RNA–Protein interactions for RNA: ENST00000553508.5

PCNX1-205, Transcript of pecanex 1, humanhuman

TSL 3

Gene PCNX1, Length 645 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-205ENST00000553508 HCAR3P49019 387 aa3.72□□□□□ -1.81
PCNX1-205ENST00000553508 ACTR1AP61163 376 aa3.72□□□□□ -1.81
PCNX1-205ENST00000553508 RPL26P61254 145 aaKnown RBP3.72□□□□□ -1.81
PCNX1-205ENST00000553508 MYL5Q02045 173 aa3.72□□□□□ -1.81
PCNX1-205ENST00000553508 KLHL30Q0D2K2 578 aa3.72□□□□□ -1.81
PCNX1-205ENST00000553508 SLAQ13239 276 aa3.72□□□□□ -1.81
PCNX1-205ENST00000553508 CYTH1Q15438 398 aa3.72□□□□□ -1.81
PCNX1-205ENST00000553508 NSUN5P1Q3KNT7 163 aa3.72□□□□□ -1.81
PCNX1-205ENST00000553508 LINC00303Q3SY05 128 aa3.72□□□□□ -1.81
PCNX1-205ENST00000553508 BOLA3Q53S33 107 aa3.72□□□□□ -1.81
PCNX1-205ENST00000553508 LRRC8BQ6P9F7 803 aa3.72□□□□□ -1.81
PCNX1-205ENST00000553508 SASS6Q6UVJ0 657 aa3.72□□□□□ -1.81
PCNX1-205ENST00000553508 KIAA1328Q86T90 577 aa3.72□□□□□ -1.81
PCNX1-205ENST00000553508 OR6X1Q8NH79 312 aa3.72□□□□□ -1.81
PCNX1-205ENST00000553508 ST8SIA1Q92185 356 aa3.72□□□□□ -1.81
PCNX1-205ENST00000553508 N4BP2L2Q92802 583 aaPredicted RBP3.72□□□□□ -1.81
PCNX1-205ENST00000553508 FICDQ9BVA6 458 aa3.72□□□□□ -1.81
PCNX1-205ENST00000553508 POLR1EQ9GZS1 481 aaKnown RBP3.72□□□□□ -1.81
PCNX1-205ENST00000553508 HSD3B7Q9H2F3 369 aa3.72□□□□□ -1.81
PCNX1-205ENST00000553508 LRRC19Q9H756 370 aa3.72□□□□□ -1.81
PCNX1-205ENST00000553508 SUDS3Q9H7L9 328 aaPredicted RBP3.72□□□□□ -1.81
PCNX1-205ENST00000553508 LIN28AQ9H9Z2 209 aaKnown RBP3.72□□□□□ -1.81
PCNX1-205ENST00000553508 POLE3Q9NRF9 147 aa3.72□□□□□ -1.81
PCNX1-205ENST00000553508 SAMSN1Q9NSI8 373 aaKnown RBP3.72□□□□□ -1.81
PCNX1-205ENST00000553508 CHMP5Q9NZZ3 219 aa3.72□□□□□ -1.81
PCNX1-205ENST00000553508 TBK1Q9UHD2 729 aa3.72□□□□□ -1.81
PCNX1-205ENST00000553508 PHF11Q9UIL8 331 aa3.72□□□□□ -1.81
PCNX1-205ENST00000553508 RPL26L1Q9UNX3 145 aaKnown RBP3.72□□□□□ -1.81
PCNX1-205ENST00000553508 SLC17A4Q9Y2C5 497 aa3.72□□□□□ -1.81
PCNX1-205ENST00000553508 SETD2Q9BYW2 2564 aaPredicted RBP3.72□□□□□ -1.81
PCNX1-205ENST00000553508 COL27A1Q8IZC6 1860 aaPredicted RBP3.71□□□□□ -1.82
PCNX1-205ENST00000553508 PPIAL4CA0A0B4J2A2 164 aa3.71□□□□□ -1.82
PCNX1-205ENST00000553508 GPR89AB7ZAQ6 455 aa3.71□□□□□ -1.82
PCNX1-205ENST00000553508 TOX3O15405 576 aaPredicted RBP3.71□□□□□ -1.82
PCNX1-205ENST00000553508 FGF1P05230 155 aa3.71□□□□□ -1.82
PCNX1-205ENST00000553508 GPR89BP0CG08 455 aa3.71□□□□□ -1.82
PCNX1-205ENST00000553508 PPIAL4GP0DN37 164 aa3.71□□□□□ -1.82
PCNX1-205ENST00000553508 CCL4P13236 92 aa3.71□□□□□ -1.82
PCNX1-205ENST00000553508 CRISP2P16562 243 aa3.71□□□□□ -1.82
PCNX1-205ENST00000553508 TCN2P20062 427 aa3.71□□□□□ -1.82
PCNX1-205ENST00000553508 CD1CP29017 333 aa3.71□□□□□ -1.82
PCNX1-205ENST00000553508 PCK1P35558 622 aa3.71□□□□□ -1.82
PCNX1-205ENST00000553508 CDC20Q12834 499 aa3.71□□□□□ -1.82
PCNX1-205ENST00000553508 KLRB1Q12918 225 aa3.71□□□□□ -1.82
PCNX1-205ENST00000553508 PSG5Q15238 335 aa3.71□□□□□ -1.82
PCNX1-205ENST00000553508 HADHQ16836 314 aaKnown RBP3.71□□□□□ -1.82
PCNX1-205ENST00000553508 TRIM16LQ309B1 348 aa3.71□□□□□ -1.82
PCNX1-205ENST00000553508 FILIP1LQ4L180 1135 aa3.71□□□□□ -1.82
PCNX1-205ENST00000553508 KLF17Q5JT82 389 aaPredicted RBP3.71□□□□□ -1.82
PCNX1-205ENST00000553508 C1orf100Q5SVJ3 147 aa3.71□□□□□ -1.82
PCNX1-205ENST00000553508 CCDC122Q5T0U0 273 aa3.71□□□□□ -1.82
PCNX1-205ENST00000553508 BRSK1Q8TDC3 778 aa3.71□□□□□ -1.82
PCNX1-205ENST00000553508 STARD8Q92502 1023 aa3.71□□□□□ -1.82
PCNX1-205ENST00000553508 TRIM44Q96DX7 344 aaPredicted RBP3.71□□□□□ -1.82
PCNX1-205ENST00000553508 FOPNLQ96NB1 174 aa3.71□□□□□ -1.82
PCNX1-205ENST00000553508 SNRNP25Q9BV90 132 aaKnown RBP3.71□□□□□ -1.82
PCNX1-205ENST00000553508 ULBP3Q9BZM4 244 aa3.71□□□□□ -1.82
PCNX1-205ENST00000553508 NXF5Q9H1B4 397 aaKnown RBP3.71□□□□□ -1.82
PCNX1-205ENST00000553508 DPH5Q9H2P9 285 aa3.71□□□□□ -1.82
PCNX1-205ENST00000553508 MRPL40Q9NQ50 206 aaKnown RBP3.71□□□□□ -1.82
PCNX1-205ENST00000553508 FBXO8Q9NRD0 319 aa3.71□□□□□ -1.82
PCNX1-205ENST00000553508 AIPL1Q9NZN9 384 aa3.71□□□□□ -1.82
PCNX1-205ENST00000553508 PCSK1NQ9UHG2 260 aa3.71□□□□□ -1.82
PCNX1-205ENST00000553508 CHMP2BQ9UQN3 213 aa3.71□□□□□ -1.82
PCNX1-205ENST00000553508 POLQO75417 2590 aa3.71□□□□□ -1.82
PCNX1-205ENST00000553508 MTORP42345 2549 aa3.71□□□□□ -1.82
PCNX1-205ENST00000553508 SCN8AQ9UQD0 1980 aa3.71□□□□□ -1.82
PCNX1-205ENST00000553508 ANKRD36A6QL64 1941 aa3.7□□□□□ -1.82
PCNX1-205ENST00000553508 PHF3Q92576 2039 aaKnown RBP3.7□□□□□ -1.82
PCNX1-205ENST00000553508 PDZK1P1A8MUH7 402 aa3.7□□□□□ -1.82
PCNX1-205ENST00000553508 C21orf140B9A014 251 aa3.7□□□□□ -1.82
PCNX1-205ENST00000553508 POLR1CO15160 346 aaPredicted RBP3.7□□□□□ -1.82
PCNX1-205ENST00000553508 HCRTR1O43613 425 aa3.7□□□□□ -1.82
PCNX1-205ENST00000553508 GZMAP12544 262 aa3.7□□□□□ -1.82
PCNX1-205ENST00000553508 ICAM2P13598 275 aa3.7□□□□□ -1.82
PCNX1-205ENST00000553508 AK4P27144 223 aaPredicted RBP3.7□□□□□ -1.82
PCNX1-205ENST00000553508 MIPP30301 263 aa3.7□□□□□ -1.82
PCNX1-205ENST00000553508 CASP14P31944 242 aa3.7□□□□□ -1.82
PCNX1-205ENST00000553508 SSR1P43307 286 aaKnown RBP3.7□□□□□ -1.82
PCNX1-205ENST00000553508 CAMLGP49069 296 aa3.7□□□□□ -1.82
PCNX1-205ENST00000553508 TPM4P67936 248 aa3.7□□□□□ -1.82
PCNX1-205ENST00000553508 PIGHQ14442 188 aaPredicted RBP3.7□□□□□ -1.82
PCNX1-205ENST00000553508 DPYSL2Q16555 572 aa3.7□□□□□ -1.82
PCNX1-205ENST00000553508 DEFB109BQ30KR1 87 aa3.7□□□□□ -1.82
PCNX1-205ENST00000553508 ANKDD1AQ495B1 522 aa3.7□□□□□ -1.82
PCNX1-205ENST00000553508 PYCR3Q53H96 274 aa3.7□□□□□ -1.82
PCNX1-205ENST00000553508 LRRC66Q68CR7 880 aa3.7□□□□□ -1.82
PCNX1-205ENST00000553508 PDPK2PQ6A1A2 396 aa3.7□□□□□ -1.82
PCNX1-205ENST00000553508 CBLN3Q6UW01 205 aa3.7□□□□□ -1.82
PCNX1-205ENST00000553508 TMIGD1Q6UXZ0 262 aa3.7□□□□□ -1.82
PCNX1-205ENST00000553508 C6orf223Q8N319 242 aa3.7□□□□□ -1.82
PCNX1-205ENST00000553508 NPWQ8N729 165 aa3.7□□□□□ -1.82
PCNX1-205ENST00000553508 OR51S1Q8NGJ8 323 aa3.7□□□□□ -1.82
PCNX1-205ENST00000553508 CCL4L1Q8NHW4 92 aa3.7□□□□□ -1.82
PCNX1-205ENST00000553508 SLC37A2Q8TED4 501 aa3.7□□□□□ -1.82
PCNX1-205ENST00000553508 HTR3CQ8WXA8 447 aa3.7□□□□□ -1.82
PCNX1-205ENST00000553508 ARPC1AQ92747 370 aa3.7□□□□□ -1.82
PCNX1-205ENST00000553508 C12orf66Q96MD2 445 aa3.7□□□□□ -1.82
PCNX1-205ENST00000553508 CSPG4P5Q96PW8 444 aa3.7□□□□□ -1.82
PCNX1-205ENST00000553508 HIST1H4GQ99525 98 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms