RNA–Protein interactions for RNA: ENST00000548522.5

SSH1-208, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 3

Gene SSH1, Length 602 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-208ENST00000548522 OR2V2Q96R30 315 aa13.8□□□□□ -0.2
SSH1-208ENST00000548522 ELOVL3Q9HB03 270 aa13.8□□□□□ -0.2
SSH1-208ENST00000548522 DCAF13Q9NV06 445 aaKnown RBP13.8□□□□□ -0.2
SSH1-208ENST00000548522 PPP1R3CQ9UQK1 317 aa13.8□□□□□ -0.2
SSH1-208ENST00000548522 MED31Q9Y3C7 131 aa13.8□□□□□ -0.2
SSH1-208ENST00000548522 TRAV27A0A087WT01 109 aa13.79□□□□□ -0.2
SSH1-208ENST00000548522 IGHV3-64DA0A0J9YX35 117 aa13.79□□□□□ -0.2
SSH1-208ENST00000548522 TMEM178BH3BS89 294 aa13.79□□□□□ -0.2
SSH1-208ENST00000548522 IGF2P01344 180 aa13.79□□□□□ -0.2
SSH1-208ENST00000548522 GSTM3P21266 225 aa13.79□□□□□ -0.2
SSH1-208ENST00000548522 KITLGP21583 273 aa13.79□□□□□ -0.2
SSH1-208ENST00000548522 MSR1P21757 451 aa13.79□□□□□ -0.2
SSH1-208ENST00000548522 MDH2P40926 338 aaKnown RBP13.79□□□□□ -0.2
SSH1-208ENST00000548522 HTR5AP47898 357 aa13.79□□□□□ -0.2
SSH1-208ENST00000548522 CTXN1P60606 82 aa13.79□□□□□ -0.2
SSH1-208ENST00000548522 RPL27P61353 136 aaKnown RBP13.79□□□□□ -0.2
SSH1-208ENST00000548522 FHL1Q13642 323 aa13.79□□□□□ -0.2
SSH1-208ENST00000548522 OR5AS1Q8N127 324 aa13.79□□□□□ -0.2
SSH1-208ENST00000548522 OR10AD1Q8NGE0 317 aa13.79□□□□□ -0.2
SSH1-208ENST00000548522 ZNF420Q8TAQ5 688 aaPredicted RBP13.79□□□□□ -0.2
SSH1-208ENST00000548522 TMIGD2Q96BF3 282 aa13.79□□□□□ -0.2
SSH1-208ENST00000548522 CMBLQ96DG6 245 aa13.79□□□□□ -0.2
SSH1-208ENST00000548522 CHID1Q9BWS9 393 aa13.79□□□□□ -0.2
SSH1-208ENST00000548522 GCM1Q9NP62 436 aa13.79□□□□□ -0.2
SSH1-208ENST00000548522 POLE4Q9NR33 117 aa13.79□□□□□ -0.2
SSH1-208ENST00000548522 SAMD4AQ9UPU9 718 aaKnown RBP13.79□□□□□ -0.2
SSH1-208ENST00000548522 STARD10Q9Y365 291 aa13.79□□□□□ -0.2
SSH1-208ENST00000548522 POM121CA8CG34 1229 aa13.78□□□□□ -0.2
SSH1-208ENST00000548522 HOXA3O43365 443 aaPredicted RBP13.78□□□□□ -0.2
SSH1-208ENST00000548522 DOK2O60496 412 aa13.78□□□□□ -0.2
SSH1-208ENST00000548522 CYB5R3P00387 301 aaPredicted RBP13.78□□□□□ -0.2
SSH1-208ENST00000548522 PLATP00750 562 aa13.78□□□□□ -0.2
SSH1-208ENST00000548522 NR2C1P13056 603 aa13.78□□□□□ -0.2
SSH1-208ENST00000548522 IFI30P13284 250 aa13.78□□□□□ -0.2
SSH1-208ENST00000548522 TNFRSF1AP19438 455 aa13.78□□□□□ -0.2
SSH1-208ENST00000548522 TNFSF4P23510 183 aa13.78□□□□□ -0.2
SSH1-208ENST00000548522 MAGEA2P43356 314 aa13.78□□□□□ -0.2
SSH1-208ENST00000548522 PCBD1P61457 104 aa13.78□□□□□ -0.2
SSH1-208ENST00000548522 C1orf94Q6P1W5 598 aa13.78□□□□□ -0.2
SSH1-208ENST00000548522 BRD3OSQ6XYD6 125 aa13.78□□□□□ -0.2
SSH1-208ENST00000548522 C9orf139Q6ZV77 190 aa13.78□□□□□ -0.2
SSH1-208ENST00000548522 ZER1Q7Z7L7 766 aa13.78□□□□□ -0.2
SSH1-208ENST00000548522 C1orf174Q8IYL3 243 aa13.78□□□□□ -0.2
SSH1-208ENST00000548522 NPEPL1Q8NDH3 523 aa13.78□□□□□ -0.2
SSH1-208ENST00000548522 RASSF5Q8WWW0 418 aa13.78□□□□□ -0.2
SSH1-208ENST00000548522 DACT3Q96B18 629 aaPredicted RBP13.78□□□□□ -0.2
SSH1-208ENST00000548522 UPRTQ96BW1 309 aa13.78□□□□□ -0.2
SSH1-208ENST00000548522 RBP7Q96R05 134 aa13.78□□□□□ -0.2
SSH1-208ENST00000548522 SSBP3Q9BWW4 388 aaPredicted RBP13.78□□□□□ -0.2
SSH1-208ENST00000548522 ANKRD60Q9BZ19 345 aa13.78□□□□□ -0.2
SSH1-208ENST00000548522 SLITRK2Q9H156 845 aa13.78□□□□□ -0.2
SSH1-208ENST00000548522 TNFRSF19Q9NS68 423 aa13.78□□□□□ -0.2
SSH1-208ENST00000548522 MAN2C1Q9NTJ4 1040 aa13.78□□□□□ -0.2
SSH1-208ENST00000548522 DNAJB9Q9UBS3 223 aa13.78□□□□□ -0.2
SSH1-208ENST00000548522 IL19Q9UHD0 177 aa13.78□□□□□ -0.2
SSH1-208ENST00000548522 RPS6KA6Q9UK32 745 aa13.78□□□□□ -0.2
SSH1-208ENST00000548522 NDRG4Q9ULP0 352 aaKnown RBP13.78□□□□□ -0.2
SSH1-208ENST00000548522 IGHV2-70DA0A0C4DH43 119 aa13.77□□□□□ -0.21
SSH1-208ENST00000548522 C12orf71A8MTZ7 269 aa13.77□□□□□ -0.21
SSH1-208ENST00000548522 TNFAIP8O95379 198 aa13.77□□□□□ -0.21
SSH1-208ENST00000548522 WNT2P09544 360 aa13.77□□□□□ -0.21
SSH1-208ENST00000548522 RPS2P15880 293 aaKnown RBP13.77□□□□□ -0.21
SSH1-208ENST00000548522 NCK1P16333 377 aa13.77□□□□□ -0.21
SSH1-208ENST00000548522 SELEP16581 610 aa13.77□□□□□ -0.21
SSH1-208ENST00000548522 HLXQ14774 488 aaPredicted RBP13.77□□□□□ -0.21
SSH1-208ENST00000548522 FAM201AQ5SY85 155 aa13.77□□□□□ -0.21
SSH1-208ENST00000548522 VASH1Q7L8A9 365 aaPredicted RBP13.77□□□□□ -0.21
SSH1-208ENST00000548522 AMIGO2Q86SJ2 522 aa13.77□□□□□ -0.21
SSH1-208ENST00000548522 OR13C2Q8NGS9 318 aa13.77□□□□□ -0.21
SSH1-208ENST00000548522 OR51A7Q8NH64 312 aa13.77□□□□□ -0.21
SSH1-208ENST00000548522 WFDC12Q8WWY7 111 aa13.77□□□□□ -0.21
SSH1-208ENST00000548522 FAM162AQ96A26 154 aa13.77□□□□□ -0.21
SSH1-208ENST00000548522 BPIFA2Q96DR5 249 aa13.77□□□□□ -0.21
SSH1-208ENST00000548522 FAM192AQ9GZU8 254 aa13.77□□□□□ -0.21
SSH1-208ENST00000548522 WNK1Q9H4A3 2382 aa13.77□□□□□ -0.21
SSH1-208ENST00000548522 TBCCD1Q9NVR7 557 aa13.77□□□□□ -0.21
SSH1-208ENST00000548522 PDP1Q9P0J1 537 aaPredicted RBP13.77□□□□□ -0.21
SSH1-208ENST00000548522 BAG5Q9UL15 447 aa13.77□□□□□ -0.21
SSH1-208ENST00000548522 A4GNTQ9UNA3 340 aa13.77□□□□□ -0.21
SSH1-208ENST00000548522 ADAM18Q9Y3Q7 739 aa13.77□□□□□ -0.21
SSH1-208ENST00000548522 DBHP09172 617 aa13.76□□□□□ -0.21
SSH1-208ENST00000548522 MTNR1AP48039 350 aa13.76□□□□□ -0.21
SSH1-208ENST00000548522 HOXA4Q00056 320 aaPredicted RBP13.76□□□□□ -0.21
SSH1-208ENST00000548522 DEFB112Q30KQ8 113 aa13.76□□□□□ -0.21
SSH1-208ENST00000548522 C16orf87Q6PH81 154 aa13.76□□□□□ -0.21
SSH1-208ENST00000548522 ARL9Q6T311 187 aa13.76□□□□□ -0.21
SSH1-208ENST00000548522 KLBQ86Z14 1044 aa13.76□□□□□ -0.21
SSH1-208ENST00000548522 NRMQ8IXM6 262 aa13.76□□□□□ -0.21
SSH1-208ENST00000548522 TFAP2CQ92754 450 aa13.76□□□□□ -0.21
SSH1-208ENST00000548522 CIB1Q99828 191 aa13.76□□□□□ -0.21
SSH1-208ENST00000548522 POLR2J2Q9GZM3 115 aaKnown RBP13.76□□□□□ -0.21
SSH1-208ENST00000548522 POLR2J3Q9H1A7 115 aaKnown RBP13.76□□□□□ -0.21
SSH1-208ENST00000548522 SEMA6AQ9H2E6 1030 aa13.76□□□□□ -0.21
SSH1-208ENST00000548522 TMEM165Q9HC07 324 aa13.76□□□□□ -0.21
SSH1-208ENST00000548522 RHCGQ9UBD6 479 aa13.76□□□□□ -0.21
SSH1-208ENST00000548522 FAM181BA6NEQ2 426 aa13.75□□□□□ -0.21
SSH1-208ENST00000548522 H0YAE9 185 aa13.75□□□□□ -0.21
SSH1-208ENST00000548522 H0YL77 283 aa13.75□□□□□ -0.21
SSH1-208ENST00000548522 IMPA2O14732 288 aa13.75□□□□□ -0.21
SSH1-208ENST00000548522 SGCEO43556 437 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms