RNA–Protein interactions for RNA: ENST00000554600.5

SHMT2-213, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 837 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-213ENST00000554600 FAM183AA6NL82 134 aa9.07□□□□□ -0.96
SHMT2-213ENST00000554600 CLDN25C9JDP6 229 aa9.07□□□□□ -0.96
SHMT2-213ENST00000554600 DEAF1O75398 565 aaPredicted RBP9.07□□□□□ -0.96
SHMT2-213ENST00000554600 CIB2O75838 187 aa9.07□□□□□ -0.96
SHMT2-213ENST00000554600 TACSTD2P09758 323 aa9.07□□□□□ -0.96
SHMT2-213ENST00000554600 CLUP10909 449 aa9.07□□□□□ -0.96
SHMT2-213ENST00000554600 ANXA8P13928 327 aa9.07□□□□□ -0.96
SHMT2-213ENST00000554600 SPI1P17947 270 aa9.07□□□□□ -0.96
SHMT2-213ENST00000554600 PAICSP22234 425 aaKnown RBP9.07□□□□□ -0.96
SHMT2-213ENST00000554600 PRKACGP22612 351 aa9.07□□□□□ -0.96
SHMT2-213ENST00000554600 GRK5P34947 590 aa9.07□□□□□ -0.96
SHMT2-213ENST00000554600 GGT2P36268 569 aa9.07□□□□□ -0.96
SHMT2-213ENST00000554600 CRYBB2P43320 205 aa9.07□□□□□ -0.96
SHMT2-213ENST00000554600 TPTEP56180 551 aa9.07□□□□□ -0.96
SHMT2-213ENST00000554600 GINS1Q14691 196 aa9.07□□□□□ -0.96
SHMT2-213ENST00000554600 C1orf146Q5VVC0 180 aa9.07□□□□□ -0.96
SHMT2-213ENST00000554600 OR2T2Q6IF00 324 aa9.07□□□□□ -0.96
SHMT2-213ENST00000554600 SLC27A4Q6P1M0 643 aa9.07□□□□□ -0.96
SHMT2-213ENST00000554600 CD300LDQ6UXZ3 194 aa9.07□□□□□ -0.96
SHMT2-213ENST00000554600 ZNF771Q7L3S4 317 aaPredicted RBP9.07□□□□□ -0.96
SHMT2-213ENST00000554600 HIPK1Q86Z02 1210 aa9.07□□□□□ -0.96
SHMT2-213ENST00000554600 ZNF511Q8NB15 262 aa9.07□□□□□ -0.96
SHMT2-213ENST00000554600 OR2Z1Q8NG97 314 aa9.07□□□□□ -0.96
SHMT2-213ENST00000554600 ZNRF4Q8WWF5 429 aa9.07□□□□□ -0.96
SHMT2-213ENST00000554600 CCL17Q92583 94 aa9.07□□□□□ -0.96
SHMT2-213ENST00000554600 PLEKHA8Q96JA3 519 aa9.07□□□□□ -0.96
SHMT2-213ENST00000554600 DIRC2Q96SL1 478 aa9.07□□□□□ -0.96
SHMT2-213ENST00000554600 SOX7Q9BT81 388 aa9.07□□□□□ -0.96
SHMT2-213ENST00000554600 RBM4Q9BWF3 364 aaKnown RBP9.07□□□□□ -0.96
SHMT2-213ENST00000554600 SHARPINQ9H0F6 387 aa9.07□□□□□ -0.96
SHMT2-213ENST00000554600 WDR76Q9H967 626 aa9.07□□□□□ -0.96
SHMT2-213ENST00000554600 CENPMQ9NSP4 180 aa9.07□□□□□ -0.96
SHMT2-213ENST00000554600 ZDHHC8Q9ULC8 765 aa9.07□□□□□ -0.96
SHMT2-213ENST00000554600 N6AMT1Q9Y5N5 214 aa9.07□□□□□ -0.96
SHMT2-213ENST00000554600 CACNG2Q9Y698 323 aa9.07□□□□□ -0.96
SHMT2-213ENST00000554600 COMMD3-BMI1R4GMX3 469 aa9.07□□□□□ -0.96
SHMT2-213ENST00000554600 ISPDA4D126 451 aa9.06□□□□□ -0.96
SHMT2-213ENST00000554600 J3QW42 95 aa9.06□□□□□ -0.96
SHMT2-213ENST00000554600 M0R135 149 aa9.06□□□□□ -0.96
SHMT2-213ENST00000554600 ZNF593O00488 134 aaPredicted RBP9.06□□□□□ -0.96
SHMT2-213ENST00000554600 RP2O75695 350 aa9.06□□□□□ -0.96
SHMT2-213ENST00000554600 ACSM4P0C7M7 580 aa9.06□□□□□ -0.96
SHMT2-213ENST00000554600 OSMP13725 252 aa9.06□□□□□ -0.96
SHMT2-213ENST00000554600 RAC2P15153 192 aa9.06□□□□□ -0.96
SHMT2-213ENST00000554600 HNF1AP20823 631 aa9.06□□□□□ -0.96
SHMT2-213ENST00000554600 KITLGP21583 273 aa9.06□□□□□ -0.96
SHMT2-213ENST00000554600 ENTPD1P49961 510 aa9.06□□□□□ -0.96
SHMT2-213ENST00000554600 SLC25A1P53007 311 aa9.06□□□□□ -0.96
SHMT2-213ENST00000554600 PRSS12P56730 875 aa9.06□□□□□ -0.96
SHMT2-213ENST00000554600 MALLQ13021 153 aa9.06□□□□□ -0.96
SHMT2-213ENST00000554600 ZNF362Q5T0B9 420 aaPredicted RBP9.06□□□□□ -0.96
SHMT2-213ENST00000554600 IL17RELQ6ZVW7 336 aa9.06□□□□□ -0.96
SHMT2-213ENST00000554600 SPATC1Q76KD6 591 aa9.06□□□□□ -0.96
SHMT2-213ENST00000554600 DCXRQ7Z4W1 244 aa9.06□□□□□ -0.96
SHMT2-213ENST00000554600 ERI1Q8IV48 349 aaKnown RBP9.06□□□□□ -0.96
SHMT2-213ENST00000554600 LINC01356Q8N9X3 169 aa9.06□□□□□ -0.96
SHMT2-213ENST00000554600 BHLHE23Q8NDY6 225 aa9.06□□□□□ -0.96
SHMT2-213ENST00000554600 OR6N2Q8NGY6 317 aa9.06□□□□□ -0.96
SHMT2-213ENST00000554600 CLDND2Q8NHS1 167 aa9.06□□□□□ -0.96
SHMT2-213ENST00000554600 HPS1Q92902 700 aa9.06□□□□□ -0.96
SHMT2-213ENST00000554600 RAB1CQ92928 201 aa9.06□□□□□ -0.96
SHMT2-213ENST00000554600 SPTSSAQ969W0 71 aa9.06□□□□□ -0.96
SHMT2-213ENST00000554600 SLCO4A1Q96BD0 722 aa9.06□□□□□ -0.96
SHMT2-213ENST00000554600 HAVCR1Q96D42 359 aa9.06□□□□□ -0.96
SHMT2-213ENST00000554600 ZNF799Q96GE5 643 aa9.06□□□□□ -0.96
SHMT2-213ENST00000554600 MAP6Q96JE9 813 aa9.06□□□□□ -0.96
SHMT2-213ENST00000554600 DDOQ99489 341 aa9.06□□□□□ -0.96
SHMT2-213ENST00000554600 COPS4Q9BT78 406 aa9.06□□□□□ -0.96
SHMT2-213ENST00000554600 HCAR1Q9BXC0 346 aa9.06□□□□□ -0.96
SHMT2-213ENST00000554600 TEX12Q9BXU0 123 aa9.06□□□□□ -0.96
SHMT2-213ENST00000554600 OR51V1Q9H2C8 321 aa9.06□□□□□ -0.96
SHMT2-213ENST00000554600 MMADHCQ9H3L0 296 aaPredicted RBP9.06□□□□□ -0.96
SHMT2-213ENST00000554600 LPAR2Q9HBW0 351 aa9.06□□□□□ -0.96
SHMT2-213ENST00000554600 CMC2Q9NRP2 79 aa9.06□□□□□ -0.96
SHMT2-213ENST00000554600 CDC42EP3Q9UKI2 254 aa9.06□□□□□ -0.96
SHMT2-213ENST00000554600 COL6A5A8TX70 2615 aa9.05□□□□□ -0.96
SHMT2-213ENST00000554600 PRR23D1E9PI22 279 aaPredicted RBP9.05□□□□□ -0.96
SHMT2-213ENST00000554600 WNT9BO14905 357 aa9.05□□□□□ -0.96
SHMT2-213ENST00000554600 SURF4O15260 269 aa9.05□□□□□ -0.96
SHMT2-213ENST00000554600 HMGN1P05114 100 aa9.05□□□□□ -0.96
SHMT2-213ENST00000554600 ADH4P08319 380 aa9.05□□□□□ -0.96
SHMT2-213ENST00000554600 PRR23D2P0DMB1 279 aaPredicted RBP9.05□□□□□ -0.96
SHMT2-213ENST00000554600 TNFRSF1AP19438 455 aa9.05□□□□□ -0.96
SHMT2-213ENST00000554600 IGFBP5P24593 272 aa9.05□□□□□ -0.96
SHMT2-213ENST00000554600 PRKXP51817 358 aa9.05□□□□□ -0.96
SHMT2-213ENST00000554600 BLVRAP53004 296 aa9.05□□□□□ -0.96
SHMT2-213ENST00000554600 CDH15P55291 814 aa9.05□□□□□ -0.96
SHMT2-213ENST00000554600 RPS7P62081 194 aaKnown RBP9.05□□□□□ -0.96
SHMT2-213ENST00000554600 SLC3A1Q07837 685 aa9.05□□□□□ -0.96
SHMT2-213ENST00000554600 CDK5R2Q13319 367 aa9.05□□□□□ -0.96
SHMT2-213ENST00000554600 EIF2B1Q14232 305 aaKnown RBP9.05□□□□□ -0.96
SHMT2-213ENST00000554600 KLHL12Q53G59 568 aa9.05□□□□□ -0.96
SHMT2-213ENST00000554600 SPRNQ5BIV9 151 aa9.05□□□□□ -0.96
SHMT2-213ENST00000554600 ACSM5Q6NUN0 579 aa9.05□□□□□ -0.96
SHMT2-213ENST00000554600 PLBD1Q6P4A8 553 aa9.05□□□□□ -0.96
SHMT2-213ENST00000554600 SHQ1Q6PI26 577 aaKnown RBP9.05□□□□□ -0.96
SHMT2-213ENST00000554600 FBXW12Q6X9E4 464 aa9.05□□□□□ -0.96
SHMT2-213ENST00000554600 CCDC121Q6ZUS5 278 aa9.05□□□□□ -0.96
SHMT2-213ENST00000554600 MRPL21Q7Z2W9 205 aaKnown RBP9.05□□□□□ -0.96
SHMT2-213ENST00000554600 PEG10Q86TG7 708 aaKnown RBP9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms