RNA–Protein interactions for RNA: ENST00000558745.5

TSPAN3-205, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,340 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-205ENST00000558745 UBASH3BQ8TF42 649 aa11.8□□□□□ -0.52
TSPAN3-205ENST00000558745 NEU4Q8WWR8 484 aaPredicted RBP11.8□□□□□ -0.52
TSPAN3-205ENST00000558745 DNAJC9Q8WXX5 260 aa11.8□□□□□ -0.52
TSPAN3-205ENST00000558745 SLAMF6Q96DU3 332 aa11.8□□□□□ -0.52
TSPAN3-205ENST00000558745 RAB3IPQ96QF0 476 aaPredicted RBP11.8□□□□□ -0.52
TSPAN3-205ENST00000558745 ATF6BQ99941 703 aa11.8□□□□□ -0.52
TSPAN3-205ENST00000558745 RIBC2Q9H4K1 309 aa11.8□□□□□ -0.52
TSPAN3-205ENST00000558745 MSL2Q9HCI7 577 aa11.8□□□□□ -0.52
TSPAN3-205ENST00000558745 SLCO1C1Q9NYB5 712 aa11.8□□□□□ -0.52
TSPAN3-205ENST00000558745 CR1P17927 2039 aa11.79□□□□□ -0.52
TSPAN3-205ENST00000558745 A0A096LNT2 108 aa11.79□□□□□ -0.52
TSPAN3-205ENST00000558745 ZSCAN5BA6NJL1 495 aa11.79□□□□□ -0.52
TSPAN3-205ENST00000558745 ZAR1LA6NP61 321 aa11.79□□□□□ -0.52
TSPAN3-205ENST00000558745 TLX2O43763 284 aaPredicted RBP11.79□□□□□ -0.52
TSPAN3-205ENST00000558745 CDC14BO60729 498 aa11.79□□□□□ -0.52
TSPAN3-205ENST00000558745 LCATP04180 440 aa11.79□□□□□ -0.52
TSPAN3-205ENST00000558745 SLC2A1P11166 492 aa11.79□□□□□ -0.52
TSPAN3-205ENST00000558745 PAICSP22234 425 aaKnown RBP11.79□□□□□ -0.52
TSPAN3-205ENST00000558745 SLC2A5P22732 501 aa11.79□□□□□ -0.52
TSPAN3-205ENST00000558745 NAA10P41227 235 aaPredicted RBP11.79□□□□□ -0.52
TSPAN3-205ENST00000558745 CCL8P80075 99 aa11.79□□□□□ -0.52
TSPAN3-205ENST00000558745 APOFQ13790 326 aa11.79□□□□□ -0.52
TSPAN3-205ENST00000558745 TEX30Q5JUR7 227 aa11.79□□□□□ -0.52
TSPAN3-205ENST00000558745 OR2T2Q6IF00 324 aa11.79□□□□□ -0.52
TSPAN3-205ENST00000558745 CLEC9AQ6UXN8 241 aa11.79□□□□□ -0.52
TSPAN3-205ENST00000558745 OR5AS1Q8N127 324 aa11.79□□□□□ -0.52
TSPAN3-205ENST00000558745 ST7LQ8TDW4 575 aa11.79□□□□□ -0.52
TSPAN3-205ENST00000558745 YIPF5Q969M3 257 aa11.79□□□□□ -0.52
TSPAN3-205ENST00000558745 IL4I1Q96RQ9 567 aa11.79□□□□□ -0.52
TSPAN3-205ENST00000558745 DCLRE1CQ96SD1 692 aaKnown RBP11.79□□□□□ -0.52
TSPAN3-205ENST00000558745 INTS14Q96SY0 518 aa11.79□□□□□ -0.52
TSPAN3-205ENST00000558745 SLC29A1Q99808 456 aa11.79□□□□□ -0.52
TSPAN3-205ENST00000558745 MARCH7Q9H992 704 aa11.79□□□□□ -0.52
TSPAN3-205ENST00000558745 TREM2Q9NZC2 230 aa11.79□□□□□ -0.52
TSPAN3-205ENST00000558745 KLHDC2Q9Y2U9 406 aa11.79□□□□□ -0.52
TSPAN3-205ENST00000558745 CCDC182A6NF36 153 aa11.78□□□□□ -0.52
TSPAN3-205ENST00000558745 VWC2LB2RUY7 222 aa11.78□□□□□ -0.52
TSPAN3-205ENST00000558745 EI24O14681 340 aa11.78□□□□□ -0.52
TSPAN3-205ENST00000558745 TIMM8AO60220 97 aaPredicted RBP11.78□□□□□ -0.52
TSPAN3-205ENST00000558745 BAG2O95816 211 aa11.78□□□□□ -0.52
TSPAN3-205ENST00000558745 IGHV1-46P01743 117 aa11.78□□□□□ -0.52
TSPAN3-205ENST00000558745 MRPL3P09001 348 aaKnown RBP11.78□□□□□ -0.52
TSPAN3-205ENST00000558745 ZNF81P51508 661 aa11.78□□□□□ -0.52
TSPAN3-205ENST00000558745 DSCR9P59020 149 aa11.78□□□□□ -0.52
TSPAN3-205ENST00000558745 EFNB1P98172 346 aa11.78□□□□□ -0.52
TSPAN3-205ENST00000558745 GGTLC2Q14390 218 aa11.78□□□□□ -0.52
TSPAN3-205ENST00000558745 TAF13Q15543 124 aa11.78□□□□□ -0.52
TSPAN3-205ENST00000558745 C12orf73Q69YU5 71 aa11.78□□□□□ -0.52
TSPAN3-205ENST00000558745 ZFP1Q6P2D0 407 aa11.78□□□□□ -0.52
TSPAN3-205ENST00000558745 UNQ6126/PRO20091Q6UXV3 157 aa11.78□□□□□ -0.52
TSPAN3-205ENST00000558745 Q6ZR03 302 aa11.78□□□□□ -0.52
TSPAN3-205ENST00000558745 COLCA1Q6ZS62 124 aa11.78□□□□□ -0.52
TSPAN3-205ENST00000558745 BIVMQ86UB2 503 aa11.78□□□□□ -0.52
TSPAN3-205ENST00000558745 ZNF786Q8N393 782 aa11.78□□□□□ -0.52
TSPAN3-205ENST00000558745 SNX33Q8WV41 574 aa11.78□□□□□ -0.52
TSPAN3-205ENST00000558745 UBE2FQ969M7 185 aa11.78□□□□□ -0.52
TSPAN3-205ENST00000558745 APOBEC3DQ96AK3 386 aaPredicted RBP11.78□□□□□ -0.52
TSPAN3-205ENST00000558745 HAVCR1Q96D42 359 aa11.78□□□□□ -0.52
TSPAN3-205ENST00000558745 TEAD3Q99594 435 aa11.78□□□□□ -0.52
TSPAN3-205ENST00000558745 COPS4Q9BT78 406 aa11.78□□□□□ -0.52
TSPAN3-205ENST00000558745 ABHD6Q9BV23 337 aa11.78□□□□□ -0.52
TSPAN3-205ENST00000558745 C1QTNF5Q9BXJ0 243 aa11.78□□□□□ -0.52
TSPAN3-205ENST00000558745 ATPIF1Q9UII2 106 aa11.78□□□□□ -0.52
TSPAN3-205ENST00000558745 PURGQ9UJV8 347 aaKnown RBP11.78□□□□□ -0.52
TSPAN3-205ENST00000558745 CACNG2Q9Y698 323 aa11.78□□□□□ -0.52
TSPAN3-205ENST00000558745 LOC390937A0A1W2PQ73 354 aa11.77□□□□□ -0.53
TSPAN3-205ENST00000558745 M0R135 149 aa11.77□□□□□ -0.53
TSPAN3-205ENST00000558745 TPD52L2O43399 206 aaKnown RBP11.77□□□□□ -0.53
TSPAN3-205ENST00000558745 LILRA1O75019 489 aa11.77□□□□□ -0.53
TSPAN3-205ENST00000558745 ERCC1P07992 297 aaPredicted RBP11.77□□□□□ -0.53
TSPAN3-205ENST00000558745 RGS6P49758 472 aa11.77□□□□□ -0.53
TSPAN3-205ENST00000558745 BLVRAP53004 296 aa11.77□□□□□ -0.53
TSPAN3-205ENST00000558745 TPTEP56180 551 aa11.77□□□□□ -0.53
TSPAN3-205ENST00000558745 KRTAP1-1Q07627 177 aa11.77□□□□□ -0.53
TSPAN3-205ENST00000558745 ECH1Q13011 328 aa11.77□□□□□ -0.53
TSPAN3-205ENST00000558745 TRIP10Q15642 601 aa11.77□□□□□ -0.53
TSPAN3-205ENST00000558745 SNAI3Q3KNW1 292 aa11.77□□□□□ -0.53
TSPAN3-205ENST00000558745 CBR4Q8N4T8 237 aa11.77□□□□□ -0.53
TSPAN3-205ENST00000558745 THEM6Q8WUY1 208 aa11.77□□□□□ -0.53
TSPAN3-205ENST00000558745 ZNF799Q96GE5 643 aa11.77□□□□□ -0.53
TSPAN3-205ENST00000558745 RBM4BQ9BQ04 359 aaKnown RBP11.77□□□□□ -0.53
TSPAN3-205ENST00000558745 TEX12Q9BXU0 123 aa11.77□□□□□ -0.53
TSPAN3-205ENST00000558745 BPESC1Q9GZL8 116 aa11.77□□□□□ -0.53
TSPAN3-205ENST00000558745 DDX28Q9NUL7 540 aaKnown RBP11.77□□□□□ -0.53
TSPAN3-205ENST00000558745 FBXO9Q9UK97 447 aaPredicted RBP11.77□□□□□ -0.53
TSPAN3-205ENST00000558745 TLN2Q9Y4G6 2542 aa11.76□□□□□ -0.53
TSPAN3-205ENST00000558745 ZANQ9Y493 2812 aa11.76□□□□□ -0.53
TSPAN3-205ENST00000558745 IGHV4-61A0A0C4DH41 118 aa11.76□□□□□ -0.53
TSPAN3-205ENST00000558745 LRP5LA4QPB2 252 aa11.76□□□□□ -0.53
TSPAN3-205ENST00000558745 H0YL77 283 aa11.76□□□□□ -0.53
TSPAN3-205ENST00000558745 PSMD9O00233 223 aa11.76□□□□□ -0.53
TSPAN3-205ENST00000558745 PRODHO43272 600 aa11.76□□□□□ -0.53
TSPAN3-205ENST00000558745 ALPLP05186 524 aa11.76□□□□□ -0.53
TSPAN3-205ENST00000558745 KITLGP21583 273 aa11.76□□□□□ -0.53
TSPAN3-205ENST00000558745 NR4A2P43354 598 aa11.76□□□□□ -0.53
TSPAN3-205ENST00000558745 SLC6A9P48067 706 aa11.76□□□□□ -0.53
TSPAN3-205ENST00000558745 GK2Q14410 553 aaPredicted RBP11.76□□□□□ -0.53
TSPAN3-205ENST00000558745 MOGQ16653 247 aa11.76□□□□□ -0.53
TSPAN3-205ENST00000558745 AADACL4Q5VUY2 407 aa11.76□□□□□ -0.53
TSPAN3-205ENST00000558745 C1orf174Q8IYL3 243 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 248.3 ms