RNA–Protein interactions for RNA: ENST00000561751.1

CDH1-203, Transcript of cadherin 1, humanhuman

TSL 4

Gene CDH1, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-203ENST00000561751 FAM166AQ6J272 317 aa6.53□□□□□ -1.36
CDH1-203ENST00000561751 ARHGAP11AQ6P4F7 1023 aa6.53□□□□□ -1.36
CDH1-203ENST00000561751 GDPD4Q6W3E5 623 aa6.53□□□□□ -1.36
CDH1-203ENST00000561751 Q6ZRG5 221 aa6.53□□□□□ -1.36
CDH1-203ENST00000561751 MTSS1LQ765P7 747 aa6.53□□□□□ -1.36
CDH1-203ENST00000561751 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.53□□□□□ -1.36
CDH1-203ENST00000561751 TMEM150AQ86TG1 271 aa6.53□□□□□ -1.36
CDH1-203ENST00000561751 LRRTM4Q86VH4 590 aa6.53□□□□□ -1.36
CDH1-203ENST00000561751 MRPL41Q8IXM3 137 aaKnown RBP6.53□□□□□ -1.36
CDH1-203ENST00000561751 C1orf87Q8N0U7 546 aa6.53□□□□□ -1.36
CDH1-203ENST00000561751 SLC35G3Q8N808 338 aa6.53□□□□□ -1.36
CDH1-203ENST00000561751 DTWD2Q8NBA8 298 aa6.53□□□□□ -1.36
CDH1-203ENST00000561751 TMEM104Q8NE00 496 aa6.53□□□□□ -1.36
CDH1-203ENST00000561751 CPEB3Q8NE35 698 aaKnown RBP6.53□□□□□ -1.36
CDH1-203ENST00000561751 ABHD5Q8WTS1 349 aa6.53□□□□□ -1.36
CDH1-203ENST00000561751 NEIL2Q969S2 332 aa6.53□□□□□ -1.36
CDH1-203ENST00000561751 SEH1LQ96EE3 360 aa6.53□□□□□ -1.36
CDH1-203ENST00000561751 TVP23CQ96ET8 276 aa6.53□□□□□ -1.36
CDH1-203ENST00000561751 DTD2Q96FN9 168 aa6.53□□□□□ -1.36
CDH1-203ENST00000561751 FAM46AQ96IP4 442 aaKnown RBP6.53□□□□□ -1.36
CDH1-203ENST00000561751 C2orf50Q96LR7 162 aa6.53□□□□□ -1.36
CDH1-203ENST00000561751 ADAD1Q96M93 576 aaKnown RBP6.53□□□□□ -1.36
CDH1-203ENST00000561751 GNRHR2Q96P88 292 aa6.53□□□□□ -1.36
CDH1-203ENST00000561751 MYADMQ96S97 322 aa6.53□□□□□ -1.36
CDH1-203ENST00000561751 PYGO2Q9BRQ0 406 aa6.53□□□□□ -1.36
CDH1-203ENST00000561751 GINS3Q9BRX5 216 aa6.53□□□□□ -1.36
CDH1-203ENST00000561751 OR52D1Q9H346 318 aa6.53□□□□□ -1.36
CDH1-203ENST00000561751 SRD5A3Q9H8P0 318 aa6.53□□□□□ -1.36
CDH1-203ENST00000561751 DMRT3Q9NQL9 472 aa6.53□□□□□ -1.36
CDH1-203ENST00000561751 CRLS1Q9UJA2 301 aa6.53□□□□□ -1.36
CDH1-203ENST00000561751 FOXD3Q9UJU5 478 aaPredicted RBP6.53□□□□□ -1.36
CDH1-203ENST00000561751 GNG8Q9UK08 70 aa6.53□□□□□ -1.36
CDH1-203ENST00000561751 GTF2A1LQ9UNN4 478 aa6.53□□□□□ -1.36
CDH1-203ENST00000561751 MRPS33Q9Y291 106 aaKnown RBP6.53□□□□□ -1.36
CDH1-203ENST00000561751 BDP1A6H8Y1 2624 aa6.53□□□□□ -1.36
CDH1-203ENST00000561751 ZNF106Q9H2Y7 1883 aaKnown RBP6.53□□□□□ -1.36
CDH1-203ENST00000561751 PRUNE2Q8WUY3 3088 aa6.53□□□□□ -1.36
CDH1-203ENST00000561751 BORCS7-ASMTA0A0B4J1R7 106 aa6.52□□□□□ -1.37
CDH1-203ENST00000561751 TRAV39A0A0B4J263 110 aa6.52□□□□□ -1.37
CDH1-203ENST00000561751 TRBV11-1A0A0K0K1C0 115 aa6.52□□□□□ -1.37
CDH1-203ENST00000561751 LOC100289279A0A1B0GTE1 492 aa6.52□□□□□ -1.37
CDH1-203ENST00000561751 C11orf97A0A1B0GVM6 126 aaPredicted RBP6.52□□□□□ -1.37
CDH1-203ENST00000561751 A0A1W2PPE2 198 aa6.52□□□□□ -1.37
CDH1-203ENST00000561751 TSPAN11A1L157 253 aa6.52□□□□□ -1.37
CDH1-203ENST00000561751 CLEC18AA5D8T8 446 aa6.52□□□□□ -1.37
CDH1-203ENST00000561751 MEGF11A6BM72 1044 aa6.52□□□□□ -1.37
CDH1-203ENST00000561751 FTCDNL1E5RQL4 147 aa6.52□□□□□ -1.37
CDH1-203ENST00000561751 NPIPA2E9PIF3 369 aa6.52□□□□□ -1.37
CDH1-203ENST00000561751 K7EPK0 472 aa6.52□□□□□ -1.37
CDH1-203ENST00000561751 SLC17A2O00624 439 aa6.52□□□□□ -1.37
CDH1-203ENST00000561751 SOCS5O75159 536 aa6.52□□□□□ -1.37
CDH1-203ENST00000561751 KAT7O95251 611 aa6.52□□□□□ -1.37
CDH1-203ENST00000561751 ETHE1O95571 254 aa6.52□□□□□ -1.37
CDH1-203ENST00000561751 DIRAS3O95661 229 aa6.52□□□□□ -1.37
CDH1-203ENST00000561751 SLC16A8O95907 504 aa6.52□□□□□ -1.37
CDH1-203ENST00000561751 EPPINO95925 133 aa6.52□□□□□ -1.37
CDH1-203ENST00000561751 CYB5AP00167 134 aa6.52□□□□□ -1.37
CDH1-203ENST00000561751 KNG1P01042 644 aa6.52□□□□□ -1.37
CDH1-203ENST00000561751 AMBPP02760 352 aa6.52□□□□□ -1.37
CDH1-203ENST00000561751 AMY2AP04746 511 aa6.52□□□□□ -1.37
CDH1-203ENST00000561751 HSPB1P04792 205 aaKnown RBP6.52□□□□□ -1.37
CDH1-203ENST00000561751 ARG1P05089 322 aa6.52□□□□□ -1.37
CDH1-203ENST00000561751 IL6RP08887 468 aaPredicted RBP6.52□□□□□ -1.37
CDH1-203ENST00000561751 SNRPCP09234 159 aaKnown RBP6.52□□□□□ -1.37
CDH1-203ENST00000561751 RAB6AP20340 208 aa6.52□□□□□ -1.37
CDH1-203ENST00000561751 TEAD1P28347 426 aa6.52□□□□□ -1.37
CDH1-203ENST00000561751 ACVRL1P37023 503 aa6.52□□□□□ -1.37
CDH1-203ENST00000561751 ADCYAP1R1P41586 468 aa6.52□□□□□ -1.37
CDH1-203ENST00000561751 DIO1P49895 249 aa6.52□□□□□ -1.37
CDH1-203ENST00000561751 MANFP55145 182 aaKnown RBP6.52□□□□□ -1.37
CDH1-203ENST00000561751 CASP9P55211 416 aa6.52□□□□□ -1.37
CDH1-203ENST00000561751 TAS2R50P59544 299 aa6.52□□□□□ -1.37
CDH1-203ENST00000561751 RPS13P62277 151 aaKnown RBP6.52□□□□□ -1.37
CDH1-203ENST00000561751 PAX5Q02548 391 aa6.52□□□□□ -1.37
CDH1-203ENST00000561751 LASP1Q14847 261 aaKnown RBP6.52□□□□□ -1.37
CDH1-203ENST00000561751 OR7A5Q15622 319 aa6.52□□□□□ -1.37
CDH1-203ENST00000561751 ATP6V1FQ16864 119 aa6.52□□□□□ -1.37
CDH1-203ENST00000561751 TMEM128Q5BJH2 165 aa6.52□□□□□ -1.37
CDH1-203ENST00000561751 BEX5Q5H9J7 111 aa6.52□□□□□ -1.37
CDH1-203ENST00000561751 RPS26P11Q5JNZ5 115 aaPredicted RBP6.52□□□□□ -1.37
CDH1-203ENST00000561751 CLEC12AQ5QGZ9 265 aa6.52□□□□□ -1.37
CDH1-203ENST00000561751 TMEM164Q5U3C3 297 aa6.52□□□□□ -1.37
CDH1-203ENST00000561751 GPR157Q5UAW9 335 aa6.52□□□□□ -1.37
CDH1-203ENST00000561751 SLC25A24Q6NUK1 477 aa6.52□□□□□ -1.37
CDH1-203ENST00000561751 FAAP20Q6NZ36 180 aa6.52□□□□□ -1.37
CDH1-203ENST00000561751 RPUSD3Q6P087 351 aaKnown RBP6.52□□□□□ -1.37
CDH1-203ENST00000561751 AGTRAPQ6RW13 159 aa6.52□□□□□ -1.37
CDH1-203ENST00000561751 SSX7Q7RTT5 188 aa6.52□□□□□ -1.37
CDH1-203ENST00000561751 NUFIP2Q7Z417 695 aaKnown RBP6.52□□□□□ -1.37
CDH1-203ENST00000561751 MDGA2Q7Z553 956 aa6.52□□□□□ -1.37
CDH1-203ENST00000561751 TMED4Q7Z7H5 227 aa6.52□□□□□ -1.37
CDH1-203ENST00000561751 JAGN1Q8N5M9 183 aa6.52□□□□□ -1.37
CDH1-203ENST00000561751 FAM71E2Q8N5Q1 922 aa6.52□□□□□ -1.37
CDH1-203ENST00000561751 SUMF2Q8NBJ7 301 aa6.52□□□□□ -1.37
CDH1-203ENST00000561751 CLEC18CQ8NCF0 446 aa6.52□□□□□ -1.37
CDH1-203ENST00000561751 NUDT10Q8NFP7 164 aa6.52□□□□□ -1.37
CDH1-203ENST00000561751 OR1P1Q8NH06 330 aa6.52□□□□□ -1.37
CDH1-203ENST00000561751 OR14L1PQ8NHC6 308 aa6.52□□□□□ -1.37
CDH1-203ENST00000561751 MAFAQ8NHW3 353 aaPredicted RBP6.52□□□□□ -1.37
CDH1-203ENST00000561751 HMGB4Q8WW32 186 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms