RNA–Protein interactions for RNA: ENST00000540804.5

MSRB3-209, Transcript of methionine sulfoxide reductase B3, humanhuman

TSL 2 BASIC

Gene MSRB3, Length 884 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRB3-209ENST00000540804 CLEC12AQ5QGZ9 265 aa12.15□□□□□ -0.46
MSRB3-209ENST00000540804 PGBD2Q6P3X8 592 aa12.15□□□□□ -0.46
MSRB3-209ENST00000540804 DNM1P34Q6PK57 102 aa12.15□□□□□ -0.46
MSRB3-209ENST00000540804 LYPD4Q6UWN0 246 aa12.15□□□□□ -0.46
MSRB3-209ENST00000540804 USP43Q70EL4 1123 aa12.15□□□□□ -0.46
MSRB3-209ENST00000540804 CPLX4Q7Z7G2 160 aa12.15□□□□□ -0.46
MSRB3-209ENST00000540804 MOGAT3Q86VF5 341 aa12.15□□□□□ -0.46
MSRB3-209ENST00000540804 KLHL36Q8N4N3 616 aa12.15□□□□□ -0.46
MSRB3-209ENST00000540804 SPICQ8N5J4 248 aa12.15□□□□□ -0.46
MSRB3-209ENST00000540804 C19orf18Q8NEA5 215 aa12.15□□□□□ -0.46
MSRB3-209ENST00000540804 OR9Q2Q8NGE9 314 aa12.15□□□□□ -0.46
MSRB3-209ENST00000540804 OR52E2Q8NGJ4 325 aa12.15□□□□□ -0.46
MSRB3-209ENST00000540804 FAM216AQ8WUB2 273 aa12.15□□□□□ -0.46
MSRB3-209ENST00000540804 ZFAND2BQ8WV99 257 aa12.15□□□□□ -0.46
MSRB3-209ENST00000540804 APOBEC3DQ96AK3 386 aaPredicted RBP12.15□□□□□ -0.46
MSRB3-209ENST00000540804 NSMCE2Q96MF7 247 aa12.15□□□□□ -0.46
MSRB3-209ENST00000540804 COQ7Q99807 217 aa12.15□□□□□ -0.46
MSRB3-209ENST00000540804 HDHD2Q9H0R4 259 aa12.15□□□□□ -0.46
MSRB3-209ENST00000540804 PNRC2Q9NPJ4 139 aaKnown RBP12.15□□□□□ -0.46
MSRB3-209ENST00000540804 TUBG2Q9NRH3 451 aa12.15□□□□□ -0.46
MSRB3-209ENST00000540804 MRPL22Q9NWU5 206 aaKnown RBP12.15□□□□□ -0.46
MSRB3-209ENST00000540804 ZNF69Q9UC07 566 aa12.15□□□□□ -0.46
MSRB3-209ENST00000540804 MAGEL2Q9UJ55 1249 aa12.15□□□□□ -0.46
MSRB3-209ENST00000540804 TVP23AA6NH52 213 aa12.14□□□□□ -0.47
MSRB3-209ENST00000540804 TRIM77I1YAP6 450 aa12.14□□□□□ -0.47
MSRB3-209ENST00000540804 ARPC3O15145 178 aa12.14□□□□□ -0.47
MSRB3-209ENST00000540804 HLA-DQA2P01906 255 aa12.14□□□□□ -0.47
MSRB3-209ENST00000540804 ACSM4P0C7M7 580 aa12.14□□□□□ -0.47
MSRB3-209ENST00000540804 ZNF12P17014 697 aa12.14□□□□□ -0.47
MSRB3-209ENST00000540804 GATA3P23771 443 aa12.14□□□□□ -0.47
MSRB3-209ENST00000540804 GGT2P36268 569 aa12.14□□□□□ -0.47
MSRB3-209ENST00000540804 RGS6P49758 472 aa12.14□□□□□ -0.47
MSRB3-209ENST00000540804 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.14□□□□□ -0.47
MSRB3-209ENST00000540804 ZNF154Q13106 437 aa12.14□□□□□ -0.47
MSRB3-209ENST00000540804 CYP2R1Q6VVX0 501 aa12.14□□□□□ -0.47
MSRB3-209ENST00000540804 ZNF620Q6ZNG0 422 aa12.14□□□□□ -0.47
MSRB3-209ENST00000540804 ZDHHC21Q8IVQ6 265 aa12.14□□□□□ -0.47
MSRB3-209ENST00000540804 PGAM4Q8N0Y7 254 aa12.14□□□□□ -0.47
MSRB3-209ENST00000540804 SIGLECL1Q8N7X8 197 aa12.14□□□□□ -0.47
MSRB3-209ENST00000540804 CYB561A3Q8NBI2 242 aa12.14□□□□□ -0.47
MSRB3-209ENST00000540804 OR51L1Q8NGJ5 315 aa12.14□□□□□ -0.47
MSRB3-209ENST00000540804 GNPDA2Q8TDQ7 276 aa12.14□□□□□ -0.47
MSRB3-209ENST00000540804 TAF15Q92804 592 aaKnown RBP eCLIP12.14□□□□□ -0.47
MSRB3-209ENST00000540804 GCDHQ92947 438 aaPredicted RBP12.14□□□□□ -0.47
MSRB3-209ENST00000540804 COG8Q96MW5 612 aa12.14□□□□□ -0.47
MSRB3-209ENST00000540804 ZNF582Q96NG8 517 aaPredicted RBP12.14□□□□□ -0.47
MSRB3-209ENST00000540804 PITX2Q99697 317 aa12.14□□□□□ -0.47
MSRB3-209ENST00000540804 SLC30A2Q9BRI3 323 aa12.14□□□□□ -0.47
MSRB3-209ENST00000540804 SUCNR1Q9BXA5 334 aa12.14□□□□□ -0.47
MSRB3-209ENST00000540804 PLA2G12AQ9BZM1 189 aa12.14□□□□□ -0.47
MSRB3-209ENST00000540804 TMEM165Q9HC07 324 aa12.14□□□□□ -0.47
MSRB3-209ENST00000540804 ATPIF1Q9UII2 106 aa12.14□□□□□ -0.47
MSRB3-209ENST00000540804 INSIG2Q9Y5U4 225 aa12.14□□□□□ -0.47
MSRB3-209ENST00000540804 AUP1Q9Y679 476 aa12.14□□□□□ -0.47
MSRB3-209ENST00000540804 TENM1Q9UKZ4 2725 aa12.14□□□□□ -0.47
MSRB3-209ENST00000540804 TANC2Q9HCD6 1990 aa12.14□□□□□ -0.47
MSRB3-209ENST00000540804 TMEM89A2RUT3 159 aa12.13□□□□□ -0.47
MSRB3-209ENST00000540804 IQCF6A8MYZ5 107 aa12.13□□□□□ -0.47
MSRB3-209ENST00000540804 SURF4O15260 269 aa12.13□□□□□ -0.47
MSRB3-209ENST00000540804 WNT2P09544 360 aa12.13□□□□□ -0.47
MSRB3-209ENST00000540804 ATP6V1B2P21281 511 aa12.13□□□□□ -0.47
MSRB3-209ENST00000540804 NOS3P29474 1203 aa12.13□□□□□ -0.47
MSRB3-209ENST00000540804 MDH2P40926 338 aaKnown RBP12.13□□□□□ -0.47
MSRB3-209ENST00000540804 SMIM11AP58511 58 aa12.13□□□□□ -0.47
MSRB3-209ENST00000540804 GK2Q14410 553 aaPredicted RBP12.13□□□□□ -0.47
MSRB3-209ENST00000540804 COLCA1Q6ZS62 124 aa12.13□□□□□ -0.47
MSRB3-209ENST00000540804 ZBTB46Q86UZ6 589 aa12.13□□□□□ -0.47
MSRB3-209ENST00000540804 DEFB107AQ8IZN7 70 aa12.13□□□□□ -0.47
MSRB3-209ENST00000540804 TEX29Q8N6K0 151 aa12.13□□□□□ -0.47
MSRB3-209ENST00000540804 OR5L1Q8NGL2 311 aa12.13□□□□□ -0.47
MSRB3-209ENST00000540804 OR8D4Q8NGM9 314 aa12.13□□□□□ -0.47
MSRB3-209ENST00000540804 OR10S1Q8NGN2 331 aa12.13□□□□□ -0.47
MSRB3-209ENST00000540804 OR13G1Q8NGZ3 307 aa12.13□□□□□ -0.47
MSRB3-209ENST00000540804 MCUR1Q96AQ8 359 aa12.13□□□□□ -0.47
MSRB3-209ENST00000540804 SLCO4A1Q96BD0 722 aa12.13□□□□□ -0.47
MSRB3-209ENST00000540804 MAP6Q96JE9 813 aa12.13□□□□□ -0.47
MSRB3-209ENST00000540804 ZNF48Q96MX3 618 aaPredicted RBP12.13□□□□□ -0.47
MSRB3-209ENST00000540804 BTBD10Q9BSF8 475 aa12.13□□□□□ -0.47
MSRB3-209ENST00000540804 CDADC1Q9BWV3 514 aa12.13□□□□□ -0.47
MSRB3-209ENST00000540804 IL1RAPQ9NPH3 570 aa12.13□□□□□ -0.47
MSRB3-209ENST00000540804 CYB5R1Q9UHQ9 305 aa12.13□□□□□ -0.47
MSRB3-209ENST00000540804 TAGLN3Q9UI15 199 aa12.13□□□□□ -0.47
MSRB3-209ENST00000540804 TMCC3Q9ULS5 477 aa12.13□□□□□ -0.47
MSRB3-209ENST00000540804 ARHGAP32A7KAX9 2087 aa12.13□□□□□ -0.47
MSRB3-209ENST00000540804 PPIAL4EA0A075B759 164 aa12.12□□□□□ -0.47
MSRB3-209ENST00000540804 PPIAL4CA0A0B4J2A2 164 aa12.12□□□□□ -0.47
MSRB3-209ENST00000540804 PPIAL4DF5H284 164 aa12.12□□□□□ -0.47
MSRB3-209ENST00000540804 J3QW42 95 aa12.12□□□□□ -0.47
MSRB3-209ENST00000540804 LCATP04180 440 aa12.12□□□□□ -0.47
MSRB3-209ENST00000540804 PPIAL4FP0DN26 164 aa12.12□□□□□ -0.47
MSRB3-209ENST00000540804 CD80P33681 288 aa12.12□□□□□ -0.47
MSRB3-209ENST00000540804 UBA52P62987 128 aaKnown RBP12.12□□□□□ -0.47
MSRB3-209ENST00000540804 GNGT1P63211 74 aa12.12□□□□□ -0.47
MSRB3-209ENST00000540804 TRAP1Q12931 704 aaKnown RBP12.12□□□□□ -0.47
MSRB3-209ENST00000540804 TSPAN31Q12999 210 aa12.12□□□□□ -0.47
MSRB3-209ENST00000540804 MAB21L1Q13394 359 aa12.12□□□□□ -0.47
MSRB3-209ENST00000540804 ARMCX4Q5H9R4 360 aa12.12□□□□□ -0.47
MSRB3-209ENST00000540804 SAMD4BQ5PRF9 694 aaKnown RBP12.12□□□□□ -0.47
MSRB3-209ENST00000540804 PRAMEF6Q5VXH4 476 aa12.12□□□□□ -0.47
MSRB3-209ENST00000540804 LYPD2Q6UXB3 125 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms