RNA–Protein interactions for RNA: ENST00000553949.1

SHMT2-209, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-209ENST00000553949 SULT1C4O75897 302 aa10.56□□□□□ -0.72
SHMT2-209ENST00000553949 NGFP01138 241 aa10.56□□□□□ -0.72
SHMT2-209ENST00000553949 KRT8P05787 483 aa10.56□□□□□ -0.72
SHMT2-209ENST00000553949 MYL12AP19105 171 aa10.56□□□□□ -0.72
SHMT2-209ENST00000553949 CRHBPP24387 322 aa10.56□□□□□ -0.72
SHMT2-209ENST00000553949 SSTR2P30874 369 aa10.56□□□□□ -0.72
SHMT2-209ENST00000553949 RAD52P43351 418 aa10.56□□□□□ -0.72
SHMT2-209ENST00000553949 SLC6A9P48067 706 aa10.56□□□□□ -0.72
SHMT2-209ENST00000553949 PRKXP51817 358 aa10.56□□□□□ -0.72
SHMT2-209ENST00000553949 RIDAP52758 137 aaKnown RBP10.56□□□□□ -0.72
SHMT2-209ENST00000553949 NKX6-1P78426 367 aaPredicted RBP10.56□□□□□ -0.72
SHMT2-209ENST00000553949 MVKQ03426 396 aa10.56□□□□□ -0.72
SHMT2-209ENST00000553949 ZNF672Q499Z4 452 aaPredicted RBP10.56□□□□□ -0.72
SHMT2-209ENST00000553949 RBM48Q5RL73 367 aaKnown RBP10.56□□□□□ -0.72
SHMT2-209ENST00000553949 DRAM2Q6UX65 266 aa10.56□□□□□ -0.72
SHMT2-209ENST00000553949 RFPL4BQ6ZWI9 263 aa10.56□□□□□ -0.72
SHMT2-209ENST00000553949 LHFPL3Q86UP9 236 aa10.56□□□□□ -0.72
SHMT2-209ENST00000553949 NAA40Q86UY6 237 aa10.56□□□□□ -0.72
SHMT2-209ENST00000553949 TMEM200AQ86VY9 491 aa10.56□□□□□ -0.72
SHMT2-209ENST00000553949 ZNF101Q8IZC7 436 aa10.56□□□□□ -0.72
SHMT2-209ENST00000553949 STX19Q8N4C7 294 aa10.56□□□□□ -0.72
SHMT2-209ENST00000553949 ZNF283Q8N7M2 679 aa10.56□□□□□ -0.72
SHMT2-209ENST00000553949 ABHD4Q8TB40 342 aa10.56□□□□□ -0.72
SHMT2-209ENST00000553949 AKAP1Q92667 903 aaKnown RBP eCLIP10.56□□□□□ -0.72
SHMT2-209ENST00000553949 DOK1Q99704 481 aa10.56□□□□□ -0.72
SHMT2-209ENST00000553949 ZNF649Q9BS31 505 aa10.56□□□□□ -0.72
SHMT2-209ENST00000553949 ALG8Q9BVK2 526 aa10.56□□□□□ -0.72
SHMT2-209ENST00000553949 NIPAL2Q9H841 368 aa10.56□□□□□ -0.72
SHMT2-209ENST00000553949 TBCCD1Q9NVR7 557 aa10.56□□□□□ -0.72
SHMT2-209ENST00000553949 PAK1IP1Q9NWT1 392 aaPredicted RBP10.56□□□□□ -0.72
SHMT2-209ENST00000553949 TPRKBQ9Y3C4 175 aa10.56□□□□□ -0.72
SHMT2-209ENST00000553949 METTL15A6NJ78 407 aa10.55□□□□□ -0.72
SHMT2-209ENST00000553949 E7EQL1 145 aa10.55□□□□□ -0.72
SHMT2-209ENST00000553949 GPRIN2O60269 458 aa10.55□□□□□ -0.72
SHMT2-209ENST00000553949 APOC1P02654 83 aa10.55□□□□□ -0.72
SHMT2-209ENST00000553949 LCATP04180 440 aa10.55□□□□□ -0.72
SHMT2-209ENST00000553949 LCKP06239 509 aa10.55□□□□□ -0.72
SHMT2-209ENST00000553949 CDK1P06493 297 aa10.55□□□□□ -0.72
SHMT2-209ENST00000553949 LIMS3P0CW19 117 aa10.55□□□□□ -0.72
SHMT2-209ENST00000553949 LIMS4P0CW20 117 aa10.55□□□□□ -0.72
SHMT2-209ENST00000553949 SLC2A1P11166 492 aa10.55□□□□□ -0.72
SHMT2-209ENST00000553949 C21orf33P30042 268 aaPredicted RBP10.55□□□□□ -0.72
SHMT2-209ENST00000553949 DCTDP32321 178 aa10.55□□□□□ -0.72
SHMT2-209ENST00000553949 THBS4P35443 961 aa10.55□□□□□ -0.72
SHMT2-209ENST00000553949 GLRXP35754 106 aa10.55□□□□□ -0.72
SHMT2-209ENST00000553949 RGS6P49758 472 aa10.55□□□□□ -0.72
SHMT2-209ENST00000553949 ETV1P50549 477 aa10.55□□□□□ -0.72
SHMT2-209ENST00000553949 ZNF121P58317 390 aaPredicted RBP10.55□□□□□ -0.72
SHMT2-209ENST00000553949 PSMA6P60900 246 aaKnown RBP10.55□□□□□ -0.72
SHMT2-209ENST00000553949 ACTA2P62736 377 aa10.55□□□□□ -0.72
SHMT2-209ENST00000553949 ACTG2P63267 376 aa10.55□□□□□ -0.72
SHMT2-209ENST00000553949 SLC35A2P78381 396 aa10.55□□□□□ -0.72
SHMT2-209ENST00000553949 GALEQ14376 348 aa10.55□□□□□ -0.72
SHMT2-209ENST00000553949 CDONQ4KMG0 1287 aa10.55□□□□□ -0.72
SHMT2-209ENST00000553949 TP53I3Q53FA7 332 aa10.55□□□□□ -0.72
SHMT2-209ENST00000553949 VHLLQ6RSH7 139 aa10.55□□□□□ -0.72
SHMT2-209ENST00000553949 UNQ6126/PRO20091Q6UXV3 157 aa10.55□□□□□ -0.72
SHMT2-209ENST00000553949 PLEKHG7Q6ZR37 379 aa10.55□□□□□ -0.72
SHMT2-209ENST00000553949 COLCA1Q6ZS62 124 aa10.55□□□□□ -0.72
SHMT2-209ENST00000553949 FAM220AQ7Z4H9 259 aa10.55□□□□□ -0.72
SHMT2-209ENST00000553949 YIPF7Q8N8F6 280 aa10.55□□□□□ -0.72
SHMT2-209ENST00000553949 OR1J1Q8NGS3 322 aa10.55□□□□□ -0.72
SHMT2-209ENST00000553949 SGCDQ92629 289 aa10.55□□□□□ -0.72
SHMT2-209ENST00000553949 MYDGFQ969H8 173 aa10.55□□□□□ -0.72
SHMT2-209ENST00000553949 APOBEC3DQ96AK3 386 aaPredicted RBP10.55□□□□□ -0.72
SHMT2-209ENST00000553949 MRPL48Q96GC5 212 aaKnown RBP10.55□□□□□ -0.72
SHMT2-209ENST00000553949 MYCBPQ99417 103 aaPredicted RBP10.55□□□□□ -0.72
SHMT2-209ENST00000553949 C1QTNF5Q9BXJ0 243 aa10.55□□□□□ -0.72
SHMT2-209ENST00000553949 BCL2L14Q9BZR8 327 aa10.55□□□□□ -0.72
SHMT2-209ENST00000553949 DUSP21Q9H596 190 aa10.55□□□□□ -0.72
SHMT2-209ENST00000553949 CA10Q9NS85 328 aa10.55□□□□□ -0.72
SHMT2-209ENST00000553949 ACOXLQ9NUZ1 547 aa10.55□□□□□ -0.72
SHMT2-209ENST00000553949 CISD1Q9NZ45 108 aaKnown RBP10.55□□□□□ -0.72
SHMT2-209ENST00000553949 GNG8Q9UK08 70 aa10.55□□□□□ -0.72
SHMT2-209ENST00000553949 BLOC1S6Q9UL45 172 aa10.55□□□□□ -0.72
SHMT2-209ENST00000553949 EXOSC1Q9Y3B2 195 aaKnown RBP10.55□□□□□ -0.72
SHMT2-209ENST00000553949 PKDREJQ9NTG1 2253 aa10.55□□□□□ -0.72
SHMT2-209ENST00000553949 TMEM269A0A1B0GVZ9 245 aa10.54□□□□□ -0.72
SHMT2-209ENST00000553949 J3QW42 95 aa10.54□□□□□ -0.72
SHMT2-209ENST00000553949 HS3ST1O14792 307 aa10.54□□□□□ -0.72
SHMT2-209ENST00000553949 ANXA2P07355 339 aaKnown RBP10.54□□□□□ -0.72
SHMT2-209ENST00000553949 TACSTD2P09758 323 aa10.54□□□□□ -0.72
SHMT2-209ENST00000553949 OR12D2P58182 307 aa10.54□□□□□ -0.72
SHMT2-209ENST00000553949 ERVS71-1P61550 626 aa10.54□□□□□ -0.72
SHMT2-209ENST00000553949 PPP1CBP62140 327 aa10.54□□□□□ -0.72
SHMT2-209ENST00000553949 RPS23P62266 143 aaKnown RBP10.54□□□□□ -0.72
SHMT2-209ENST00000553949 ZNF829Q3KNS6 432 aaPredicted RBP10.54□□□□□ -0.72
SHMT2-209ENST00000553949 SNAI3Q3KNW1 292 aa10.54□□□□□ -0.72
SHMT2-209ENST00000553949 LIPNQ5VXI9 398 aa10.54□□□□□ -0.72
SHMT2-209ENST00000553949 PRSS45Q7RTY3 260 aa10.54□□□□□ -0.72
SHMT2-209ENST00000553949 KCTD20Q7Z5Y7 419 aa10.54□□□□□ -0.72
SHMT2-209ENST00000553949 C1orf174Q8IYL3 243 aa10.54□□□□□ -0.72
SHMT2-209ENST00000553949 SYS1Q8N2H4 156 aa10.54□□□□□ -0.72
SHMT2-209ENST00000553949 TMEM171Q8WVE6 324 aa10.54□□□□□ -0.72
SHMT2-209ENST00000553949 C4orf36Q96KX1 117 aa10.54□□□□□ -0.72
SHMT2-209ENST00000553949 DHRS9Q9BPW9 319 aa10.54□□□□□ -0.72
SHMT2-209ENST00000553949 ZNF442Q9H7R0 627 aa10.54□□□□□ -0.72
SHMT2-209ENST00000553949 PLEKHF2Q9H8W4 249 aa10.54□□□□□ -0.72
SHMT2-209ENST00000553949 BRD7Q9NPI1 651 aa10.54□□□□□ -0.72
SHMT2-209ENST00000553949 FAM206AQ9NX38 181 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms