOT1-220ENST00000569916 TIPRLO75663 272 aa11.06□□□□□ -0.64
CNOT1-220ENST00000569916 ATP5HO75947 161 aa11.06□□□□□ -0.64
CNOT1-220ENST00000569916 ANXA8P13928 327 aa11.06□□□□□ -0.64
CNOT1-220ENST00000569916 RAC2P15153 192 aa11.06□□□□□ -0.64
CNOT1-220ENST00000569916 PRKACGP22612 351 aa11.06□□□□□ -0.64
CNOT1-220ENST00000569916 IGFBP5P24593 272 aa11.06□□□□□ -0.64
CNOT1-220ENST00000569916 FMO3P31513 532 aa11.06□□□□□ -0.64
CNOT1-220ENST00000569916 ENTPD1P49961 510 aa11.06□□□□□ -0.64
CNOT1-220ENST00000569916 CDH15P55291 814 aa11.06□□□□□ -0.64
CNOT1-220ENST00000569916 ECH1Q13011 328 aa11.06□□□□□ -0.64
CNOT1-220ENST00000569916 CDK5R2Q13319 367 aa11.06□□□□□ -0.64
CNOT1-220ENST00000569916 HLXQ14774 488 aaPredicted RBP11.06□□□□□ -0.64
CNOT1-220ENST00000569916 PCK2Q16822 640 aa11.06□□□□□ -0.64
CNOT1-220ENST00000569916 LINC01590Q5TEZ4 76 aa11.06□□□□□ -0.64
CNOT1-220ENST00000569916 ACSM5Q6NUN0 579 aa11.06□□□□□ -0.64
CNOT1-220ENST00000569916 SLC27A4Q6P1M0 643 aa11.06□□□□□ -0.64
CNOT1-220ENST00000569916 SHQ1Q6PI26 577 aaKnown RBP11.06□□□□□ -0.64
CNOT1-220ENST00000569916 ZNF511Q8NB15 262 aa11.06□□□□□ -0.64
CNOT1-220ENST00000569916 OR5L1Q8NGL2 311 aa11.06□□□□□ -0.64
CNOT1-220ENST00000569916 PTP4A1Q93096 173 aa11.06□□□□□ -0.64
CNOT1-220ENST00000569916 UTP4Q969X6 686 aaKnown RBP11.06□□□□□ -0.64
CNOT1-220ENST00000569916 ELMOD3Q96FG2 381 aa11.06□□□□□ -0.64
CNOT1-220ENST00000569916 C1orf159Q96HA4 380 aa11.06□□□□□ -0.64
CNOT1-220ENST00000569916 MMADHCQ9H3L0 296 aaPredicted RBP11.06□□□□□ -0.64
CNOT1-220ENST00000569916 NARFLQ9H6Q4 476 aa11.06□□□□□ -0.64
CNOT1-220ENST00000569916 MED20Q9H944 212 aa11.06□□□□□ -0.64
CNOT1-220ENST00000569916 DDX28Q9NUL7 540 aaKnown RBP11.06□□□□□ -0.64
CNOT1-220ENST00000569916 KCNS2Q9ULS6 477 aa11.06□□□□□ -0.64
CNOT1-220ENST00000569916 DYSFO75923 2080 aa11.05□□□□□ -0.64
CNOT1-220ENST00000569916 FAM183AA6NL82 134 aa11.05□□□□□ -0.64
CNOT1-220ENST00000569916 F5H5K5 113 aa11.05□□□□□ -0.64
CNOT1-220ENST00000569916 DEAF1O75398 565 aaPredicted RBP11.05□□□□□ -0.64
CNOT1-220ENST00000569916 TGFAP01135 160 aa11.05□□□□□ -0.64
CNOT1-220ENST00000569916 SPARCP09486 303 aa11.05□□□□□ -0.64
CNOT1-220ENST00000569916 OSMP13725 252 aa11.05□□□□□ -0.64
CNOT1-220ENST00000569916 POU1F1P28069 291 aa11.05□□□□□ -0.64
CNOT1-220ENST00000569916 OTX1P32242 354 aaPredicted RBP11.05□□□□□ -0.64
CNOT1-220ENST00000569916 TNFAIP6P98066 277 aaPredicted RBP11.05□□□□□ -0.64
CNOT1-220ENST00000569916 GINS1Q14691 196 aa11.05□□□□□ -0.64
CNOT1-220ENST00000569916 HFEQ30201 348 aa11.05□□□□□ -0.64
CNOT1-220ENST00000569916 CHRFAM7AQ494W8 412 aa11.05□□□□□ -0.64
CNOT1-220ENST00000569916 AVPI1Q5T686 147 aa11.05□□□□□ -0.64
CNOT1-220ENST00000569916 DCXRQ7Z4W1 244 aa11.05□□□□□ -0.64
CNOT1-220ENST00000569916 NAA40Q86UY6 237 aa11.05□□□□□ -0.64
CNOT1-220ENST00000569916 OR5AS1Q8N127 324 aa11.05□□□□□ -0.64
CNOT1-220ENST00000569916 OR6K6Q8NGW6 343 aa11.05□□□□□ -0.64
CNOT1-220ENST00000569916 EGLN1Q9GZT9 426 aa11.05□□□□□ -0.64
CNOT1-220ENST00000569916 ZNF556Q9HAH1 456 aa11.05□□□□□ -0.64
CNOT1-220ENST00000569916 CDC42EP3Q9UKI2 254 aa11.05□□□□□ -0.64
CNOT1-220ENST00000569916 KIAA1324LA8MWY0 1029 aaPredicted RBP11.04□□□□□ -0.64
CNOT1-220ENST00000569916 CLDN25C9JDP6 229 aa11.04□□□□□ -0.64
CNOT1-220ENST00000569916 M0R135 149 aa11.04□□□□□ -0.64
CNOT1-220ENST00000569916 SURF4O15260 269 aa11.04□□□□□ -0.64
CNOT1-220ENST00000569916 ANOS1P23352 680 aa11.04□□□□□ -0.64
CNOT1-220ENST00000569916 BLVRAP53004 296 aa11.04□□□□□ -0.64
CNOT1-220ENST00000569916 LMO4P61968 165 aa11.04□□□□□ -0.64
CNOT1-220ENST00000569916 CDK5Q00535 292 aa11.04□□□□□ -0.64
CNOT1-220ENST00000569916 MVKQ03426 396 aa11.04□□□□□ -0.64
CNOT1-220ENST00000569916 HNRNPA0Q13151 305 aaKnown RBP11.04□□□□□ -0.64
CNOT1-220ENST00000569916 ATP6AP1Q15904 470 aa11.04□□□□□ -0.64
CNOT1-220ENST00000569916 TEX30Q5JUR7 227 aa11.04□□□□□ -0.64
CNOT1-220ENST00000569916 OR2T2Q6IF00 324 aa11.04□□□□□ -0.64
CNOT1-220ENST00000569916 FAHD1Q6P587 224 aa11.04□□□□□ -0.64
CNOT1-220ENST00000569916 LINC01356Q8N9X3 169 aa11.04□□□□□ -0.64
CNOT1-220ENST00000569916 ATG16L2Q8NAA4 619 aa11.04□□□□□ -0.64
CNOT1-220ENST00000569916 OR2Z1Q8NG97 314 aa11.04□□□□□ -0.64
CNOT1-220ENST00000569916 ST7LQ8TDW4 575 aa11.04□□□□□ -0.64
CNOT1-220ENST00000569916 SLAMF6Q96DU3 332 aa11.04□□□□□ -0.64
CNOT1-220ENST00000569916 NRBF2Q96F24 287 aa11.04□□□□□ -0.64
CNOT1-220ENST00000569916 ZNF799Q96GE5 643 aa11.04□□□□□ -0.64
CNOT1-220ENST00000569916 TREM2Q9NZC2 230 aa11.04□□□□□ -0.64
CNOT1-220ENST00000569916 WIPI2Q9Y4P8 454 aa11.04□□□□□ -0.64
CNOT1-220ENST00000569916 CUBNO60494 3623 aa11.04□□□□□ -0.64
CNOT1-220ENST00000569916 IQCF6A8MYZ5 107 aa11.03□□□□□ -0.64
CNOT1-220ENST00000569916 FAM157AC9JC47 383 aa11.03□□□□□ -0.64
CNOT1-220ENST00000569916 ZNF593O00488 134 aaPredicted RBP11.03□□□□□ -0.64
CNOT1-220ENST00000569916 GLCEO94923 617 aa11.03□□□□□ -0.64
CNOT1-220ENST00000569916 LCATP04180 440 aa11.03□□□□□ -0.64
CNOT1-220ENST00000569916 TPTEP56180 551 aa11.03□□□□□ -0.64
CNOT1-220ENST00000569916 PRSS12P56730 875 aa11.03□□□□□ -0.64
CNOT1-220ENST00000569916 GK2Q14410 553 aaPredicted RBP11.03□□□□□ -0.64
CNOT1-220ENST00000569916 C1orf146Q5VVC0 180 aa11.03□□□□□ -0.64
CNOT1-220ENST00000569916 OR8G5Q8NG78 346 aa11.03□□□□□ -0.64
CNOT1-220ENST00000569916 OR5K1Q8NHB7 308 aa11.03□□□□□ -0.64
CNOT1-220ENST00000569916 DNAJC9Q8WXX5 260 aa11.03□□□□□ -0.64
CNOT1-220ENST00000569916 CCL17Q92583 94 aa11.03□□□□□ -0.64
CNOT1-220ENST00000569916 SPTSSAQ969W0 71 aa11.03□□□□□ -0.64
CNOT1-220ENST00000569916 DUS3LQ96G46 650 aaKnown RBP11.03□□□□□ -0.64
CNOT1-220ENST00000569916 INTS14Q96SY0 518 aa11.03□□□□□ -0.64
CNOT1-220ENST00000569916 COPS4Q9BT78 406 aa11.03□□□□□ -0.64
CNOT1-220ENST00000569916 MARCH7Q9H992 704 aa11.03□□□□□ -0.64
CNOT1-220ENST00000569916 SLC25A19Q9HC21 320 aa11.03□□□□□ -0.64
CNOT1-220ENST00000569916 DCAF16Q9NXF7 216 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms