RNA–Protein interactions for RNA: ENST00000565393.2

TCF4-228, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 314 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-228ENST00000565393 FBXW12Q6X9E4 464 aa5.4□□□□□ -1.54
TCF4-228ENST00000565393 USP43Q70EL4 1123 aa5.4□□□□□ -1.54
TCF4-228ENST00000565393 HIST2H3AQ71DI3 136 aa5.4□□□□□ -1.54
TCF4-228ENST00000565393 MRPL21Q7Z2W9 205 aaKnown RBP5.4□□□□□ -1.54
TCF4-228ENST00000565393 MOGAT3Q86VF5 341 aa5.4□□□□□ -1.54
TCF4-228ENST00000565393 ZDHHC21Q8IVQ6 265 aa5.4□□□□□ -1.54
TCF4-228ENST00000565393 DEFB107AQ8IZN7 70 aa5.4□□□□□ -1.54
TCF4-228ENST00000565393 PGAM4Q8N0Y7 254 aa5.4□□□□□ -1.54
TCF4-228ENST00000565393 MUC20Q8N307 709 aaPredicted RBP5.4□□□□□ -1.54
TCF4-228ENST00000565393 BOLLQ8N9W6 283 aaKnown RBP5.4□□□□□ -1.54
TCF4-228ENST00000565393 DEFB108BQ8NET1 73 aa5.4□□□□□ -1.54
TCF4-228ENST00000565393 OR10AD1Q8NGE0 317 aa5.4□□□□□ -1.54
TCF4-228ENST00000565393 FANK1Q8TC84 345 aa5.4□□□□□ -1.54
TCF4-228ENST00000565393 FAM216AQ8WUB2 273 aa5.4□□□□□ -1.54
TCF4-228ENST00000565393 PLEKHA8Q96JA3 519 aa5.4□□□□□ -1.54
TCF4-228ENST00000565393 MEGF10Q96KG7 1140 aa5.4□□□□□ -1.54
TCF4-228ENST00000565393 COQ7Q99807 217 aa5.4□□□□□ -1.54
TCF4-228ENST00000565393 FUZQ9BT04 418 aa5.4□□□□□ -1.54
TCF4-228ENST00000565393 RBM4Q9BWF3 364 aaKnown RBP5.4□□□□□ -1.54
TCF4-228ENST00000565393 MS4A7Q9GZW8 240 aaPredicted RBP5.4□□□□□ -1.54
TCF4-228ENST00000565393 FN3KQ9H479 309 aa5.4□□□□□ -1.54
TCF4-228ENST00000565393 TMEM165Q9HC07 324 aa5.4□□□□□ -1.54
TCF4-228ENST00000565393 GCM1Q9NP62 436 aa5.4□□□□□ -1.54
TCF4-228ENST00000565393 IL1RAPQ9NPH3 570 aa5.4□□□□□ -1.54
TCF4-228ENST00000565393 CENPMQ9NSP4 180 aa5.4□□□□□ -1.54
TCF4-228ENST00000565393 ARL8BQ9NVJ2 186 aa5.4□□□□□ -1.54
TCF4-228ENST00000565393 NDE1Q9NXR1 346 aa5.4□□□□□ -1.54
TCF4-228ENST00000565393 OR5V1Q9UGF6 321 aa5.4□□□□□ -1.54
TCF4-228ENST00000565393 CD300AQ9UGN4 299 aa5.4□□□□□ -1.54
TCF4-228ENST00000565393 OPN4Q9UHM6 478 aa5.4□□□□□ -1.54
TCF4-228ENST00000565393 NUP50Q9UKX7 468 aa5.4□□□□□ -1.54
TCF4-228ENST00000565393 ARL2BPQ9Y2Y0 163 aa5.4□□□□□ -1.54
TCF4-228ENST00000565393 PPIAL4AQ9Y536 164 aa5.4□□□□□ -1.54
TCF4-228ENST00000565393 LHFPL6Q9Y693 200 aa5.4□□□□□ -1.54
TCF4-228ENST00000565393 ALPK2Q86TB3 2170 aa5.4□□□□□ -1.55
TCF4-228ENST00000565393 CADP27708 2225 aa5.4□□□□□ -1.55
TCF4-228ENST00000565393 NIPBLQ6KC79 2804 aaeCLIP5.4□□□□□ -1.55
TCF4-228ENST00000565393 IGHV3OR16-10A0A075B7F0 116 aa5.39□□□□□ -1.55
TCF4-228ENST00000565393 IGLV1-36A0A0B4J1U3 117 aa5.39□□□□□ -1.55
TCF4-228ENST00000565393 PPIAL4CA0A0B4J2A2 164 aa5.39□□□□□ -1.55
TCF4-228ENST00000565393 OR6C68A6NDL8 312 aa5.39□□□□□ -1.55
TCF4-228ENST00000565393 GGT3PA6NGU5 568 aa5.39□□□□□ -1.55
TCF4-228ENST00000565393 TVP23AA6NH52 213 aa5.39□□□□□ -1.55
TCF4-228ENST00000565393 B2RBV5 119 aa5.39□□□□□ -1.55
TCF4-228ENST00000565393 J3QW42 95 aa5.39□□□□□ -1.55
TCF4-228ENST00000565393 ARPC2O15144 300 aa5.39□□□□□ -1.55
TCF4-228ENST00000565393 RRP9O43818 475 aaKnown RBP5.39□□□□□ -1.55
TCF4-228ENST00000565393 DCTN3O75935 186 aa5.39□□□□□ -1.55
TCF4-228ENST00000565393 CCNB2O95067 398 aa5.39□□□□□ -1.55
TCF4-228ENST00000565393 ACSM4P0C7M7 580 aa5.39□□□□□ -1.55
TCF4-228ENST00000565393 HSD17B1P14061 328 aa5.39□□□□□ -1.55
TCF4-228ENST00000565393 CA6P23280 308 aa5.39□□□□□ -1.55
TCF4-228ENST00000565393 PYCR1P32322 319 aa5.39□□□□□ -1.55
TCF4-228ENST00000565393 GSSP48637 474 aa5.39□□□□□ -1.55
TCF4-228ENST00000565393 MNAT1P51948 309 aa5.39□□□□□ -1.55
TCF4-228ENST00000565393 GNB2P62879 340 aa5.39□□□□□ -1.55
TCF4-228ENST00000565393 KHDRBS1Q07666 443 aaKnown RBP eCLIP5.39□□□□□ -1.55
TCF4-228ENST00000565393 COX10Q12887 443 aa5.39□□□□□ -1.55
TCF4-228ENST00000565393 TSPAN31Q12999 210 aa5.39□□□□□ -1.55
TCF4-228ENST00000565393 BAMBIQ13145 260 aa5.39□□□□□ -1.55
TCF4-228ENST00000565393 OR8G1Q15617 311 aa5.39□□□□□ -1.55
TCF4-228ENST00000565393 SLC18B1Q6NT16 456 aa5.39□□□□□ -1.55
TCF4-228ENST00000565393 LRRN1Q6UXK5 716 aa5.39□□□□□ -1.55
TCF4-228ENST00000565393 CFAP77Q6ZQR2 320 aa5.39□□□□□ -1.55
TCF4-228ENST00000565393 PGAP1Q75T13 922 aa5.39□□□□□ -1.55
TCF4-228ENST00000565393 C1orf87Q8N0U7 546 aa5.39□□□□□ -1.55
TCF4-228ENST00000565393 BCL6BQ8N143 479 aaPredicted RBP5.39□□□□□ -1.55
TCF4-228ENST00000565393 SIGLECL1Q8N7X8 197 aa5.39□□□□□ -1.55
TCF4-228ENST00000565393 CYB561A3Q8NBI2 242 aa5.39□□□□□ -1.55
TCF4-228ENST00000565393 SDR9C7Q8NEX9 313 aa5.39□□□□□ -1.55
TCF4-228ENST00000565393 PROKR2Q8NFJ6 384 aa5.39□□□□□ -1.55
TCF4-228ENST00000565393 SEMA6DQ8NFY4 1073 aa5.39□□□□□ -1.55
TCF4-228ENST00000565393 SLC26A10Q8NG04 563 aa5.39□□□□□ -1.55
TCF4-228ENST00000565393 OR52L1Q8NGH7 329 aa5.39□□□□□ -1.55
TCF4-228ENST00000565393 OR51L1Q8NGJ5 315 aa5.39□□□□□ -1.55
TCF4-228ENST00000565393 OR11L1Q8NGX0 322 aa5.39□□□□□ -1.55
TCF4-228ENST00000565393 OR2T4Q8NH00 348 aa5.39□□□□□ -1.55
TCF4-228ENST00000565393 POP5Q969H6 163 aaKnown RBP5.39□□□□□ -1.55
TCF4-228ENST00000565393 SPTSSAQ969W0 71 aa5.39□□□□□ -1.55
TCF4-228ENST00000565393 OTULINQ96BN8 352 aa5.39□□□□□ -1.55
TCF4-228ENST00000565393 DHRS1Q96LJ7 313 aa5.39□□□□□ -1.55
TCF4-228ENST00000565393 DUX5Q96PT3 197 aa5.39□□□□□ -1.55
TCF4-228ENST00000565393 ATF6BQ99941 703 aa5.39□□□□□ -1.55
TCF4-228ENST00000565393 SLC30A2Q9BRI3 323 aa5.39□□□□□ -1.55
TCF4-228ENST00000565393 TMEM246Q9BRR3 403 aa5.39□□□□□ -1.55
TCF4-228ENST00000565393 SSBP3Q9BWW4 388 aaPredicted RBP5.39□□□□□ -1.55
TCF4-228ENST00000565393 C1QTNF5Q9BXJ0 243 aa5.39□□□□□ -1.55
TCF4-228ENST00000565393 PLA2G12AQ9BZM1 189 aa5.39□□□□□ -1.55
TCF4-228ENST00000565393 EGLN3Q9H6Z9 239 aa5.39□□□□□ -1.55
TCF4-228ENST00000565393 UFSP2Q9NUQ7 469 aa5.39□□□□□ -1.55
TCF4-228ENST00000565393 MIOXQ9UGB7 285 aa5.39□□□□□ -1.55
TCF4-228ENST00000565393 ATPIF1Q9UII2 106 aa5.39□□□□□ -1.55
TCF4-228ENST00000565393 INSIG2Q9Y5U4 225 aa5.39□□□□□ -1.55
TCF4-228ENST00000565393 NAV3Q8IVL0 2385 aa5.39□□□□□ -1.55
TCF4-228ENST00000565393 KIR2DS1A0A191URI9 304 aa5.38□□□□□ -1.55
TCF4-228ENST00000565393 TMEM89A2RUT3 159 aa5.38□□□□□ -1.55
TCF4-228ENST00000565393 CEACAM18A8MTB9 384 aa5.38□□□□□ -1.55
TCF4-228ENST00000565393 IQCF6A8MYZ5 107 aa5.38□□□□□ -1.55
TCF4-228ENST00000565393 ZNF593O00488 134 aaPredicted RBP5.38□□□□□ -1.55
TCF4-228ENST00000565393 SEMG1P04279 462 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms