RNA–Protein interactions for RNA: ENST00000556082.5

ATXN3-235, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 660 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-235ENST00000556082 MDS2Q8NDY4 140 aa7.32□□□□□ -1.24
ATXN3-235ENST00000556082 OR51A4Q8NGJ6 313 aa7.32□□□□□ -1.24
ATXN3-235ENST00000556082 OR6N1Q8NGY5 312 aa7.32□□□□□ -1.24
ATXN3-235ENST00000556082 OR10AC1Q8NH08 325 aa7.32□□□□□ -1.24
ATXN3-235ENST00000556082 TRIM63Q969Q1 353 aa7.32□□□□□ -1.24
ATXN3-235ENST00000556082 CPNE4Q96A23 557 aaPredicted RBP7.32□□□□□ -1.24
ATXN3-235ENST00000556082 RFT1Q96AA3 541 aa7.32□□□□□ -1.24
ATXN3-235ENST00000556082 TMEM45BQ96B21 275 aa7.32□□□□□ -1.24
ATXN3-235ENST00000556082 S100A16Q96FQ6 103 aaKnown RBP7.32□□□□□ -1.24
ATXN3-235ENST00000556082 ZNF385AQ96PM9 386 aaKnown RBP7.32□□□□□ -1.24
ATXN3-235ENST00000556082 SRXN1Q9BYN0 137 aa7.32□□□□□ -1.24
ATXN3-235ENST00000556082 C11orf54Q9H0W9 315 aaPredicted RBP7.32□□□□□ -1.24
ATXN3-235ENST00000556082 NELFAQ9H3P2 528 aa7.32□□□□□ -1.24
ATXN3-235ENST00000556082 ZNF703Q9H7S9 590 aaPredicted RBP7.32□□□□□ -1.24
ATXN3-235ENST00000556082 SEC61A2Q9H9S3 476 aa7.32□□□□□ -1.24
ATXN3-235ENST00000556082 ACKR4Q9NPB9 350 aa7.32□□□□□ -1.24
ATXN3-235ENST00000556082 PNRC2Q9NPJ4 139 aaKnown RBP7.32□□□□□ -1.24
ATXN3-235ENST00000556082 ASCL3Q9NQ33 180 aa7.32□□□□□ -1.24
ATXN3-235ENST00000556082 ZNF275Q9NSD4 429 aaPredicted RBP7.32□□□□□ -1.24
ATXN3-235ENST00000556082 DDX28Q9NUL7 540 aaKnown RBP7.32□□□□□ -1.24
ATXN3-235ENST00000556082 RBFOX1Q9NWB1 397 aaKnown RBP7.32□□□□□ -1.24
ATXN3-235ENST00000556082 CKLFQ9UBR5 152 aa7.32□□□□□ -1.24
ATXN3-235ENST00000556082 NUFIP1Q9UHK0 495 aaKnown RBP7.32□□□□□ -1.24
ATXN3-235ENST00000556082 KLF13Q9Y2Y9 288 aaPredicted RBP7.32□□□□□ -1.24
ATXN3-235ENST00000556082 FLVCR1Q9Y5Y0 555 aa7.32□□□□□ -1.24
ATXN3-235ENST00000556082 ZNF318Q5VUA4 2279 aa7.31□□□□□ -1.24
ATXN3-235ENST00000556082 KNTC1P50748 2209 aa7.31□□□□□ -1.24
ATXN3-235ENST00000556082 IGKV3D-15A0A087WSY6 115 aa7.31□□□□□ -1.24
ATXN3-235ENST00000556082 SPAARA0A1B0GVQ0 90 aa7.31□□□□□ -1.24
ATXN3-235ENST00000556082 LOC390937A0A1W2PQ73 354 aa7.31□□□□□ -1.24
ATXN3-235ENST00000556082 OR5H15A6NDH6 313 aa7.31□□□□□ -1.24
ATXN3-235ENST00000556082 ANXA2P2A6NMY6 339 aa7.31□□□□□ -1.24
ATXN3-235ENST00000556082 KLRC4-KLRK1H3BQV0 150 aa7.31□□□□□ -1.24
ATXN3-235ENST00000556082 SLC17A2O00624 439 aa7.31□□□□□ -1.24
ATXN3-235ENST00000556082 NME2P1O60361 137 aa7.31□□□□□ -1.24
ATXN3-235ENST00000556082 APOC1P02654 83 aa7.31□□□□□ -1.24
ATXN3-235ENST00000556082 ANXA2P07355 339 aaKnown RBP7.31□□□□□ -1.24
ATXN3-235ENST00000556082 HNRNPCP07910 306 aaKnown RBP eCLIP7.31□□□□□ -1.24
ATXN3-235ENST00000556082 SP1P08047 785 aa7.31□□□□□ -1.24
ATXN3-235ENST00000556082 TRAPPC2P0DI81 140 aa7.31□□□□□ -1.24
ATXN3-235ENST00000556082 TRAPPC2BP0DI82 140 aa7.31□□□□□ -1.24
ATXN3-235ENST00000556082 POU3F2P20265 443 aaPredicted RBP7.31□□□□□ -1.24
ATXN3-235ENST00000556082 CCL1P22362 96 aa7.31□□□□□ -1.24
ATXN3-235ENST00000556082 GDF1P27539 372 aa7.31□□□□□ -1.24
ATXN3-235ENST00000556082 ZNF84P51523 738 aa7.31□□□□□ -1.24
ATXN3-235ENST00000556082 ART1P52961 327 aa7.31□□□□□ -1.24
ATXN3-235ENST00000556082 MRPS10P82664 201 aaKnown RBP7.31□□□□□ -1.24
ATXN3-235ENST00000556082 NRN1LQ496H8 165 aa7.31□□□□□ -1.24
ATXN3-235ENST00000556082 WIPI1Q5MNZ9 446 aaPredicted RBP7.31□□□□□ -1.24
ATXN3-235ENST00000556082 C1orf100Q5SVJ3 147 aa7.31□□□□□ -1.24
ATXN3-235ENST00000556082 OTPQ5XKR4 325 aa7.31□□□□□ -1.24
ATXN3-235ENST00000556082 CARD17Q5XLA6 110 aa7.31□□□□□ -1.24
ATXN3-235ENST00000556082 GLT8D1Q68CQ7 371 aa7.31□□□□□ -1.24
ATXN3-235ENST00000556082 ASPHD2Q6ICH7 369 aa7.31□□□□□ -1.24
ATXN3-235ENST00000556082 ZNF529Q6P280 563 aa7.31□□□□□ -1.24
ATXN3-235ENST00000556082 CORO6Q6QEF8 472 aa7.31□□□□□ -1.24
ATXN3-235ENST00000556082 CFAP77Q6ZQR2 320 aa7.31□□□□□ -1.24
ATXN3-235ENST00000556082 DNM1P46Q6ZS02 220 aa7.31□□□□□ -1.24
ATXN3-235ENST00000556082 SPATC1Q76KD6 591 aa7.31□□□□□ -1.24
ATXN3-235ENST00000556082 FCRLAQ7L513 359 aa7.31□□□□□ -1.24
ATXN3-235ENST00000556082 LYPD6Q86Y78 171 aa7.31□□□□□ -1.24
ATXN3-235ENST00000556082 CDH26Q8IXH8 852 aa7.31□□□□□ -1.24
ATXN3-235ENST00000556082 UBQLNLQ8IYU4 475 aa7.31□□□□□ -1.24
ATXN3-235ENST00000556082 CMTM4Q8IZR5 234 aa7.31□□□□□ -1.24
ATXN3-235ENST00000556082 GALNT16Q8N428 558 aa7.31□□□□□ -1.24
ATXN3-235ENST00000556082 NKAIN3Q8N8D7 197 aa7.31□□□□□ -1.24
ATXN3-235ENST00000556082 CCDC54Q8NEL0 328 aa7.31□□□□□ -1.24
ATXN3-235ENST00000556082 PRSS33Q8NF86 280 aa7.31□□□□□ -1.24
ATXN3-235ENST00000556082 GJC3Q8NFK1 279 aa7.31□□□□□ -1.24
ATXN3-235ENST00000556082 OR10D3Q8NH80 312 aa7.31□□□□□ -1.24
ATXN3-235ENST00000556082 LGALS14Q8TCE9 139 aa7.31□□□□□ -1.24
ATXN3-235ENST00000556082 CPT1CQ8TCG5 803 aa7.31□□□□□ -1.24
ATXN3-235ENST00000556082 SNRNP27Q8WVK2 155 aaKnown RBP7.31□□□□□ -1.24
ATXN3-235ENST00000556082 TSEN15Q8WW01 171 aaKnown RBP7.31□□□□□ -1.24
ATXN3-235ENST00000556082 HAS2Q92819 552 aa7.31□□□□□ -1.24
ATXN3-235ENST00000556082 PPP1R14AQ96A00 147 aa7.31□□□□□ -1.24
ATXN3-235ENST00000556082 PTX4Q96A99 478 aa7.31□□□□□ -1.24
ATXN3-235ENST00000556082 FOXRED1Q96CU9 486 aaPredicted RBP7.31□□□□□ -1.24
ATXN3-235ENST00000556082 ORAI1Q96D31 301 aa7.31□□□□□ -1.24
ATXN3-235ENST00000556082 HAVCR1Q96D42 359 aa7.31□□□□□ -1.24
ATXN3-235ENST00000556082 AGAP4Q96P64 663 aa7.31□□□□□ -1.24
ATXN3-235ENST00000556082 SIGLEC12Q96PQ1 595 aa7.31□□□□□ -1.24
ATXN3-235ENST00000556082 C7orf50Q9BRJ6 194 aaKnown RBP7.31□□□□□ -1.24
ATXN3-235ENST00000556082 PBOV1Q9GZY1 135 aa7.31□□□□□ -1.24
ATXN3-235ENST00000556082 SLC25A18Q9H1K4 315 aa7.31□□□□□ -1.24
ATXN3-235ENST00000556082 C12orf49Q9H741 205 aa7.31□□□□□ -1.24
ATXN3-235ENST00000556082 RNF122Q9H9V4 155 aa7.31□□□□□ -1.24
ATXN3-235ENST00000556082 PLEKHA1Q9HB21 404 aa7.31□□□□□ -1.24
ATXN3-235ENST00000556082 EMC7Q9NPA0 242 aa7.31□□□□□ -1.24
ATXN3-235ENST00000556082 CENPMQ9NSP4 180 aa7.31□□□□□ -1.24
ATXN3-235ENST00000556082 RHBDL2Q9NX52 303 aa7.31□□□□□ -1.24
ATXN3-235ENST00000556082 PAQR5Q9NXK6 330 aaPredicted RBP7.31□□□□□ -1.24
ATXN3-235ENST00000556082 MALT1Q9UDY8 824 aa7.31□□□□□ -1.24
ATXN3-235ENST00000556082 OR5V1Q9UGF6 321 aa7.31□□□□□ -1.24
ATXN3-235ENST00000556082 STEAP1Q9UHE8 339 aa7.31□□□□□ -1.24
ATXN3-235ENST00000556082 FBXL3Q9UKT7 428 aa7.31□□□□□ -1.24
ATXN3-235ENST00000556082 OTOGLQ3ZCN5 2332 aa7.3□□□□□ -1.24
ATXN3-235ENST00000556082 A0A0B4J203 849 aa7.3□□□□□ -1.24
ATXN3-235ENST00000556082 A0A1B0GTI1 187 aa7.3□□□□□ -1.24
ATXN3-235ENST00000556082 LOC107986453A0A1B0GWG9 222 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms