RNA–Protein interactions for RNA: ENST00000555301.1

CHD8-208, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 2

Gene CHD8, Length 918 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-208ENST00000555301 LRP12Q9Y561 859 aa12.33□□□□□ -0.44
CHD8-208ENST00000555301 ICE1Q9Y2F5 2266 aa12.33□□□□□ -0.44
CHD8-208ENST00000555301 DOPEY2Q9Y3R5 2298 aa12.32□□□□□ -0.44
CHD8-208ENST00000555301 A0A1W2PPR1 153 aa12.32□□□□□ -0.44
CHD8-208ENST00000555301 E7EQL1 145 aa12.32□□□□□ -0.44
CHD8-208ENST00000555301 SLC1A7O00341 560 aa12.32□□□□□ -0.44
CHD8-208ENST00000555301 HS3ST1O14792 307 aa12.32□□□□□ -0.44
CHD8-208ENST00000555301 SULT1C4O75897 302 aa12.32□□□□□ -0.44
CHD8-208ENST00000555301 LCKP06239 509 aa12.32□□□□□ -0.44
CHD8-208ENST00000555301 FAM157BP0CG42 384 aa12.32□□□□□ -0.44
CHD8-208ENST00000555301 SLC6A9P48067 706 aa12.32□□□□□ -0.44
CHD8-208ENST00000555301 CX3CR1P49238 355 aa12.32□□□□□ -0.44
CHD8-208ENST00000555301 ACTA2P62736 377 aa12.32□□□□□ -0.44
CHD8-208ENST00000555301 ACTG2P63267 376 aa12.32□□□□□ -0.44
CHD8-208ENST00000555301 ZNF85Q03923 595 aa12.32□□□□□ -0.44
CHD8-208ENST00000555301 PLEKHG7Q6ZR37 379 aa12.32□□□□□ -0.44
CHD8-208ENST00000555301 COLCA1Q6ZS62 124 aa12.32□□□□□ -0.44
CHD8-208ENST00000555301 KCTD20Q7Z5Y7 419 aa12.32□□□□□ -0.44
CHD8-208ENST00000555301 EGFL6Q8IUX8 553 aa12.32□□□□□ -0.44
CHD8-208ENST00000555301 ZNF101Q8IZC7 436 aa12.32□□□□□ -0.44
CHD8-208ENST00000555301 RFLNBQ8N5W9 214 aa12.32□□□□□ -0.44
CHD8-208ENST00000555301 ZNF540Q8NDQ6 660 aa12.32□□□□□ -0.44
CHD8-208ENST00000555301 OR5L1Q8NGL2 311 aa12.32□□□□□ -0.44
CHD8-208ENST00000555301 OR1J1Q8NGS3 322 aa12.32□□□□□ -0.44
CHD8-208ENST00000555301 ABHD4Q8TB40 342 aa12.32□□□□□ -0.44
CHD8-208ENST00000555301 NEUROG1Q92886 237 aa12.32□□□□□ -0.44
CHD8-208ENST00000555301 TMEM80Q96HE8 168 aa12.32□□□□□ -0.44
CHD8-208ENST00000555301 DOK1Q99704 481 aa12.32□□□□□ -0.44
CHD8-208ENST00000555301 DHRS9Q9BPW9 319 aa12.32□□□□□ -0.44
CHD8-208ENST00000555301 C1QTNF5Q9BXJ0 243 aa12.32□□□□□ -0.44
CHD8-208ENST00000555301 TTTY10Q9BZA0 68 aa12.32□□□□□ -0.44
CHD8-208ENST00000555301 PLEKHF2Q9H8W4 249 aa12.32□□□□□ -0.44
CHD8-208ENST00000555301 FAIMQ9NVQ4 179 aa12.32□□□□□ -0.44
CHD8-208ENST00000555301 CHCHD3Q9NX63 227 aaKnown RBP12.32□□□□□ -0.44
CHD8-208ENST00000555301 DIMT1Q9UNQ2 313 aaKnown RBP12.32□□□□□ -0.44
CHD8-208ENST00000555301 TPRKBQ9Y3C4 175 aa12.32□□□□□ -0.44
CHD8-208ENST00000555301 METTL15A6NJ78 407 aa12.31□□□□□ -0.44
CHD8-208ENST00000555301 PSMD9O00233 223 aa12.31□□□□□ -0.44
CHD8-208ENST00000555301 NGFP01138 241 aa12.31□□□□□ -0.44
CHD8-208ENST00000555301 LCATP04180 440 aa12.31□□□□□ -0.44
CHD8-208ENST00000555301 TACSTD2P09758 323 aa12.31□□□□□ -0.44
CHD8-208ENST00000555301 MYL12AP19105 171 aa12.31□□□□□ -0.44
CHD8-208ENST00000555301 APOBEC3AP31941 199 aaPredicted RBP12.31□□□□□ -0.44
CHD8-208ENST00000555301 THBS4P35443 961 aa12.31□□□□□ -0.44
CHD8-208ENST00000555301 FABP6P51161 128 aa12.31□□□□□ -0.44
CHD8-208ENST00000555301 PSMA6P60900 246 aaKnown RBP12.31□□□□□ -0.44
CHD8-208ENST00000555301 ST3GAL4Q11206 333 aa12.31□□□□□ -0.44
CHD8-208ENST00000555301 GALEQ14376 348 aa12.31□□□□□ -0.44
CHD8-208ENST00000555301 ZNF829Q3KNS6 432 aaPredicted RBP12.31□□□□□ -0.44
CHD8-208ENST00000555301 RBM48Q5RL73 367 aaKnown RBP12.31□□□□□ -0.44
CHD8-208ENST00000555301 ZNF684Q5T5D7 378 aa12.31□□□□□ -0.44
CHD8-208ENST00000555301 RGS7BPQ6MZT1 257 aaPredicted RBP12.31□□□□□ -0.44
CHD8-208ENST00000555301 VHLLQ6RSH7 139 aa12.31□□□□□ -0.44
CHD8-208ENST00000555301 C20orf204Q6ZNR8 217 aa12.31□□□□□ -0.44
CHD8-208ENST00000555301 RFPL4BQ6ZWI9 263 aa12.31□□□□□ -0.44
CHD8-208ENST00000555301 SSX6Q7RTT6 188 aa12.31□□□□□ -0.44
CHD8-208ENST00000555301 FAM220AQ7Z4H9 259 aa12.31□□□□□ -0.44
CHD8-208ENST00000555301 STX19Q8N4C7 294 aa12.31□□□□□ -0.44
CHD8-208ENST00000555301 ZNF611Q8N823 705 aa12.31□□□□□ -0.44
CHD8-208ENST00000555301 TMEM171Q8WVE6 324 aa12.31□□□□□ -0.44
CHD8-208ENST00000555301 OR51B6Q9H340 312 aa12.31□□□□□ -0.44
CHD8-208ENST00000555301 UBTD1Q9HAC8 227 aa12.31□□□□□ -0.44
CHD8-208ENST00000555301 ERVK13-1Q9NX77 482 aa12.31□□□□□ -0.44
CHD8-208ENST00000555301 MRM2Q9UI43 246 aaKnown RBP12.31□□□□□ -0.44
CHD8-208ENST00000555301 BLOC1S6Q9UL45 172 aa12.31□□□□□ -0.44
CHD8-208ENST00000555301 EXOSC1Q9Y3B2 195 aaKnown RBP12.31□□□□□ -0.44
CHD8-208ENST00000555301 CMAHPQ9Y471 501 aa12.31□□□□□ -0.44
CHD8-208ENST00000555301 ACOD1A6NK06 481 aa12.3□□□□□ -0.44
CHD8-208ENST00000555301 PRR32B1ATL7 298 aa12.3□□□□□ -0.44
CHD8-208ENST00000555301 H3BSA7 217 aa12.3□□□□□ -0.44
CHD8-208ENST00000555301 GPRIN2O60269 458 aa12.3□□□□□ -0.44
CHD8-208ENST00000555301 ANXA2P07355 339 aaKnown RBP12.3□□□□□ -0.44
CHD8-208ENST00000555301 PRF1P14222 555 aa12.3□□□□□ -0.44
CHD8-208ENST00000555301 MMP16P51512 607 aa12.3□□□□□ -0.44
CHD8-208ENST00000555301 ZNF121P58317 390 aaPredicted RBP12.3□□□□□ -0.44
CHD8-208ENST00000555301 SELENOVP59797 346 aa12.3□□□□□ -0.44
CHD8-208ENST00000555301 PPP1CBP62140 327 aa12.3□□□□□ -0.44
CHD8-208ENST00000555301 MALLQ13021 153 aa12.3□□□□□ -0.44
CHD8-208ENST00000555301 ZNF718Q3SXZ3 478 aa12.3□□□□□ -0.44
CHD8-208ENST00000555301 CDONQ4KMG0 1287 aa12.3□□□□□ -0.44
CHD8-208ENST00000555301 AHSA2Q719I0 299 aa12.3□□□□□ -0.44
CHD8-208ENST00000555301 LHFPL3Q86UP9 236 aa12.3□□□□□ -0.44
CHD8-208ENST00000555301 FBXL14Q8N1E6 418 aa12.3□□□□□ -0.44
CHD8-208ENST00000555301 SYS1Q8N2H4 156 aa12.3□□□□□ -0.44
CHD8-208ENST00000555301 ZNF786Q8N393 782 aa12.3□□□□□ -0.44
CHD8-208ENST00000555301 YIPF7Q8N8F6 280 aa12.3□□□□□ -0.44
CHD8-208ENST00000555301 OR52H1Q8NGJ2 320 aa12.3□□□□□ -0.44
CHD8-208ENST00000555301 MYDGFQ969H8 173 aa12.3□□□□□ -0.44
CHD8-208ENST00000555301 RHNO1Q9BSD3 238 aa12.3□□□□□ -0.44
CHD8-208ENST00000555301 ALG8Q9BVK2 526 aa12.3□□□□□ -0.44
CHD8-208ENST00000555301 FKBP14Q9NWM8 211 aa12.3□□□□□ -0.44
CHD8-208ENST00000555301 UBAP1Q9NZ09 502 aa12.3□□□□□ -0.44
CHD8-208ENST00000555301 LRRC42Q9Y546 428 aa12.3□□□□□ -0.44
CHD8-208ENST00000555301 TMEM269A0A1B0GVZ9 245 aa12.29□□□□□ -0.44
CHD8-208ENST00000555301 PTGES3LE9PB15 166 aa12.29□□□□□ -0.44
CHD8-208ENST00000555301 MAGEB4O15481 346 aaPredicted RBP12.29□□□□□ -0.44
CHD8-208ENST00000555301 OR4A8P0C604 315 aa12.29□□□□□ -0.44
CHD8-208ENST00000555301 CRHBPP24387 322 aa12.29□□□□□ -0.44
CHD8-208ENST00000555301 GCH1P30793 250 aa12.29□□□□□ -0.44
CHD8-208ENST00000555301 TTKP33981 857 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms