RNA–Protein interactions for RNA: ENST00000540784.5

DDB1-218, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 1,119 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-218ENST00000540784 SWI5Q1ZZU3 235 aa13.33□□□□□ -0.28
DDB1-218ENST00000540784 DRAM2Q6UX65 266 aa13.33□□□□□ -0.28
DDB1-218ENST00000540784 KRT77Q7Z794 578 aa13.33□□□□□ -0.28
DDB1-218ENST00000540784 C8orf59Q8N0T1 100 aaPredicted RBP13.33□□□□□ -0.28
DDB1-218ENST00000540784 OR2T27Q8NH04 317 aa13.33□□□□□ -0.28
DDB1-218ENST00000540784 SLC25A40Q8TBP6 338 aa13.33□□□□□ -0.28
DDB1-218ENST00000540784 APOBEC3DQ96AK3 386 aaPredicted RBP13.33□□□□□ -0.28
DDB1-218ENST00000540784 ZNF799Q96GE5 643 aa13.33□□□□□ -0.28
DDB1-218ENST00000540784 CXorf56Q9H5V9 222 aa13.33□□□□□ -0.28
DDB1-218ENST00000540784 RPL36Q9Y3U8 105 aaKnown RBP13.33□□□□□ -0.28
DDB1-218ENST00000540784 PMF1-BGLAPU3KQ54 211 aa13.33□□□□□ -0.28
DDB1-218ENST00000540784 SETXQ7Z333 2677 aaKnown RBP13.33□□□□□ -0.28
DDB1-218ENST00000540784 HRNRQ86YZ3 2850 aaPredicted RBP13.32□□□□□ -0.28
DDB1-218ENST00000540784 TACC2O95359 2948 aa13.32□□□□□ -0.28
DDB1-218ENST00000540784 TMEM129A0AVI4 362 aa13.32□□□□□ -0.28
DDB1-218ENST00000540784 PHYHO14832 338 aa13.32□□□□□ -0.28
DDB1-218ENST00000540784 APOL3O95236 402 aa13.32□□□□□ -0.28
DDB1-218ENST00000540784 ZNF250P15622 560 aa13.32□□□□□ -0.28
DDB1-218ENST00000540784 OPRL1P41146 370 aa13.32□□□□□ -0.28
DDB1-218ENST00000540784 SLC6A9P48067 706 aa13.32□□□□□ -0.28
DDB1-218ENST00000540784 ERVS71-1P61550 626 aa13.32□□□□□ -0.28
DDB1-218ENST00000540784 SNRPD2P62316 118 aaKnown RBP13.32□□□□□ -0.28
DDB1-218ENST00000540784 MOGQ16653 247 aa13.32□□□□□ -0.28
DDB1-218ENST00000540784 SPATA46Q5T0L3 261 aa13.32□□□□□ -0.28
DDB1-218ENST00000540784 C6orf52Q5T4I8 152 aa13.32□□□□□ -0.28
DDB1-218ENST00000540784 DEGS2Q6QHC5 323 aa13.32□□□□□ -0.28
DDB1-218ENST00000540784 COLCA1Q6ZS62 124 aa13.32□□□□□ -0.28
DDB1-218ENST00000540784 RFPL4BQ6ZWI9 263 aa13.32□□□□□ -0.28
DDB1-218ENST00000540784 LRP11Q86VZ4 500 aa13.32□□□□□ -0.28
DDB1-218ENST00000540784 ZNF283Q8N7M2 679 aa13.32□□□□□ -0.28
DDB1-218ENST00000540784 OR10H4Q8NGA5 316 aa13.32□□□□□ -0.28
DDB1-218ENST00000540784 IGFBPL1Q8WX77 278 aa13.32□□□□□ -0.28
DDB1-218ENST00000540784 MBD6Q96DN6 1003 aa13.32□□□□□ -0.28
DDB1-218ENST00000540784 MARS2Q96GW9 593 aaKnown RBP13.32□□□□□ -0.28
DDB1-218ENST00000540784 DOK1Q99704 481 aa13.32□□□□□ -0.28
DDB1-218ENST00000540784 SYT3Q9BQG1 590 aa13.32□□□□□ -0.28
DDB1-218ENST00000540784 C1QTNF5Q9BXJ0 243 aa13.32□□□□□ -0.28
DDB1-218ENST00000540784 MROQ9BYG7 248 aa13.32□□□□□ -0.28
DDB1-218ENST00000540784 MRPL37Q9BZE1 423 aaKnown RBP13.32□□□□□ -0.28
DDB1-218ENST00000540784 OR2J1Q9GZK6 312 aa13.32□□□□□ -0.28
DDB1-218ENST00000540784 SP140LQ9H930 580 aa13.32□□□□□ -0.28
DDB1-218ENST00000540784 AMBNQ9NP70 447 aa13.32□□□□□ -0.28
DDB1-218ENST00000540784 BEX4Q9NWD9 120 aaPredicted RBP13.32□□□□□ -0.28
DDB1-218ENST00000540784 FBXO9Q9UK97 447 aaPredicted RBP13.32□□□□□ -0.28
DDB1-218ENST00000540784 COPS3Q9UNS2 423 aa13.32□□□□□ -0.28
DDB1-218ENST00000540784 PCDHGB1Q9Y5G3 927 aa13.32□□□□□ -0.28
DDB1-218ENST00000540784 N6AMT1Q9Y5N5 214 aa13.32□□□□□ -0.28
DDB1-218ENST00000540784 ABCA12Q86UK0 2595 aa13.32□□□□□ -0.28
DDB1-218ENST00000540784 LRBAP50851 2863 aa13.32□□□□□ -0.28
DDB1-218ENST00000540784 ROS1P08922 2347 aa13.31□□□□□ -0.28
DDB1-218ENST00000540784 ITPR2Q14571 2701 aa13.31□□□□□ -0.28
DDB1-218ENST00000540784 J3QW42 95 aa13.31□□□□□ -0.28
DDB1-218ENST00000540784 OVOL3O00110 214 aa13.31□□□□□ -0.28
DDB1-218ENST00000540784 ZNF254O75437 659 aa13.31□□□□□ -0.28
DDB1-218ENST00000540784 WBP4O75554 376 aaKnown RBP13.31□□□□□ -0.28
DDB1-218ENST00000540784 GNAO1P09471 354 aa13.31□□□□□ -0.28
DDB1-218ENST00000540784 DBTP11182 482 aaKnown RBP13.31□□□□□ -0.28
DDB1-218ENST00000540784 OTX1P32242 354 aaPredicted RBP13.31□□□□□ -0.28
DDB1-218ENST00000540784 VHLP40337 213 aa13.31□□□□□ -0.28
DDB1-218ENST00000540784 KLF3P57682 345 aaPredicted RBP13.31□□□□□ -0.28
DDB1-218ENST00000540784 CXCR4P61073 352 aa13.31□□□□□ -0.28
DDB1-218ENST00000540784 ROM1Q03395 351 aa13.31□□□□□ -0.28
DDB1-218ENST00000540784 MALLQ13021 153 aa13.31□□□□□ -0.28
DDB1-218ENST00000540784 CDK5R2Q13319 367 aa13.31□□□□□ -0.28
DDB1-218ENST00000540784 MSMPQ1L6U9 139 aa13.31□□□□□ -0.28
DDB1-218ENST00000540784 DEFB113Q30KQ7 82 aa13.31□□□□□ -0.28
DDB1-218ENST00000540784 KLHL22Q53GT1 634 aa13.31□□□□□ -0.28
DDB1-218ENST00000540784 C11orf71Q6IPW1 123 aa13.31□□□□□ -0.28
DDB1-218ENST00000540784 ZNF322Q6U7Q0 402 aaPredicted RBP13.31□□□□□ -0.28
DDB1-218ENST00000540784 LRRN1Q6UXK5 716 aa13.31□□□□□ -0.28
DDB1-218ENST00000540784 THAP5Q7Z6K1 395 aa13.31□□□□□ -0.28
DDB1-218ENST00000540784 KLF14Q8TD94 323 aaPredicted RBP13.31□□□□□ -0.28
DDB1-218ENST00000540784 APH1BQ8WW43 257 aa13.31□□□□□ -0.28
DDB1-218ENST00000540784 TRMT61AQ96FX7 289 aaKnown RBP13.31□□□□□ -0.28
DDB1-218ENST00000540784 TBX5Q99593 518 aa13.31□□□□□ -0.28
DDB1-218ENST00000540784 NIPAL2Q9H841 368 aa13.31□□□□□ -0.28
DDB1-218ENST00000540784 SLCO1C1Q9NYB5 712 aa13.31□□□□□ -0.28
DDB1-218ENST00000540784 GPR160Q9UJ42 338 aa13.31□□□□□ -0.28
DDB1-218ENST00000540784 EXOGQ9Y2C4 368 aaKnown RBP13.31□□□□□ -0.28
DDB1-218ENST00000540784 A0A1W2PPW3 197 aa13.3□□□□□ -0.28
DDB1-218ENST00000540784 A0A1W2PQL4 384 aaPredicted RBP13.3□□□□□ -0.28
DDB1-218ENST00000540784 H3BSA7 217 aa13.3□□□□□ -0.28
DDB1-218ENST00000540784 PSMD9O00233 223 aa13.3□□□□□ -0.28
DDB1-218ENST00000540784 CLPTM1O96005 669 aa13.3□□□□□ -0.28
DDB1-218ENST00000540784 HSPA13P48723 471 aa13.3□□□□□ -0.28
DDB1-218ENST00000540784 CX3CR1P49238 355 aa13.3□□□□□ -0.28
DDB1-218ENST00000540784 ZNF91Q05481 1191 aa13.3□□□□□ -0.28
DDB1-218ENST00000540784 EGR3Q06889 387 aa13.3□□□□□ -0.28
DDB1-218ENST00000540784 SMN1Q16637 294 aaKnown RBP13.3□□□□□ -0.28
DDB1-218ENST00000540784 MBNL2Q5VZF2 373 aaKnown RBP13.3□□□□□ -0.28
DDB1-218ENST00000540784 IZUMO2Q6UXV1 221 aa13.3□□□□□ -0.28
DDB1-218ENST00000540784 USP51Q70EK9 711 aa13.3□□□□□ -0.28
DDB1-218ENST00000540784 ZNF679Q8IYX0 411 aa13.3□□□□□ -0.28
DDB1-218ENST00000540784 CNIH3Q8TBE1 160 aa13.3□□□□□ -0.28
DDB1-218ENST00000540784 HAVCR1Q96D42 359 aa13.3□□□□□ -0.28
DDB1-218ENST00000540784 CMBLQ96DG6 245 aa13.3□□□□□ -0.28
DDB1-218ENST00000540784 LGALS12Q96DT0 336 aa13.3□□□□□ -0.28
DDB1-218ENST00000540784 OR8B4Q96RC9 309 aa13.3□□□□□ -0.28
DDB1-218ENST00000540784 CACNG6Q9BXT2 260 aa13.3□□□□□ -0.28
DDB1-218ENST00000540784 POFUT1Q9H488 388 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms