RNA–Protein interactions for RNA: ENST00000558855.5

VPS18-203, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS18, Length 1,050 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-203ENST00000558855 ATP6V1B2P21281 511 aa11.35□□□□□ -0.59
VPS18-203ENST00000558855 PRDX6P30041 224 aa11.35□□□□□ -0.59
VPS18-203ENST00000558855 RRM2P31350 389 aa11.35□□□□□ -0.59
VPS18-203ENST00000558855 PYCR1P32322 319 aa11.35□□□□□ -0.59
VPS18-203ENST00000558855 CD80P33681 288 aa11.35□□□□□ -0.59
VPS18-203ENST00000558855 GGT2P36268 569 aa11.35□□□□□ -0.59
VPS18-203ENST00000558855 RPS6KA3P51812 740 aa11.35□□□□□ -0.59
VPS18-203ENST00000558855 SLC3A1Q07837 685 aa11.35□□□□□ -0.59
VPS18-203ENST00000558855 PPP1R8Q12972 351 aaKnown RBP11.35□□□□□ -0.59
VPS18-203ENST00000558855 ZNF154Q13106 437 aa11.35□□□□□ -0.59
VPS18-203ENST00000558855 RFX4Q33E94 735 aa11.35□□□□□ -0.59
VPS18-203ENST00000558855 SLC35F1Q5T1Q4 408 aa11.35□□□□□ -0.59
VPS18-203ENST00000558855 PGBD2Q6P3X8 592 aa11.35□□□□□ -0.59
VPS18-203ENST00000558855 LYPD2Q6UXB3 125 aa11.35□□□□□ -0.59
VPS18-203ENST00000558855 MOGAT3Q86VF5 341 aa11.35□□□□□ -0.59
VPS18-203ENST00000558855 ATG16L2Q8NAA4 619 aa11.35□□□□□ -0.59
VPS18-203ENST00000558855 OR8G5Q8NG78 346 aa11.35□□□□□ -0.59
VPS18-203ENST00000558855 OR9Q2Q8NGE9 314 aa11.35□□□□□ -0.59
VPS18-203ENST00000558855 NANPQ8TBE9 248 aa11.35□□□□□ -0.59
VPS18-203ENST00000558855 ST7LQ8TDW4 575 aa11.35□□□□□ -0.59
VPS18-203ENST00000558855 PYURFQ96I23 114 aa11.35□□□□□ -0.59
VPS18-203ENST00000558855 MAP6Q96JE9 813 aa11.35□□□□□ -0.59
VPS18-203ENST00000558855 DDOQ99489 341 aa11.35□□□□□ -0.59
VPS18-203ENST00000558855 COQ7Q99807 217 aa11.35□□□□□ -0.59
VPS18-203ENST00000558855 SLC30A2Q9BRI3 323 aa11.35□□□□□ -0.59
VPS18-203ENST00000558855 TMEM165Q9HC07 324 aa11.35□□□□□ -0.59
VPS18-203ENST00000558855 MED4Q9NPJ6 270 aa11.35□□□□□ -0.59
VPS18-203ENST00000558855 VNN3Q9NY84 501 aa11.35□□□□□ -0.59
VPS18-203ENST00000558855 ATPIF1Q9UII2 106 aa11.35□□□□□ -0.59
VPS18-203ENST00000558855 SAMD4AQ9UPU9 718 aaKnown RBP11.35□□□□□ -0.59
VPS18-203ENST00000558855 FAM32AQ9Y421 112 aaKnown RBP11.35□□□□□ -0.59
VPS18-203ENST00000558855 PPIAL4EA0A075B759 164 aa11.34□□□□□ -0.59
VPS18-203ENST00000558855 PPIAL4CA0A0B4J2A2 164 aa11.34□□□□□ -0.59
VPS18-203ENST00000558855 MDFIC2A0A1B0GVS7 189 aa11.34□□□□□ -0.59
VPS18-203ENST00000558855 IQCF6A8MYZ5 107 aa11.34□□□□□ -0.59
VPS18-203ENST00000558855 PPIAL4DF5H284 164 aa11.34□□□□□ -0.59
VPS18-203ENST00000558855 ARPC3O15145 178 aa11.34□□□□□ -0.59
VPS18-203ENST00000558855 FOXH1O75593 365 aa11.34□□□□□ -0.59
VPS18-203ENST00000558855 FCN3O75636 299 aa11.34□□□□□ -0.59
VPS18-203ENST00000558855 WNT2P09544 360 aa11.34□□□□□ -0.59
VPS18-203ENST00000558855 PPIAL4FP0DN26 164 aa11.34□□□□□ -0.59
VPS18-203ENST00000558855 IGHV4-38-2P0DP08 117 aa11.34□□□□□ -0.59
VPS18-203ENST00000558855 HSD17B1P14061 328 aa11.34□□□□□ -0.59
VPS18-203ENST00000558855 FPR3P25089 353 aa11.34□□□□□ -0.59
VPS18-203ENST00000558855 MAB21L1Q13394 359 aa11.34□□□□□ -0.59
VPS18-203ENST00000558855 ZNF362Q5T0B9 420 aaPredicted RBP11.34□□□□□ -0.59
VPS18-203ENST00000558855 PRAMEF6Q5VXH4 476 aa11.34□□□□□ -0.59
VPS18-203ENST00000558855 ZNF620Q6ZNG0 422 aa11.34□□□□□ -0.59
VPS18-203ENST00000558855 ZBTB46Q86UZ6 589 aa11.34□□□□□ -0.59
VPS18-203ENST00000558855 BPIFB2Q8N4F0 458 aa11.34□□□□□ -0.59
VPS18-203ENST00000558855 CYB561A3Q8NBI2 242 aa11.34□□□□□ -0.59
VPS18-203ENST00000558855 CMTM5Q96DZ9 223 aa11.34□□□□□ -0.59
VPS18-203ENST00000558855 TMEM246Q9BRR3 403 aa11.34□□□□□ -0.59
VPS18-203ENST00000558855 BTBD10Q9BSF8 475 aa11.34□□□□□ -0.59
VPS18-203ENST00000558855 SUCNR1Q9BXA5 334 aa11.34□□□□□ -0.59
VPS18-203ENST00000558855 HDHD2Q9H0R4 259 aa11.34□□□□□ -0.59
VPS18-203ENST00000558855 MEGF8Q7Z7M0 2845 aa11.33□□□□□ -0.6
VPS18-203ENST00000558855 DNAJC9-AS1A6NH13 148 aa11.33□□□□□ -0.6
VPS18-203ENST00000558855 TVP23AA6NH52 213 aa11.33□□□□□ -0.6
VPS18-203ENST00000558855 TRIM77I1YAP6 450 aa11.33□□□□□ -0.6
VPS18-203ENST00000558855 TNFRSF1AP19438 455 aa11.33□□□□□ -0.6
VPS18-203ENST00000558855 TNFSF4P23510 183 aa11.33□□□□□ -0.6
VPS18-203ENST00000558855 GATA3P23771 443 aa11.33□□□□□ -0.6
VPS18-203ENST00000558855 SLC6A6P31641 620 aa11.33□□□□□ -0.6
VPS18-203ENST00000558855 GK2Q14410 553 aaPredicted RBP11.33□□□□□ -0.6
VPS18-203ENST00000558855 MPPED2Q15777 294 aa11.33□□□□□ -0.6
VPS18-203ENST00000558855 SNAI3Q3KNW1 292 aa11.33□□□□□ -0.6
VPS18-203ENST00000558855 HSP90B2PQ58FF3 399 aa11.33□□□□□ -0.6
VPS18-203ENST00000558855 AWAT1Q58HT5 328 aa11.33□□□□□ -0.6
VPS18-203ENST00000558855 CLEC12AQ5QGZ9 265 aa11.33□□□□□ -0.6
VPS18-203ENST00000558855 PGAM4Q8N0Y7 254 aa11.33□□□□□ -0.6
VPS18-203ENST00000558855 SPICQ8N5J4 248 aa11.33□□□□□ -0.6
VPS18-203ENST00000558855 GJC3Q8NFK1 279 aa11.33□□□□□ -0.6
VPS18-203ENST00000558855 OR52E2Q8NGJ4 325 aa11.33□□□□□ -0.6
VPS18-203ENST00000558855 GCDHQ92947 438 aaPredicted RBP11.33□□□□□ -0.6
VPS18-203ENST00000558855 APOBEC3DQ96AK3 386 aaPredicted RBP11.33□□□□□ -0.6
VPS18-203ENST00000558855 CDRT15Q96T59 188 aa11.33□□□□□ -0.6
VPS18-203ENST00000558855 IFT27Q9BW83 186 aa11.33□□□□□ -0.6
VPS18-203ENST00000558855 CYB5R1Q9UHQ9 305 aa11.33□□□□□ -0.6
VPS18-203ENST00000558855 AUP1Q9Y679 476 aa11.33□□□□□ -0.6
VPS18-203ENST00000558855 F5H5K5 113 aa11.32□□□□□ -0.6
VPS18-203ENST00000558855 BHLHE40O14503 412 aa11.32□□□□□ -0.6
VPS18-203ENST00000558855 NDUFAB1O14561 156 aa11.32□□□□□ -0.6
VPS18-203ENST00000558855 OR10H3O60404 316 aa11.32□□□□□ -0.6
VPS18-203ENST00000558855 TUBG1P23258 451 aa11.32□□□□□ -0.6
VPS18-203ENST00000558855 CRABP1P29762 137 aa11.32□□□□□ -0.6
VPS18-203ENST00000558855 MDH2P40926 338 aaKnown RBP11.32□□□□□ -0.6
VPS18-203ENST00000558855 RGS6P49758 472 aa11.32□□□□□ -0.6
VPS18-203ENST00000558855 RAD23AP54725 363 aa11.32□□□□□ -0.6
VPS18-203ENST00000558855 PAX8Q06710 450 aa11.32□□□□□ -0.6
VPS18-203ENST00000558855 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.32□□□□□ -0.6
VPS18-203ENST00000558855 TRAP1Q12931 704 aaKnown RBP11.32□□□□□ -0.6
VPS18-203ENST00000558855 ARMCX4Q5H9R4 360 aa11.32□□□□□ -0.6
VPS18-203ENST00000558855 ZNF770Q6IQ21 691 aaPredicted RBP11.32□□□□□ -0.6
VPS18-203ENST00000558855 DOK3Q7L591 496 aa11.32□□□□□ -0.6
VPS18-203ENST00000558855 KLBQ86Z14 1044 aa11.32□□□□□ -0.6
VPS18-203ENST00000558855 ZDHHC21Q8IVQ6 265 aa11.32□□□□□ -0.6
VPS18-203ENST00000558855 KLHL36Q8N4N3 616 aa11.32□□□□□ -0.6
VPS18-203ENST00000558855 OR51L1Q8NGJ5 315 aa11.32□□□□□ -0.6
VPS18-203ENST00000558855 OR4C15Q8NGM1 316 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms