RNA–Protein interactions for RNA: ENST00000569569.5

HERPUD1-218, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 1,125 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-218ENST00000569569 CMBLQ96DG6 245 aa11.78□□□□□ -0.52
HERPUD1-218ENST00000569569 MAP6Q96JE9 813 aa11.78□□□□□ -0.52
HERPUD1-218ENST00000569569 HCAR1Q9BXC0 346 aa11.78□□□□□ -0.52
HERPUD1-218ENST00000569569 POFUT1Q9H488 388 aa11.78□□□□□ -0.52
HERPUD1-218ENST00000569569 MED20Q9H944 212 aa11.78□□□□□ -0.52
HERPUD1-218ENST00000569569 CHODLQ9H9P2 273 aa11.78□□□□□ -0.52
HERPUD1-218ENST00000569569 SLC25A19Q9HC21 320 aa11.78□□□□□ -0.52
HERPUD1-218ENST00000569569 DECR2Q9NUI1 292 aa11.78□□□□□ -0.52
HERPUD1-218ENST00000569569 TPD52L2O43399 206 aaKnown RBP11.77□□□□□ -0.53
HERPUD1-218ENST00000569569 SPRY3O43610 288 aa11.77□□□□□ -0.53
HERPUD1-218ENST00000569569 TIMM8AO60220 97 aaPredicted RBP11.77□□□□□ -0.53
HERPUD1-218ENST00000569569 GLCEO94923 617 aa11.77□□□□□ -0.53
HERPUD1-218ENST00000569569 ADH4P08319 380 aa11.77□□□□□ -0.53
HERPUD1-218ENST00000569569 SPARCP09486 303 aa11.77□□□□□ -0.53
HERPUD1-218ENST00000569569 ACSM4P0C7M7 580 aa11.77□□□□□ -0.53
HERPUD1-218ENST00000569569 RAC2P15153 192 aa11.77□□□□□ -0.53
HERPUD1-218ENST00000569569 TPTEP56180 551 aa11.77□□□□□ -0.53
HERPUD1-218ENST00000569569 TMEM33P57088 247 aa11.77□□□□□ -0.53
HERPUD1-218ENST00000569569 ACTR3P61158 418 aa11.77□□□□□ -0.53
HERPUD1-218ENST00000569569 ESRRGP62508 458 aa11.77□□□□□ -0.53
HERPUD1-218ENST00000569569 TSTQ16762 297 aaKnown RBP11.77□□□□□ -0.53
HERPUD1-218ENST00000569569 ZMAT1Q5H9K5 638 aa11.77□□□□□ -0.53
HERPUD1-218ENST00000569569 TMEM236Q5W0B7 351 aa11.77□□□□□ -0.53
HERPUD1-218ENST00000569569 FBXW12Q6X9E4 464 aa11.77□□□□□ -0.53
HERPUD1-218ENST00000569569 COLCA1Q6ZS62 124 aa11.77□□□□□ -0.53
HERPUD1-218ENST00000569569 DCXRQ7Z4W1 244 aa11.77□□□□□ -0.53
HERPUD1-218ENST00000569569 GTF3AQ92664 365 aaKnown RBP11.77□□□□□ -0.53
HERPUD1-218ENST00000569569 SPTSSAQ969W0 71 aa11.77□□□□□ -0.53
HERPUD1-218ENST00000569569 CENPNQ96H22 339 aaPredicted RBP11.77□□□□□ -0.53
HERPUD1-218ENST00000569569 PLEKHA8Q96JA3 519 aa11.77□□□□□ -0.53
HERPUD1-218ENST00000569569 DIRC2Q96SL1 478 aa11.77□□□□□ -0.53
HERPUD1-218ENST00000569569 C1QTNF5Q9BXJ0 243 aa11.77□□□□□ -0.53
HERPUD1-218ENST00000569569 OR51V1Q9H2C8 321 aa11.77□□□□□ -0.53
HERPUD1-218ENST00000569569 KRT84Q9NSB2 600 aa11.77□□□□□ -0.53
HERPUD1-218ENST00000569569 PURGQ9UJV8 347 aaKnown RBP11.77□□□□□ -0.53
HERPUD1-218ENST00000569569 ZDHHC8Q9ULC8 765 aa11.77□□□□□ -0.53
HERPUD1-218ENST00000569569 IGHV4-61A0A0C4DH41 118 aa11.76□□□□□ -0.53
HERPUD1-218ENST00000569569 TLX2O43763 284 aaPredicted RBP11.76□□□□□ -0.53
HERPUD1-218ENST00000569569 IGHV1-46P01743 117 aa11.76□□□□□ -0.53
HERPUD1-218ENST00000569569 TACSTD2P09758 323 aa11.76□□□□□ -0.53
HERPUD1-218ENST00000569569 PSKH1P11801 424 aa11.76□□□□□ -0.53
HERPUD1-218ENST00000569569 GSTT1P30711 240 aa11.76□□□□□ -0.53
HERPUD1-218ENST00000569569 CRYBB2P43320 205 aa11.76□□□□□ -0.53
HERPUD1-218ENST00000569569 PPP2R2BQ00005 443 aa11.76□□□□□ -0.53
HERPUD1-218ENST00000569569 PTGES3Q15185 160 aaKnown RBP11.76□□□□□ -0.53
HERPUD1-218ENST00000569569 SNAPC1Q16533 368 aa11.76□□□□□ -0.53
HERPUD1-218ENST00000569569 KDM4DQ6B0I6 523 aa11.76□□□□□ -0.53
HERPUD1-218ENST00000569569 CYB5R2Q6BCY4 276 aa11.76□□□□□ -0.53
HERPUD1-218ENST00000569569 PLBD1Q6P4A8 553 aa11.76□□□□□ -0.53
HERPUD1-218ENST00000569569 SHFQ7M4L6 423 aa11.76□□□□□ -0.53
HERPUD1-218ENST00000569569 NAA40Q86UY6 237 aa11.76□□□□□ -0.53
HERPUD1-218ENST00000569569 CPOQ8IVL8 374 aa11.76□□□□□ -0.53
HERPUD1-218ENST00000569569 OR10S1Q8NGN2 331 aa11.76□□□□□ -0.53
HERPUD1-218ENST00000569569 YIPF5Q969M3 257 aa11.76□□□□□ -0.53
HERPUD1-218ENST00000569569 INTS14Q96SY0 518 aa11.76□□□□□ -0.53
HERPUD1-218ENST00000569569 EGLN1Q9GZT9 426 aa11.76□□□□□ -0.53
HERPUD1-218ENST00000569569 GABARAPL1Q9H0R8 117 aa11.76□□□□□ -0.53
HERPUD1-218ENST00000569569 SEMA6AQ9H2E6 1030 aa11.76□□□□□ -0.53
HERPUD1-218ENST00000569569 MARCH7Q9H992 704 aa11.76□□□□□ -0.53
HERPUD1-218ENST00000569569 SAP30LQ9HAJ7 183 aa11.76□□□□□ -0.53
HERPUD1-218ENST00000569569 MSL2Q9HCI7 577 aa11.76□□□□□ -0.53
HERPUD1-218ENST00000569569 ZNF275Q9NSD4 429 aaPredicted RBP11.76□□□□□ -0.53
HERPUD1-218ENST00000569569 DDX28Q9NUL7 540 aaKnown RBP11.76□□□□□ -0.53
HERPUD1-218ENST00000569569 TVP23BQ9NYZ1 205 aa11.76□□□□□ -0.53
HERPUD1-218ENST00000569569 PTTG3PQ9NZH4 202 aa11.76□□□□□ -0.53
HERPUD1-218ENST00000569569 ABCA2Q9BZC7 2435 aa11.75□□□□□ -0.53
HERPUD1-218ENST00000569569 ZSCAN5BA6NJL1 495 aa11.75□□□□□ -0.53
HERPUD1-218ENST00000569569 M0R135 149 aa11.75□□□□□ -0.53
HERPUD1-218ENST00000569569 PRODHO43272 600 aa11.75□□□□□ -0.53
HERPUD1-218ENST00000569569 LILRA1O75019 489 aa11.75□□□□□ -0.53
HERPUD1-218ENST00000569569 LCATP04180 440 aa11.75□□□□□ -0.53
HERPUD1-218ENST00000569569 HOXB4P17483 251 aaPredicted RBP11.75□□□□□ -0.53
HERPUD1-218ENST00000569569 OTX1P32242 354 aaPredicted RBP11.75□□□□□ -0.53
HERPUD1-218ENST00000569569 GPR6P46095 362 aaPredicted RBP11.75□□□□□ -0.53
HERPUD1-218ENST00000569569 GZMKP49863 264 aa11.75□□□□□ -0.53
HERPUD1-218ENST00000569569 CDK5R2Q13319 367 aa11.75□□□□□ -0.53
HERPUD1-218ENST00000569569 HLXQ14774 488 aaPredicted RBP11.75□□□□□ -0.53
HERPUD1-218ENST00000569569 KPNB1Q14974 876 aaKnown RBP11.75□□□□□ -0.53
HERPUD1-218ENST00000569569 TAF13Q15543 124 aa11.75□□□□□ -0.53
HERPUD1-218ENST00000569569 KLHL12Q53G59 568 aa11.75□□□□□ -0.53
HERPUD1-218ENST00000569569 SLC35D3Q5M8T2 416 aa11.75□□□□□ -0.53
HERPUD1-218ENST00000569569 USP51Q70EK9 711 aa11.75□□□□□ -0.53
HERPUD1-218ENST00000569569 DPY19L4Q7Z388 723 aa11.75□□□□□ -0.53
HERPUD1-218ENST00000569569 ERI1Q8IV48 349 aaKnown RBP11.75□□□□□ -0.53
HERPUD1-218ENST00000569569 C10orf67Q8IYJ2 551 aa11.75□□□□□ -0.53
HERPUD1-218ENST00000569569 OR6N2Q8NGY6 317 aa11.75□□□□□ -0.53
HERPUD1-218ENST00000569569 ST7LQ8TDW4 575 aa11.75□□□□□ -0.53
HERPUD1-218ENST00000569569 PYDC1Q8WXC3 89 aa11.75□□□□□ -0.53
HERPUD1-218ENST00000569569 SLAMF6Q96DU3 332 aa11.75□□□□□ -0.53
HERPUD1-218ENST00000569569 ZNF799Q96GE5 643 aa11.75□□□□□ -0.53
HERPUD1-218ENST00000569569 CENPMQ9NSP4 180 aa11.75□□□□□ -0.53
HERPUD1-218ENST00000569569 ENOPH1Q9UHY7 261 aa11.75□□□□□ -0.53
HERPUD1-218ENST00000569569 NF1P21359 2839 aa11.74□□□□□ -0.53
HERPUD1-218ENST00000569569 DOCK11Q5JSL3 2073 aa11.74□□□□□ -0.53
HERPUD1-218ENST00000569569 IGHV1-69-2A0A0G2JMI3 117 aa11.74□□□□□ -0.53
HERPUD1-218ENST00000569569 ZNF878C9JN71 531 aa11.74□□□□□ -0.53
HERPUD1-218ENST00000569569 INAFM1C9JVW0 142 aa11.74□□□□□ -0.53
HERPUD1-218ENST00000569569 CDC14BO60729 498 aa11.74□□□□□ -0.53
HERPUD1-218ENST00000569569 MITFO75030 526 aaPredicted RBP11.74□□□□□ -0.53
HERPUD1-218ENST00000569569 RP2O75695 350 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms