RNA–Protein interactions for RNA: ENST00000559340.1

LDLR-210, Transcript of low density lipoprotein receptor, humanhuman

TSL 5

Gene LDLR, Length 605 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-210ENST00000559340 NOX3Q9HBY0 568 aa8□□□□□ -1.13
LDLR-210ENST00000559340 FBXO9Q9UK97 447 aaPredicted RBP8□□□□□ -1.13
LDLR-210ENST00000559340 DIMT1Q9UNQ2 313 aaKnown RBP8□□□□□ -1.13
LDLR-210ENST00000559340 LOC100509620A0A075B734 347 aa7.99□□□□□ -1.13
LDLR-210ENST00000559340 A0A1W2PQL4 384 aaPredicted RBP7.99□□□□□ -1.13
LDLR-210ENST00000559340 H3BSA7 217 aa7.99□□□□□ -1.13
LDLR-210ENST00000559340 J3QRE1 110 aa7.99□□□□□ -1.13
LDLR-210ENST00000559340 RGS10O43665 173 aa7.99□□□□□ -1.13
LDLR-210ENST00000559340 XPNPEP2O43895 674 aa7.99□□□□□ -1.13
LDLR-210ENST00000559340 ICMTO60725 284 aa7.99□□□□□ -1.13
LDLR-210ENST00000559340 APOL3O95236 402 aa7.99□□□□□ -1.13
LDLR-210ENST00000559340 IGHA1P01876 353 aa7.99□□□□□ -1.13
LDLR-210ENST00000559340 LCATP04180 440 aa7.99□□□□□ -1.13
LDLR-210ENST00000559340 LCKP06239 509 aa7.99□□□□□ -1.13
LDLR-210ENST00000559340 NR4A1P22736 598 aa7.99□□□□□ -1.13
LDLR-210ENST00000559340 CFL1P23528 166 aaKnown RBP7.99□□□□□ -1.13
LDLR-210ENST00000559340 EEF1B2P24534 225 aaKnown RBP7.99□□□□□ -1.13
LDLR-210ENST00000559340 OPRL1P41146 370 aa7.99□□□□□ -1.13
LDLR-210ENST00000559340 PRKXP51817 358 aa7.99□□□□□ -1.13
LDLR-210ENST00000559340 GBX2P52951 348 aaPredicted RBP7.99□□□□□ -1.13
LDLR-210ENST00000559340 TLE4Q04727 773 aa7.99□□□□□ -1.13
LDLR-210ENST00000559340 DBPQ10586 325 aaPredicted RBP7.99□□□□□ -1.13
LDLR-210ENST00000559340 MALLQ13021 153 aa7.99□□□□□ -1.13
LDLR-210ENST00000559340 AKAP6Q13023 2319 aa7.99□□□□□ -1.13
LDLR-210ENST00000559340 ZNF718Q3SXZ3 478 aa7.99□□□□□ -1.13
LDLR-210ENST00000559340 ARFGEF3Q5TH69 2177 aa7.99□□□□□ -1.13
LDLR-210ENST00000559340 RNLSQ5VYX0 342 aa7.99□□□□□ -1.13
LDLR-210ENST00000559340 ZNF787Q6DD87 383 aa7.99□□□□□ -1.13
LDLR-210ENST00000559340 ADAM5Q6NVV9 412 aa7.99□□□□□ -1.13
LDLR-210ENST00000559340 LRRN1Q6UXK5 716 aa7.99□□□□□ -1.13
LDLR-210ENST00000559340 ZNF704Q6ZNC4 412 aaPredicted RBP7.99□□□□□ -1.13
LDLR-210ENST00000559340 AHSA2Q719I0 299 aa7.99□□□□□ -1.13
LDLR-210ENST00000559340 SPATC1Q76KD6 591 aa7.99□□□□□ -1.13
LDLR-210ENST00000559340 ZNF584Q8IVC4 421 aa7.99□□□□□ -1.13
LDLR-210ENST00000559340 SYS1Q8N2H4 156 aa7.99□□□□□ -1.13
LDLR-210ENST00000559340 KLHL36Q8N4N3 616 aa7.99□□□□□ -1.13
LDLR-210ENST00000559340 OR52H1Q8NGJ2 320 aa7.99□□□□□ -1.13
LDLR-210ENST00000559340 TMEM204Q9BSN7 226 aa7.99□□□□□ -1.13
LDLR-210ENST00000559340 ALG8Q9BVK2 526 aa7.99□□□□□ -1.13
LDLR-210ENST00000559340 OR10A2Q9H208 303 aa7.99□□□□□ -1.13
LDLR-210ENST00000559340 PNRC2Q9NPJ4 139 aaKnown RBP7.99□□□□□ -1.13
LDLR-210ENST00000559340 FAIMQ9NVQ4 179 aa7.99□□□□□ -1.13
LDLR-210ENST00000559340 ERVK13-1Q9NX77 482 aa7.99□□□□□ -1.13
LDLR-210ENST00000559340 GPR160Q9UJ42 338 aa7.99□□□□□ -1.13
LDLR-210ENST00000559340 COPS3Q9UNS2 423 aa7.99□□□□□ -1.13
LDLR-210ENST00000559340 ERGIC3Q9Y282 383 aa7.99□□□□□ -1.13
LDLR-210ENST00000559340 MYRFQ9Y2G1 1151 aa7.99□□□□□ -1.13
LDLR-210ENST00000559340 LRCH1Q9Y2L9 728 aa7.99□□□□□ -1.13
LDLR-210ENST00000559340 CAB39Q9Y376 341 aaPredicted RBP7.99□□□□□ -1.13
LDLR-210ENST00000559340 CMAHPQ9Y471 501 aa7.99□□□□□ -1.13
LDLR-210ENST00000559340 PCDHGB5Q9Y5G0 923 aa7.99□□□□□ -1.13
LDLR-210ENST00000559340 TMEM269A0A1B0GVZ9 245 aa7.98□□□□□ -1.13
LDLR-210ENST00000559340 FAM221AA4D161 298 aa7.98□□□□□ -1.13
LDLR-210ENST00000559340 ATP6V1G2-DDX39BF2Z307 99 aa7.98□□□□□ -1.13
LDLR-210ENST00000559340 MYL12BO14950 172 aa7.98□□□□□ -1.13
LDLR-210ENST00000559340 XRCC2O43543 280 aa7.98□□□□□ -1.13
LDLR-210ENST00000559340 CTAG2O75638 210 aa7.98□□□□□ -1.13
LDLR-210ENST00000559340 ATE1O95260 518 aa7.98□□□□□ -1.13
LDLR-210ENST00000559340 MT-ND5P03915 603 aa7.98□□□□□ -1.13
LDLR-210ENST00000559340 CDK1P06493 297 aa7.98□□□□□ -1.13
LDLR-210ENST00000559340 ANXA2P07355 339 aaKnown RBP7.98□□□□□ -1.13
LDLR-210ENST00000559340 ACSM4P0C7M7 580 aa7.98□□□□□ -1.13
LDLR-210ENST00000559340 BMP4P12644 408 aa7.98□□□□□ -1.13
LDLR-210ENST00000559340 CCL2P13500 99 aa7.98□□□□□ -1.13
LDLR-210ENST00000559340 CRHBPP24387 322 aa7.98□□□□□ -1.13
LDLR-210ENST00000559340 GCH1P30793 250 aa7.98□□□□□ -1.13
LDLR-210ENST00000559340 CALCRP30988 508 aa7.98□□□□□ -1.13
LDLR-210ENST00000559340 APOBEC3AP31941 199 aaPredicted RBP7.98□□□□□ -1.13
LDLR-210ENST00000559340 OTX1P32242 354 aaPredicted RBP7.98□□□□□ -1.13
LDLR-210ENST00000559340 CX3CR1P49238 355 aa7.98□□□□□ -1.13
LDLR-210ENST00000559340 FABP6P51161 128 aa7.98□□□□□ -1.13
LDLR-210ENST00000559340 GABARAPL2P60520 117 aa7.98□□□□□ -1.13
LDLR-210ENST00000559340 PPP1CBP62140 327 aa7.98□□□□□ -1.13
LDLR-210ENST00000559340 ZNF85Q03923 595 aa7.98□□□□□ -1.13
LDLR-210ENST00000559340 SNTB2Q13425 540 aaKnown RBP7.98□□□□□ -1.13
LDLR-210ENST00000559340 KRTAP27-1Q3LI81 207 aa7.98□□□□□ -1.13
LDLR-210ENST00000559340 CDONQ4KMG0 1287 aa7.98□□□□□ -1.13
LDLR-210ENST00000559340 RGS7BPQ6MZT1 257 aaPredicted RBP7.98□□□□□ -1.13
LDLR-210ENST00000559340 LHFPL3Q86UP9 236 aa7.98□□□□□ -1.13
LDLR-210ENST00000559340 TMEM200AQ86VY9 491 aa7.98□□□□□ -1.13
LDLR-210ENST00000559340 FBXL14Q8N1E6 418 aa7.98□□□□□ -1.13
LDLR-210ENST00000559340 SVOPQ8N4V2 548 aa7.98□□□□□ -1.13
LDLR-210ENST00000559340 OR10S1Q8NGN2 331 aa7.98□□□□□ -1.13
LDLR-210ENST00000559340 OR1J1Q8NGS3 322 aa7.98□□□□□ -1.13
LDLR-210ENST00000559340 ABHD4Q8TB40 342 aa7.98□□□□□ -1.13
LDLR-210ENST00000559340 SMAP2Q8WU79 429 aaPredicted RBP7.98□□□□□ -1.13
LDLR-210ENST00000559340 AKAP1Q92667 903 aaKnown RBP eCLIP7.98□□□□□ -1.13
LDLR-210ENST00000559340 MARVELD3Q96A59 401 aa7.98□□□□□ -1.13
LDLR-210ENST00000559340 PGAM5Q96HS1 289 aa7.98□□□□□ -1.13
LDLR-210ENST00000559340 DOK1Q99704 481 aa7.98□□□□□ -1.13
LDLR-210ENST00000559340 DHRS9Q9BPW9 319 aa7.98□□□□□ -1.13
LDLR-210ENST00000559340 C1QTNF5Q9BXJ0 243 aa7.98□□□□□ -1.13
LDLR-210ENST00000559340 RGCCQ9H4X1 137 aa7.98□□□□□ -1.13
LDLR-210ENST00000559340 DUSP21Q9H596 190 aa7.98□□□□□ -1.13
LDLR-210ENST00000559340 OPA3Q9H6K4 179 aa7.98□□□□□ -1.13
LDLR-210ENST00000559340 ZNF442Q9H7R0 627 aa7.98□□□□□ -1.13
LDLR-210ENST00000559340 MOB1AQ9H8S9 216 aa7.98□□□□□ -1.13
LDLR-210ENST00000559340 FKBP14Q9NWM8 211 aa7.98□□□□□ -1.13
LDLR-210ENST00000559340 SLCO1C1Q9NYB5 712 aa7.98□□□□□ -1.13
LDLR-210ENST00000559340 CISD1Q9NZ45 108 aaKnown RBP7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms