RNA–Protein interactions for RNA: ENST00000543002.5

RABGGTA-203, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 1,329 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-203ENST00000543002 DEFB113Q30KQ7 82 aa14.7□□□□□ -0.06
RABGGTA-203ENST00000543002 COLCA1Q6ZS62 124 aa14.7□□□□□ -0.06
RABGGTA-203ENST00000543002 SLC35F2Q8IXU6 374 aa14.7□□□□□ -0.06
RABGGTA-203ENST00000543002 SETD9Q8NE22 299 aa14.7□□□□□ -0.06
RABGGTA-203ENST00000543002 SLC25A40Q8TBP6 338 aa14.7□□□□□ -0.06
RABGGTA-203ENST00000543002 APOBEC3DQ96AK3 386 aaPredicted RBP14.7□□□□□ -0.06
RABGGTA-203ENST00000543002 ZNF799Q96GE5 643 aa14.7□□□□□ -0.06
RABGGTA-203ENST00000543002 MARS2Q96GW9 593 aaKnown RBP14.7□□□□□ -0.06
RABGGTA-203ENST00000543002 COG8Q96MW5 612 aa14.7□□□□□ -0.06
RABGGTA-203ENST00000543002 C1QTNF5Q9BXJ0 243 aa14.7□□□□□ -0.06
RABGGTA-203ENST00000543002 MRPL37Q9BZE1 423 aaKnown RBP14.7□□□□□ -0.06
RABGGTA-203ENST00000543002 TUBG2Q9NRH3 451 aa14.7□□□□□ -0.06
RABGGTA-203ENST00000543002 BEX4Q9NWD9 120 aaPredicted RBP14.7□□□□□ -0.06
RABGGTA-203ENST00000543002 STARD10Q9Y365 291 aa14.7□□□□□ -0.06
RABGGTA-203ENST00000543002 H3BSA7 217 aa14.69□□□□□ -0.06
RABGGTA-203ENST00000543002 H2BFMP0C1H6 154 aa14.69□□□□□ -0.06
RABGGTA-203ENST00000543002 MTNR1AP48039 350 aa14.69□□□□□ -0.06
RABGGTA-203ENST00000543002 AQP4P55087 323 aa14.69□□□□□ -0.06
RABGGTA-203ENST00000543002 MAD2L1BPQ15013 274 aaPredicted RBP14.69□□□□□ -0.06
RABGGTA-203ENST00000543002 ZNF718Q3SXZ3 478 aa14.69□□□□□ -0.06
RABGGTA-203ENST00000543002 KCTD18Q6PI47 426 aaPredicted RBP14.69□□□□□ -0.06
RABGGTA-203ENST00000543002 DRAM2Q6UX65 266 aa14.69□□□□□ -0.06
RABGGTA-203ENST00000543002 NAA40Q86UY6 237 aa14.69□□□□□ -0.06
RABGGTA-203ENST00000543002 LRP11Q86VZ4 500 aa14.69□□□□□ -0.06
RABGGTA-203ENST00000543002 SYNPRQ8TBG9 265 aa14.69□□□□□ -0.06
RABGGTA-203ENST00000543002 APH1BQ8WW43 257 aa14.69□□□□□ -0.06
RABGGTA-203ENST00000543002 ASB17Q8WXJ9 295 aa14.69□□□□□ -0.06
RABGGTA-203ENST00000543002 DOK1Q99704 481 aa14.69□□□□□ -0.06
RABGGTA-203ENST00000543002 OR2J1Q9GZK6 312 aa14.69□□□□□ -0.06
RABGGTA-203ENST00000543002 ZNF701Q9NV72 531 aaPredicted RBP14.69□□□□□ -0.06
RABGGTA-203ENST00000543002 FZR1Q9UM11 496 aa14.69□□□□□ -0.06
RABGGTA-203ENST00000543002 COPS3Q9UNS2 423 aa14.69□□□□□ -0.06
RABGGTA-203ENST00000543002 HSPE1-MOB4S4R3N1 261 aa14.69□□□□□ -0.06
RABGGTA-203ENST00000543002 IGLV3-9A0A075B6K5 115 aa14.68□□□□□ -0.06
RABGGTA-203ENST00000543002 PHYHO14832 338 aa14.68□□□□□ -0.06
RABGGTA-203ENST00000543002 APOL3O95236 402 aa14.68□□□□□ -0.06
RABGGTA-203ENST00000543002 APOC1P02654 83 aa14.68□□□□□ -0.06
RABGGTA-203ENST00000543002 BMP4P12644 408 aa14.68□□□□□ -0.06
RABGGTA-203ENST00000543002 PAX1P15863 534 aa14.68□□□□□ -0.06
RABGGTA-203ENST00000543002 HSD11B1P28845 292 aa14.68□□□□□ -0.06
RABGGTA-203ENST00000543002 ATP6V1E1P36543 226 aa14.68□□□□□ -0.06
RABGGTA-203ENST00000543002 PRKXP51817 358 aa14.68□□□□□ -0.06
RABGGTA-203ENST00000543002 KLF3P57682 345 aaPredicted RBP14.68□□□□□ -0.06
RABGGTA-203ENST00000543002 SELENOVP59797 346 aa14.68□□□□□ -0.06
RABGGTA-203ENST00000543002 ISL1P61371 349 aa14.68□□□□□ -0.06
RABGGTA-203ENST00000543002 SNRPD2P62316 118 aaKnown RBP14.68□□□□□ -0.06
RABGGTA-203ENST00000543002 SPATA46Q5T0L3 261 aa14.68□□□□□ -0.06
RABGGTA-203ENST00000543002 MBNL2Q5VZF2 373 aaKnown RBP14.68□□□□□ -0.06
RABGGTA-203ENST00000543002 DEGS2Q6QHC5 323 aa14.68□□□□□ -0.06
RABGGTA-203ENST00000543002 HIST2H2ABQ8IUE6 130 aaPredicted RBP14.68□□□□□ -0.06
RABGGTA-203ENST00000543002 OR5L1Q8NGL2 311 aa14.68□□□□□ -0.06
RABGGTA-203ENST00000543002 KLF14Q8TD94 323 aaPredicted RBP14.68□□□□□ -0.06
RABGGTA-203ENST00000543002 TFAP2CQ92754 450 aa14.68□□□□□ -0.06
RABGGTA-203ENST00000543002 RNFT2Q96EX2 444 aa14.68□□□□□ -0.06
RABGGTA-203ENST00000543002 SYT3Q9BQG1 590 aa14.68□□□□□ -0.06
RABGGTA-203ENST00000543002 CACNG6Q9BXT2 260 aa14.68□□□□□ -0.06
RABGGTA-203ENST00000543002 DUSP13Q9UII6 198 aa14.68□□□□□ -0.06
RABGGTA-203ENST00000543002 FBXO9Q9UK97 447 aaPredicted RBP14.68□□□□□ -0.06
RABGGTA-203ENST00000543002 PMF1-BGLAPU3KQ54 211 aa14.68□□□□□ -0.06
RABGGTA-203ENST00000543002 ZNF670-ZNF695F2Z2N8 137 aa14.67□□□□□ -0.06
RABGGTA-203ENST00000543002 WBP4O75554 376 aaKnown RBP14.67□□□□□ -0.06
RABGGTA-203ENST00000543002 CLPTM1O96005 669 aa14.67□□□□□ -0.06
RABGGTA-203ENST00000543002 LCATP04180 440 aa14.67□□□□□ -0.06
RABGGTA-203ENST00000543002 GNAO1P09471 354 aa14.67□□□□□ -0.06
RABGGTA-203ENST00000543002 OR2T7P0C7T2 308 aa14.67□□□□□ -0.06
RABGGTA-203ENST00000543002 GCH1P30793 250 aa14.67□□□□□ -0.06
RABGGTA-203ENST00000543002 CDKN1AP38936 164 aa14.67□□□□□ -0.06
RABGGTA-203ENST00000543002 SLC6A9P48067 706 aa14.67□□□□□ -0.06
RABGGTA-203ENST00000543002 CXCR4P61073 352 aa14.67□□□□□ -0.06
RABGGTA-203ENST00000543002 ROM1Q03395 351 aa14.67□□□□□ -0.06
RABGGTA-203ENST00000543002 ZNF91Q05481 1191 aa14.67□□□□□ -0.06
RABGGTA-203ENST00000543002 LRRN1Q6UXK5 716 aa14.67□□□□□ -0.06
RABGGTA-203ENST00000543002 USP51Q70EK9 711 aa14.67□□□□□ -0.06
RABGGTA-203ENST00000543002 KRT77Q7Z794 578 aa14.67□□□□□ -0.06
RABGGTA-203ENST00000543002 C8orf59Q8N0T1 100 aaPredicted RBP14.67□□□□□ -0.06
RABGGTA-203ENST00000543002 ZNF283Q8N7M2 679 aa14.67□□□□□ -0.06
RABGGTA-203ENST00000543002 OR2T27Q8NH04 317 aa14.67□□□□□ -0.06
RABGGTA-203ENST00000543002 OR8B4Q96RC9 309 aa14.67□□□□□ -0.06
RABGGTA-203ENST00000543002 GSX2Q9BZM3 304 aa14.67□□□□□ -0.06
RABGGTA-203ENST00000543002 POFUT1Q9H488 388 aa14.67□□□□□ -0.06
RABGGTA-203ENST00000543002 NIPAL2Q9H841 368 aa14.67□□□□□ -0.06
RABGGTA-203ENST00000543002 SLCO1C1Q9NYB5 712 aa14.67□□□□□ -0.06
RABGGTA-203ENST00000543002 MYEF2Q9P2K5 600 aaKnown RBP14.67□□□□□ -0.06
RABGGTA-203ENST00000543002 USF3Q68DE3 2245 aa14.67□□□□□ -0.06
RABGGTA-203ENST00000543002 PRR32B1ATL7 298 aa14.66□□□□□ -0.06
RABGGTA-203ENST00000543002 H7C417 338 aa14.66□□□□□ -0.06
RABGGTA-203ENST00000543002 ZNF254O75437 659 aa14.66□□□□□ -0.06
RABGGTA-203ENST00000543002 IGHV3-13P01766 116 aa14.66□□□□□ -0.06
RABGGTA-203ENST00000543002 DBTP11182 482 aaKnown RBP14.66□□□□□ -0.06
RABGGTA-203ENST00000543002 MPV17P39210 176 aa14.66□□□□□ -0.06
RABGGTA-203ENST00000543002 CX3CR1P49238 355 aa14.66□□□□□ -0.06
RABGGTA-203ENST00000543002 ZNF322Q6U7Q0 402 aaPredicted RBP14.66□□□□□ -0.06
RABGGTA-203ENST00000543002 ZNF679Q8IYX0 411 aa14.66□□□□□ -0.06
RABGGTA-203ENST00000543002 LRRC75A-AS1Q8N1F1 130 aa14.66□□□□□ -0.06
RABGGTA-203ENST00000543002 RFLNBQ8N5W9 214 aa14.66□□□□□ -0.06
RABGGTA-203ENST00000543002 CNIH3Q8TBE1 160 aa14.66□□□□□ -0.06
RABGGTA-203ENST00000543002 TRMT61AQ96FX7 289 aaKnown RBP14.66□□□□□ -0.06
RABGGTA-203ENST00000543002 FOXC2Q99958 501 aa14.66□□□□□ -0.06
RABGGTA-203ENST00000543002 MROQ9BYG7 248 aa14.66□□□□□ -0.06
RABGGTA-203ENST00000543002 PTTG3PQ9NZH4 202 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms