RNA–Protein interactions for RNA: ENST00000553405.1

MTHFD1-204, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 833 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-204ENST00000553405 THEM6Q8WUY1 208 aa12.77□□□□□ -0.37
MTHFD1-204ENST00000553405 ASB17Q8WXJ9 295 aa12.77□□□□□ -0.37
MTHFD1-204ENST00000553405 NRGNQ92686 78 aa12.77□□□□□ -0.37
MTHFD1-204ENST00000553405 GGHQ92820 318 aa12.77□□□□□ -0.37
MTHFD1-204ENST00000553405 SIGLEC11Q96RL6 698 aa12.77□□□□□ -0.37
MTHFD1-204ENST00000553405 LIME1Q9H400 295 aa12.77□□□□□ -0.37
MTHFD1-204ENST00000553405 CENPMQ9NSP4 180 aa12.77□□□□□ -0.37
MTHFD1-204ENST00000553405 CISD1Q9NZ45 108 aaKnown RBP12.77□□□□□ -0.37
MTHFD1-204ENST00000553405 PSORS1C1Q9UIG5 152 aa12.77□□□□□ -0.37
MTHFD1-204ENST00000553405 LRP12Q9Y561 859 aa12.77□□□□□ -0.37
MTHFD1-204ENST00000553405 TMEM129A0AVI4 362 aa12.76□□□□□ -0.37
MTHFD1-204ENST00000553405 F5H5K5 113 aa12.76□□□□□ -0.37
MTHFD1-204ENST00000553405 J3QW42 95 aa12.76□□□□□ -0.37
MTHFD1-204ENST00000553405 M0R135 149 aa12.76□□□□□ -0.37
MTHFD1-204ENST00000553405 SOD3P08294 240 aa12.76□□□□□ -0.37
MTHFD1-204ENST00000553405 FAM157BP0CG42 384 aa12.76□□□□□ -0.37
MTHFD1-204ENST00000553405 LIMS3P0CW19 117 aa12.76□□□□□ -0.37
MTHFD1-204ENST00000553405 LIMS4P0CW20 117 aa12.76□□□□□ -0.37
MTHFD1-204ENST00000553405 PIPP12273 146 aaPredicted RBP12.76□□□□□ -0.37
MTHFD1-204ENST00000553405 CCNOP22674 350 aa12.76□□□□□ -0.37
MTHFD1-204ENST00000553405 DCTDP32321 178 aa12.76□□□□□ -0.37
MTHFD1-204ENST00000553405 GRB2P62993 217 aaKnown RBP12.76□□□□□ -0.37
MTHFD1-204ENST00000553405 EGR3Q06889 387 aa12.76□□□□□ -0.37
MTHFD1-204ENST00000553405 C11orf71Q6IPW1 123 aa12.76□□□□□ -0.37
MTHFD1-204ENST00000553405 DRAM2Q6UX65 266 aa12.76□□□□□ -0.37
MTHFD1-204ENST00000553405 DTX2Q86UW9 622 aa12.76□□□□□ -0.37
MTHFD1-204ENST00000553405 TMEM200AQ86VY9 491 aa12.76□□□□□ -0.37
MTHFD1-204ENST00000553405 ZNF679Q8IYX0 411 aa12.76□□□□□ -0.37
MTHFD1-204ENST00000553405 OR10H4Q8NGA5 316 aa12.76□□□□□ -0.37
MTHFD1-204ENST00000553405 IPCEF1Q8WWN9 437 aaPredicted RBP12.76□□□□□ -0.37
MTHFD1-204ENST00000553405 SGCDQ92629 289 aa12.76□□□□□ -0.37
MTHFD1-204ENST00000553405 ZNF799Q96GE5 643 aa12.76□□□□□ -0.37
MTHFD1-204ENST00000553405 MARS2Q96GW9 593 aaKnown RBP12.76□□□□□ -0.37
MTHFD1-204ENST00000553405 TBX5Q99593 518 aa12.76□□□□□ -0.37
MTHFD1-204ENST00000553405 DOK1Q99704 481 aa12.76□□□□□ -0.37
MTHFD1-204ENST00000553405 DHRS9Q9BPW9 319 aa12.76□□□□□ -0.37
MTHFD1-204ENST00000553405 COPS4Q9BT78 406 aa12.76□□□□□ -0.37
MTHFD1-204ENST00000553405 TTTY10Q9BZA0 68 aa12.76□□□□□ -0.37
MTHFD1-204ENST00000553405 PAK1IP1Q9NWT1 392 aaPredicted RBP12.76□□□□□ -0.37
MTHFD1-204ENST00000553405 ZNF319Q9P2F9 582 aa12.76□□□□□ -0.37
MTHFD1-204ENST00000553405 STARD10Q9Y365 291 aa12.76□□□□□ -0.37
MTHFD1-204ENST00000553405 ATP23Q9Y6H3 246 aa12.76□□□□□ -0.37
MTHFD1-204ENST00000553405 ARFGEF3Q5TH69 2177 aa12.76□□□□□ -0.37
MTHFD1-204ENST00000553405 ZNF670-ZNF695F2Z2N8 137 aa12.75□□□□□ -0.37
MTHFD1-204ENST00000553405 PSMD9O00233 223 aa12.75□□□□□ -0.37
MTHFD1-204ENST00000553405 SLC1A7O00341 560 aa12.75□□□□□ -0.37
MTHFD1-204ENST00000553405 PHYHO14832 338 aa12.75□□□□□ -0.37
MTHFD1-204ENST00000553405 ZNF254O75437 659 aa12.75□□□□□ -0.37
MTHFD1-204ENST00000553405 ZNF250P15622 560 aa12.75□□□□□ -0.37
MTHFD1-204ENST00000553405 PRKXP51817 358 aa12.75□□□□□ -0.37
MTHFD1-204ENST00000553405 PSMA6P60900 246 aaKnown RBP12.75□□□□□ -0.37
MTHFD1-204ENST00000553405 ACTC1P68032 377 aa12.75□□□□□ -0.37
MTHFD1-204ENST00000553405 ACTA1P68133 377 aa12.75□□□□□ -0.37
MTHFD1-204ENST00000553405 GALK2Q01415 458 aa12.75□□□□□ -0.37
MTHFD1-204ENST00000553405 DOC2BQ14184 412 aa12.75□□□□□ -0.37
MTHFD1-204ENST00000553405 SWI5Q1ZZU3 235 aa12.75□□□□□ -0.37
MTHFD1-204ENST00000553405 SNAI3Q3KNW1 292 aa12.75□□□□□ -0.37
MTHFD1-204ENST00000553405 CDONQ4KMG0 1287 aa12.75□□□□□ -0.37
MTHFD1-204ENST00000553405 ZNF544Q6NX49 715 aa12.75□□□□□ -0.37
MTHFD1-204ENST00000553405 ACBD7Q8N6N7 88 aa12.75□□□□□ -0.37
MTHFD1-204ENST00000553405 FBXW5Q969U6 566 aa12.75□□□□□ -0.37
MTHFD1-204ENST00000553405 SPTSSAQ969W0 71 aa12.75□□□□□ -0.37
MTHFD1-204ENST00000553405 KCNS3Q9BQ31 491 aa12.75□□□□□ -0.37
MTHFD1-204ENST00000553405 BCL2L14Q9BZR8 327 aa12.75□□□□□ -0.37
MTHFD1-204ENST00000553405 OR51B6Q9H340 312 aa12.75□□□□□ -0.37
MTHFD1-204ENST00000553405 ELOVL3Q9HB03 270 aa12.75□□□□□ -0.37
MTHFD1-204ENST00000553405 FAM206AQ9NX38 181 aa12.75□□□□□ -0.37
MTHFD1-204ENST00000553405 ERVK13-1Q9NX77 482 aa12.75□□□□□ -0.37
MTHFD1-204ENST00000553405 CNOT2Q9NZN8 540 aaKnown RBP12.75□□□□□ -0.37
MTHFD1-204ENST00000553405 DIMT1Q9UNQ2 313 aaKnown RBP12.75□□□□□ -0.37
MTHFD1-204ENST00000553405 GRIP1Q9Y3R0 1128 aa12.75□□□□□ -0.37
MTHFD1-204ENST00000553405 DSCAMO60469 2012 aa12.74□□□□□ -0.37
MTHFD1-204ENST00000553405 TEX15Q9BXT5 2789 aa12.74□□□□□ -0.37
MTHFD1-204ENST00000553405 IGLV3-9A0A075B6K5 115 aa12.74□□□□□ -0.37
MTHFD1-204ENST00000553405 FAM20BO75063 409 aa12.74□□□□□ -0.37
MTHFD1-204ENST00000553405 FADS2O95864 444 aaKnown RBP12.74□□□□□ -0.37
MTHFD1-204ENST00000553405 PNPP00491 289 aa12.74□□□□□ -0.37
MTHFD1-204ENST00000553405 H2BFMP0C1H6 154 aa12.74□□□□□ -0.37
MTHFD1-204ENST00000553405 SLC2A1P11166 492 aa12.74□□□□□ -0.37
MTHFD1-204ENST00000553405 APOBEC3AP31941 199 aaPredicted RBP12.74□□□□□ -0.37
MTHFD1-204ENST00000553405 TTKP33981 857 aa12.74□□□□□ -0.37
MTHFD1-204ENST00000553405 RAD52P43351 418 aa12.74□□□□□ -0.37
MTHFD1-204ENST00000553405 CX3CR1P49238 355 aa12.74□□□□□ -0.37
MTHFD1-204ENST00000553405 RGS6P49758 472 aa12.74□□□□□ -0.37
MTHFD1-204ENST00000553405 TPTEP56180 551 aa12.74□□□□□ -0.37
MTHFD1-204ENST00000553405 ZNF121P58317 390 aaPredicted RBP12.74□□□□□ -0.37
MTHFD1-204ENST00000553405 PPP1CBP62140 327 aa12.74□□□□□ -0.37
MTHFD1-204ENST00000553405 SLC35A2P78381 396 aa12.74□□□□□ -0.37
MTHFD1-204ENST00000553405 EFNB3Q15768 340 aa12.74□□□□□ -0.37
MTHFD1-204ENST00000553405 KLHL22Q53GT1 634 aa12.74□□□□□ -0.37
MTHFD1-204ENST00000553405 KCTD18Q6PI47 426 aaPredicted RBP12.74□□□□□ -0.37
MTHFD1-204ENST00000553405 LRP11Q86VZ4 500 aa12.74□□□□□ -0.37
MTHFD1-204ENST00000553405 ZNF485Q8NCK3 441 aa12.74□□□□□ -0.37
MTHFD1-204ENST00000553405 OR1J1Q8NGS3 322 aa12.74□□□□□ -0.37
MTHFD1-204ENST00000553405 ABHD4Q8TB40 342 aa12.74□□□□□ -0.37
MTHFD1-204ENST00000553405 SLC25A40Q8TBP6 338 aa12.74□□□□□ -0.37
MTHFD1-204ENST00000553405 MRPL24Q96A35 216 aaKnown RBP12.74□□□□□ -0.37
MTHFD1-204ENST00000553405 APOBEC3DQ96AK3 386 aaPredicted RBP12.74□□□□□ -0.37
MTHFD1-204ENST00000553405 CNBD2Q96M20 576 aa12.74□□□□□ -0.37
MTHFD1-204ENST00000553405 TRAF4Q9BUZ4 470 aaPredicted RBP12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms