RNA–Protein interactions for RNA: ENST00000558867.1

CDC42BPB-203, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 635 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-203ENST00000558867 ZNF229Q9UJW7 825 aa13.71□□□□□ -0.21
CDC42BPB-203ENST00000558867 DIMT1Q9UNQ2 313 aaKnown RBP13.71□□□□□ -0.21
CDC42BPB-203ENST00000558867 LOC105371242A0A075B767 164 aa13.7□□□□□ -0.22
CDC42BPB-203ENST00000558867 SLC22A23A1A5C7 686 aa13.7□□□□□ -0.22
CDC42BPB-203ENST00000558867 IMPA2O14732 288 aa13.7□□□□□ -0.22
CDC42BPB-203ENST00000558867 MPZL1O95297 269 aa13.7□□□□□ -0.22
CDC42BPB-203ENST00000558867 HLA-HP01893 362 aa13.7□□□□□ -0.22
CDC42BPB-203ENST00000558867 ASAH2BP0C7U1 165 aa13.7□□□□□ -0.22
CDC42BPB-203ENST00000558867 ZNF35P13682 527 aa13.7□□□□□ -0.22
CDC42BPB-203ENST00000558867 C21orf33P30042 268 aaPredicted RBP13.7□□□□□ -0.22
CDC42BPB-203ENST00000558867 HTR1FP30939 366 aa13.7□□□□□ -0.22
CDC42BPB-203ENST00000558867 LMO4P61968 165 aa13.7□□□□□ -0.22
CDC42BPB-203ENST00000558867 MFSD13AQ14CX5 517 aa13.7□□□□□ -0.22
CDC42BPB-203ENST00000558867 NKPD1Q17RQ9 610 aa13.7□□□□□ -0.22
CDC42BPB-203ENST00000558867 CLEC12AQ5QGZ9 265 aa13.7□□□□□ -0.22
CDC42BPB-203ENST00000558867 ZNF813Q6ZN06 617 aa13.7□□□□□ -0.22
CDC42BPB-203ENST00000558867 DPY19L2P2Q6ZN68 376 aa13.7□□□□□ -0.22
CDC42BPB-203ENST00000558867 H1FNTQ75WM6 255 aaPredicted RBP13.7□□□□□ -0.22
CDC42BPB-203ENST00000558867 ZNF367Q7RTV3 350 aa13.7□□□□□ -0.22
CDC42BPB-203ENST00000558867 C1QL2Q7Z5L3 287 aa13.7□□□□□ -0.22
CDC42BPB-203ENST00000558867 UEVLDQ8IX04 471 aa13.7□□□□□ -0.22
CDC42BPB-203ENST00000558867 SNX33Q8WV41 574 aa13.7□□□□□ -0.22
CDC42BPB-203ENST00000558867 OR2M2Q96R28 347 aa13.7□□□□□ -0.22
CDC42BPB-203ENST00000558867 ZNF747Q9BV97 191 aa13.7□□□□□ -0.22
CDC42BPB-203ENST00000558867 ZNF665Q9H7R5 613 aa13.7□□□□□ -0.22
CDC42BPB-203ENST00000558867 AMBNQ9NP70 447 aa13.7□□□□□ -0.22
CDC42BPB-203ENST00000558867 B3GNT2Q9NY97 397 aa13.7□□□□□ -0.22
CDC42BPB-203ENST00000558867 KLHL21Q9UJP4 597 aa13.7□□□□□ -0.22
CDC42BPB-203ENST00000558867 TRAV36DV7A0A075B6V5 113 aa13.69□□□□□ -0.22
CDC42BPB-203ENST00000558867 TRAV27A0A087WT01 109 aa13.69□□□□□ -0.22
CDC42BPB-203ENST00000558867 LOC102725191A0A1B0GVB3 256 aa13.69□□□□□ -0.22
CDC42BPB-203ENST00000558867 FTCDNL1E5RQL4 147 aa13.69□□□□□ -0.22
CDC42BPB-203ENST00000558867 INMTO95050 263 aa13.69□□□□□ -0.22
CDC42BPB-203ENST00000558867 UBL3O95164 117 aa13.69□□□□□ -0.22
CDC42BPB-203ENST00000558867 FADS2O95864 444 aaKnown RBP13.69□□□□□ -0.22
CDC42BPB-203ENST00000558867 GATA3P23771 443 aa13.69□□□□□ -0.22
CDC42BPB-203ENST00000558867 MTNR1AP48039 350 aa13.69□□□□□ -0.22
CDC42BPB-203ENST00000558867 CAMK2DQ13557 499 aa13.69□□□□□ -0.22
CDC42BPB-203ENST00000558867 MOGQ16653 247 aa13.69□□□□□ -0.22
CDC42BPB-203ENST00000558867 PCGF3Q3KNV8 242 aa13.69□□□□□ -0.22
CDC42BPB-203ENST00000558867 FAM69AQ5T7M9 428 aa13.69□□□□□ -0.22
CDC42BPB-203ENST00000558867 DCAF12L2Q5VW00 463 aa13.69□□□□□ -0.22
CDC42BPB-203ENST00000558867 YIPF6Q96EC8 236 aa13.69□□□□□ -0.22
CDC42BPB-203ENST00000558867 IFT27Q9BW83 186 aa13.69□□□□□ -0.22
CDC42BPB-203ENST00000558867 NRIP3Q9NQ35 241 aa13.69□□□□□ -0.22
CDC42BPB-203ENST00000558867 EXOGQ9Y2C4 368 aaKnown RBP13.69□□□□□ -0.22
CDC42BPB-203ENST00000558867 ZNF503-AS2A6NEH8 195 aa13.68□□□□□ -0.22
CDC42BPB-203ENST00000558867 CCDC160A6NGH7 325 aa13.68□□□□□ -0.22
CDC42BPB-203ENST00000558867 ZNF726A6NNF4 738 aa13.68□□□□□ -0.22
CDC42BPB-203ENST00000558867 RIIAD1A6NNX1 92 aa13.68□□□□□ -0.22
CDC42BPB-203ENST00000558867 NOL3O60936 208 aaKnown RBP13.68□□□□□ -0.22
CDC42BPB-203ENST00000558867 GABARAPO95166 117 aa13.68□□□□□ -0.22
CDC42BPB-203ENST00000558867 TXNDC12O95881 172 aa13.68□□□□□ -0.22
CDC42BPB-203ENST00000558867 CH25HO95992 272 aa13.68□□□□□ -0.22
CDC42BPB-203ENST00000558867 IFNGP01579 166 aa13.68□□□□□ -0.22
CDC42BPB-203ENST00000558867 BGLAPP02818 100 aa13.68□□□□□ -0.22
CDC42BPB-203ENST00000558867 MT-ND5P03915 603 aa13.68□□□□□ -0.22
CDC42BPB-203ENST00000558867 ADORA3P0DMS8 318 aa13.68□□□□□ -0.22
CDC42BPB-203ENST00000558867 ZNF14P17017 642 aaPredicted RBP13.68□□□□□ -0.22
CDC42BPB-203ENST00000558867 GSTT1P30711 240 aa13.68□□□□□ -0.22
CDC42BPB-203ENST00000558867 RAD52P43351 418 aa13.68□□□□□ -0.22
CDC42BPB-203ENST00000558867 MAP2K4P45985 399 aa13.68□□□□□ -0.22
CDC42BPB-203ENST00000558867 RAB1AP62820 205 aa13.68□□□□□ -0.22
CDC42BPB-203ENST00000558867 ZNF362Q5T0B9 420 aaPredicted RBP13.68□□□□□ -0.22
CDC42BPB-203ENST00000558867 GPR107Q5VW38 600 aa13.68□□□□□ -0.22
CDC42BPB-203ENST00000558867 ERI1Q8IV48 349 aaKnown RBP13.68□□□□□ -0.22
CDC42BPB-203ENST00000558867 C20orf196Q8IYI0 205 aa13.68□□□□□ -0.22
CDC42BPB-203ENST00000558867 PROKR2Q8NFJ6 384 aa13.68□□□□□ -0.22
CDC42BPB-203ENST00000558867 OR51A7Q8NH64 312 aa13.68□□□□□ -0.22
CDC42BPB-203ENST00000558867 YIPF5Q969M3 257 aa13.68□□□□□ -0.22
CDC42BPB-203ENST00000558867 C12orf43Q96C57 262 aaKnown RBP13.68□□□□□ -0.22
CDC42BPB-203ENST00000558867 LGALS12Q96DT0 336 aa13.68□□□□□ -0.22
CDC42BPB-203ENST00000558867 ZNF837Q96EG3 531 aaPredicted RBP13.68□□□□□ -0.22
CDC42BPB-203ENST00000558867 KTI12Q96EK9 354 aaPredicted RBP13.68□□□□□ -0.22
CDC42BPB-203ENST00000558867 TIMD4Q96H15 378 aa13.68□□□□□ -0.22
CDC42BPB-203ENST00000558867 MS4A3Q96HJ5 214 aa13.68□□□□□ -0.22
CDC42BPB-203ENST00000558867 COG8Q96MW5 612 aa13.68□□□□□ -0.22
CDC42BPB-203ENST00000558867 HINT3Q9NQE9 182 aaKnown RBP13.68□□□□□ -0.22
CDC42BPB-203ENST00000558867 G6PC2Q9NQR9 355 aa13.68□□□□□ -0.22
CDC42BPB-203ENST00000558867 NANSQ9NR45 359 aa13.68□□□□□ -0.22
CDC42BPB-203ENST00000558867 SLCO1C1Q9NYB5 712 aa13.68□□□□□ -0.22
CDC42BPB-203ENST00000558867 HAO2Q9NYQ3 351 aa13.68□□□□□ -0.22
CDC42BPB-203ENST00000558867 B3GAT1Q9P2W7 334 aa13.68□□□□□ -0.22
CDC42BPB-203ENST00000558867 WARS2Q9UGM6 360 aaKnown RBP13.68□□□□□ -0.22
CDC42BPB-203ENST00000558867 ENPP5Q9UJA9 477 aa13.68□□□□□ -0.22
CDC42BPB-203ENST00000558867 EXOSC1Q9Y3B2 195 aaKnown RBP13.68□□□□□ -0.22
CDC42BPB-203ENST00000558867 TGP01266 2768 aa13.67□□□□□ -0.22
CDC42BPB-203ENST00000558867 SLC22A31A6NKX4 558 aa13.67□□□□□ -0.22
CDC42BPB-203ENST00000558867 H3BMQ9 156 aa13.67□□□□□ -0.22
CDC42BPB-203ENST00000558867 M0R082 166 aa13.67□□□□□ -0.22
CDC42BPB-203ENST00000558867 TMPRSS2O15393 492 aa13.67□□□□□ -0.22
CDC42BPB-203ENST00000558867 NAT2P11245 290 aa13.67□□□□□ -0.22
CDC42BPB-203ENST00000558867 ZNF3P17036 446 aa13.67□□□□□ -0.22
CDC42BPB-203ENST00000558867 PDLIM3Q53GG5 364 aaPredicted RBP13.67□□□□□ -0.22
CDC42BPB-203ENST00000558867 CARD17Q5XLA6 110 aa13.67□□□□□ -0.22
CDC42BPB-203ENST00000558867 RGS7BPQ6MZT1 257 aaPredicted RBP13.67□□□□□ -0.22
CDC42BPB-203ENST00000558867 ZNF627Q7L945 461 aa13.67□□□□□ -0.22
CDC42BPB-203ENST00000558867 TMEM123Q8N131 208 aa13.67□□□□□ -0.22
CDC42BPB-203ENST00000558867 LRRC75AQ8NAA5 344 aa13.67□□□□□ -0.22
CDC42BPB-203ENST00000558867 ADPRHL1Q8NDY3 354 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms