RNA–Protein interactions for RNA: ENST00000563798.1

VPS9D1-203, Transcript of VPS9 domain containing 1, humanhuman

TSL 3

Gene VPS9D1, Length 459 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-203ENST00000563798 HMGA2P52926 109 aa14.46□□□□□ -0.09
VPS9D1-203ENST00000563798 ACTG1P63261 375 aa14.46□□□□□ -0.09
VPS9D1-203ENST00000563798 SPIBQ01892 262 aa14.46□□□□□ -0.09
VPS9D1-203ENST00000563798 ZNF154Q13106 437 aa14.46□□□□□ -0.09
VPS9D1-203ENST00000563798 SLC36A3Q495N2 470 aa14.46□□□□□ -0.09
VPS9D1-203ENST00000563798 OR2T2Q6IF00 324 aa14.46□□□□□ -0.09
VPS9D1-203ENST00000563798 SLC18B1Q6NT16 456 aa14.46□□□□□ -0.09
VPS9D1-203ENST00000563798 JAZF1Q86VZ6 243 aa14.46□□□□□ -0.09
VPS9D1-203ENST00000563798 ATG16L2Q8NAA4 619 aa14.46□□□□□ -0.09
VPS9D1-203ENST00000563798 MCUR1Q96AQ8 359 aa14.46□□□□□ -0.09
VPS9D1-203ENST00000563798 NSMCE2Q96MF7 247 aa14.46□□□□□ -0.09
VPS9D1-203ENST00000563798 SRA1Q9HD15 236 aaKnown RBP14.46□□□□□ -0.09
VPS9D1-203ENST00000563798 ESM1Q9NQ30 184 aa14.46□□□□□ -0.09
VPS9D1-203ENST00000563798 CYB5R1Q9UHQ9 305 aa14.46□□□□□ -0.09
VPS9D1-203ENST00000563798 LRCH1Q9Y2L9 728 aa14.46□□□□□ -0.09
VPS9D1-203ENST00000563798 ARHGAP32A7KAX9 2087 aa14.46□□□□□ -0.09
VPS9D1-203ENST00000563798 OR6C68A6NDL8 312 aa14.45□□□□□ -0.1
VPS9D1-203ENST00000563798 ARPC2O15144 300 aa14.45□□□□□ -0.1
VPS9D1-203ENST00000563798 MLNRO43193 412 aa14.45□□□□□ -0.1
VPS9D1-203ENST00000563798 OR10H3O60404 316 aa14.45□□□□□ -0.1
VPS9D1-203ENST00000563798 RGS9O75916 674 aaPredicted RBP14.45□□□□□ -0.1
VPS9D1-203ENST00000563798 FABP3P05413 133 aa14.45□□□□□ -0.1
VPS9D1-203ENST00000563798 ACSM4P0C7M7 580 aa14.45□□□□□ -0.1
VPS9D1-203ENST00000563798 PPIAL4GP0DN37 164 aa14.45□□□□□ -0.1
VPS9D1-203ENST00000563798 SELEP16581 610 aa14.45□□□□□ -0.1
VPS9D1-203ENST00000563798 GGT2P36268 569 aa14.45□□□□□ -0.1
VPS9D1-203ENST00000563798 RBMXP38159 391 aaKnown RBP14.45□□□□□ -0.1
VPS9D1-203ENST00000563798 GATA4P43694 442 aa14.45□□□□□ -0.1
VPS9D1-203ENST00000563798 SEC61A1P61619 476 aaKnown RBP14.45□□□□□ -0.1
VPS9D1-203ENST00000563798 PAX2Q02962 417 aa14.45□□□□□ -0.1
VPS9D1-203ENST00000563798 TSPAN31Q12999 210 aa14.45□□□□□ -0.1
VPS9D1-203ENST00000563798 CORO6Q6QEF8 472 aa14.45□□□□□ -0.1
VPS9D1-203ENST00000563798 ZNF620Q6ZNG0 422 aa14.45□□□□□ -0.1
VPS9D1-203ENST00000563798 ZNF771Q7L3S4 317 aaPredicted RBP14.45□□□□□ -0.1
VPS9D1-203ENST00000563798 OR5AS1Q8N127 324 aa14.45□□□□□ -0.1
VPS9D1-203ENST00000563798 CELF2-AS1Q8N7Q2 184 aa14.45□□□□□ -0.1
VPS9D1-203ENST00000563798 OR4K13Q8NH42 304 aa14.45□□□□□ -0.1
VPS9D1-203ENST00000563798 GCDHQ92947 438 aaPredicted RBP14.45□□□□□ -0.1
VPS9D1-203ENST00000563798 DDOQ99489 341 aa14.45□□□□□ -0.1
VPS9D1-203ENST00000563798 IFT27Q9BW83 186 aa14.45□□□□□ -0.1
VPS9D1-203ENST00000563798 NSRP1Q9H0G5 558 aaKnown RBP14.45□□□□□ -0.1
VPS9D1-203ENST00000563798 TMEM165Q9HC07 324 aa14.45□□□□□ -0.1
VPS9D1-203ENST00000563798 PNRC2Q9NPJ4 139 aaKnown RBP14.45□□□□□ -0.1
VPS9D1-203ENST00000563798 RPRD1BQ9NQG5 326 aaKnown RBP14.45□□□□□ -0.1
VPS9D1-203ENST00000563798 KCNG2Q9UJ96 466 aa14.45□□□□□ -0.1
VPS9D1-203ENST00000563798 AUP1Q9Y679 476 aa14.45□□□□□ -0.1
VPS9D1-203ENST00000563798 CEACAM18A8MTB9 384 aa14.44□□□□□ -0.1
VPS9D1-203ENST00000563798 KRT36O76013 467 aa14.44□□□□□ -0.1
VPS9D1-203ENST00000563798 CENPAP49450 140 aa14.44□□□□□ -0.1
VPS9D1-203ENST00000563798 PAX8Q06710 450 aa14.44□□□□□ -0.1
VPS9D1-203ENST00000563798 ESCO2Q56NI9 601 aa14.44□□□□□ -0.1
VPS9D1-203ENST00000563798 KLF17Q5JT82 389 aaPredicted RBP14.44□□□□□ -0.1
VPS9D1-203ENST00000563798 CFAP77Q6ZQR2 320 aa14.44□□□□□ -0.1
VPS9D1-203ENST00000563798 OR10AD1Q8NGE0 317 aa14.44□□□□□ -0.1
VPS9D1-203ENST00000563798 GNPDA2Q8TDQ7 276 aa14.44□□□□□ -0.1
VPS9D1-203ENST00000563798 DACT3Q96B18 629 aaPredicted RBP14.44□□□□□ -0.1
VPS9D1-203ENST00000563798 CDRT15Q96T59 188 aa14.44□□□□□ -0.1
VPS9D1-203ENST00000563798 ATF6BQ99941 703 aa14.44□□□□□ -0.1
VPS9D1-203ENST00000563798 HCAR1Q9BXC0 346 aa14.44□□□□□ -0.1
VPS9D1-203ENST00000563798 NUP50Q9UKX7 468 aa14.44□□□□□ -0.1
VPS9D1-203ENST00000563798 TMCC3Q9ULS5 477 aa14.44□□□□□ -0.1
VPS9D1-203ENST00000563798 V9GYQ6 96 aa14.44□□□□□ -0.1
VPS9D1-203ENST00000563798 H0YL77 283 aa14.43□□□□□ -0.1
VPS9D1-203ENST00000563798 NOS3P29474 1203 aa14.43□□□□□ -0.1
VPS9D1-203ENST00000563798 RRM2P31350 389 aa14.43□□□□□ -0.1
VPS9D1-203ENST00000563798 UBA52P62987 128 aaKnown RBP14.43□□□□□ -0.1
VPS9D1-203ENST00000563798 GK2Q14410 553 aaPredicted RBP14.43□□□□□ -0.1
VPS9D1-203ENST00000563798 RPL13AP3Q6NVV1 102 aa14.43□□□□□ -0.1
VPS9D1-203ENST00000563798 PGBD2Q6P3X8 592 aa14.43□□□□□ -0.1
VPS9D1-203ENST00000563798 DOK3Q7L591 496 aa14.43□□□□□ -0.1
VPS9D1-203ENST00000563798 CPLX4Q7Z7G2 160 aa14.43□□□□□ -0.1
VPS9D1-203ENST00000563798 OR2AJ1Q8NGZ0 328 aa14.43□□□□□ -0.1
VPS9D1-203ENST00000563798 Q8TCH9 128 aa14.43□□□□□ -0.1
VPS9D1-203ENST00000563798 ERGIC1Q969X5 290 aa14.43□□□□□ -0.1
VPS9D1-203ENST00000563798 ZMYND19Q96E35 227 aaPredicted RBP14.43□□□□□ -0.1
VPS9D1-203ENST00000563798 PITX2Q99697 317 aa14.43□□□□□ -0.1
VPS9D1-203ENST00000563798 MRI1Q9BV20 369 aa14.43□□□□□ -0.1
VPS9D1-203ENST00000563798 TMEM100Q9NV29 134 aa14.43□□□□□ -0.1
VPS9D1-203ENST00000563798 MRPL22Q9NWU5 206 aaKnown RBP14.43□□□□□ -0.1
VPS9D1-203ENST00000563798 NDE1Q9NXR1 346 aa14.43□□□□□ -0.1
VPS9D1-203ENST00000563798 MIOXQ9UGB7 285 aa14.43□□□□□ -0.1
VPS9D1-203ENST00000563798 TAGLN3Q9UI15 199 aa14.43□□□□□ -0.1
VPS9D1-203ENST00000563798 LRRC30A6NM36 301 aa14.42□□□□□ -0.1
VPS9D1-203ENST00000563798 MSX2P35548 267 aaPredicted RBP14.42□□□□□ -0.1
VPS9D1-203ENST00000563798 PMELP40967 661 aa14.42□□□□□ -0.1
VPS9D1-203ENST00000563798 TRAP1Q12931 704 aaKnown RBP14.42□□□□□ -0.1
VPS9D1-203ENST00000563798 ZNF404Q494X3 552 aa14.42□□□□□ -0.1
VPS9D1-203ENST00000563798 ARMCX4Q5H9R4 360 aa14.42□□□□□ -0.1
VPS9D1-203ENST00000563798 ZNF362Q5T0B9 420 aaPredicted RBP14.42□□□□□ -0.1
VPS9D1-203ENST00000563798 ZSCAN2Q7Z7L9 614 aaPredicted RBP14.42□□□□□ -0.1
VPS9D1-203ENST00000563798 LINC00346Q8IVM7 164 aa14.42□□□□□ -0.1
VPS9D1-203ENST00000563798 ZDHHC21Q8IVQ6 265 aa14.42□□□□□ -0.1
VPS9D1-203ENST00000563798 C1orf87Q8N0U7 546 aa14.42□□□□□ -0.1
VPS9D1-203ENST00000563798 LINC00471Q8N535 108 aa14.42□□□□□ -0.1
VPS9D1-203ENST00000563798 SDR9C7Q8NEX9 313 aa14.42□□□□□ -0.1
VPS9D1-203ENST00000563798 ZNF420Q8TAQ5 688 aaPredicted RBP14.42□□□□□ -0.1
VPS9D1-203ENST00000563798 MAP6Q96JE9 813 aa14.42□□□□□ -0.1
VPS9D1-203ENST00000563798 CDADC1Q9BWV3 514 aa14.42□□□□□ -0.1
VPS9D1-203ENST00000563798 PLA2G12AQ9BZM1 189 aa14.42□□□□□ -0.1
VPS9D1-203ENST00000563798 TRIM15Q9C019 465 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms