RNA–Protein interactions for RNA: ENST00000539047.1

VAMP1-207, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 4

Gene VAMP1, Length 565 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-207ENST00000539047 M0R135 149 aa13.47□□□□□ -0.25
VAMP1-207ENST00000539047 SYNGR3O43761 229 aa13.47□□□□□ -0.25
VAMP1-207ENST00000539047 HLA-HP01893 362 aa13.47□□□□□ -0.25
VAMP1-207ENST00000539047 MMP7P09237 267 aaPredicted RBP13.47□□□□□ -0.25
VAMP1-207ENST00000539047 APLNRP35414 380 aa13.47□□□□□ -0.25
VAMP1-207ENST00000539047 PRKXP51817 358 aa13.47□□□□□ -0.25
VAMP1-207ENST00000539047 RAB1AP62820 205 aa13.47□□□□□ -0.25
VAMP1-207ENST00000539047 PSG4Q00888 419 aa13.47□□□□□ -0.25
VAMP1-207ENST00000539047 WDR38Q5JTN6 314 aa13.47□□□□□ -0.25
VAMP1-207ENST00000539047 SFRP5Q5T4F7 317 aa13.47□□□□□ -0.25
VAMP1-207ENST00000539047 DRAM2Q6UX65 266 aa13.47□□□□□ -0.25
VAMP1-207ENST00000539047 COMMD2Q86X83 199 aa13.47□□□□□ -0.25
VAMP1-207ENST00000539047 CATSPERDQ86XM0 798 aa13.47□□□□□ -0.25
VAMP1-207ENST00000539047 GALNT11Q8NCW6 608 aa13.47□□□□□ -0.25
VAMP1-207ENST00000539047 STEAP2Q8NFT2 490 aa13.47□□□□□ -0.25
VAMP1-207ENST00000539047 ASB5Q8WWX0 329 aa13.47□□□□□ -0.25
VAMP1-207ENST00000539047 GHSRQ92847 366 aa13.47□□□□□ -0.25
VAMP1-207ENST00000539047 TMEM203Q969S6 136 aa13.47□□□□□ -0.25
VAMP1-207ENST00000539047 ZNF799Q96GE5 643 aa13.47□□□□□ -0.25
VAMP1-207ENST00000539047 PGAM5Q96HS1 289 aa13.47□□□□□ -0.25
VAMP1-207ENST00000539047 WNT5BQ9H1J7 359 aa13.47□□□□□ -0.25
VAMP1-207ENST00000539047 BRD7Q9NPI1 651 aa13.47□□□□□ -0.25
VAMP1-207ENST00000539047 ELOVL5Q9NYP7 299 aa13.47□□□□□ -0.25
VAMP1-207ENST00000539047 NCOA6Q14686 2063 aaPredicted RBP13.47□□□□□ -0.25
VAMP1-207ENST00000539047 TLN1Q9Y490 2541 aaKnown RBP13.47□□□□□ -0.25
VAMP1-207ENST00000539047 TRDV1A0A1B0GX56 115 aa13.46□□□□□ -0.25
VAMP1-207ENST00000539047 PATE4P0C8F1 98 aa13.46□□□□□ -0.25
VAMP1-207ENST00000539047 ZNF121P58317 390 aaPredicted RBP13.46□□□□□ -0.25
VAMP1-207ENST00000539047 MFGE8Q08431 387 aaPredicted RBP13.46□□□□□ -0.25
VAMP1-207ENST00000539047 MRPL49Q13405 166 aaKnown RBP13.46□□□□□ -0.25
VAMP1-207ENST00000539047 TMEM244Q5VVB8 128 aa13.46□□□□□ -0.25
VAMP1-207ENST00000539047 SLC16A12Q6ZSM3 486 aa13.46□□□□□ -0.25
VAMP1-207ENST00000539047 OR1J2Q8NGS2 313 aa13.46□□□□□ -0.25
VAMP1-207ENST00000539047 RPS4Y2Q8TD47 263 aa13.46□□□□□ -0.25
VAMP1-207ENST00000539047 GPR148Q8TDV2 347 aa13.46□□□□□ -0.25
VAMP1-207ENST00000539047 TSEN15Q8WW01 171 aaKnown RBP13.46□□□□□ -0.25
VAMP1-207ENST00000539047 C12orf43Q96C57 262 aaKnown RBP13.46□□□□□ -0.25
VAMP1-207ENST00000539047 BOD1Q96IK1 185 aa13.46□□□□□ -0.25
VAMP1-207ENST00000539047 DCLRE1CQ96SD1 692 aaKnown RBP13.46□□□□□ -0.25
VAMP1-207ENST00000539047 OR51E2Q9H255 320 aa13.46□□□□□ -0.25
VAMP1-207ENST00000539047 SLC17A5Q9NRA2 495 aa13.46□□□□□ -0.25
VAMP1-207ENST00000539047 FRRS1LQ9P0K9 344 aa13.46□□□□□ -0.25
VAMP1-207ENST00000539047 NUFIP1Q9UHK0 495 aaKnown RBP13.46□□□□□ -0.25
VAMP1-207ENST00000539047 SIRT4Q9Y6E7 314 aaPredicted RBP13.46□□□□□ -0.25
VAMP1-207ENST00000539047 A0A1B0GVI7 797 aa13.45□□□□□ -0.26
VAMP1-207ENST00000539047 ZNF879B4DU55 563 aa13.45□□□□□ -0.26
VAMP1-207ENST00000539047 H3BMQ9 156 aa13.45□□□□□ -0.26
VAMP1-207ENST00000539047 GABRPO00591 440 aa13.45□□□□□ -0.26
VAMP1-207ENST00000539047 TBX1O43435 398 aa13.45□□□□□ -0.26
VAMP1-207ENST00000539047 GATBO75879 557 aaKnown RBP13.45□□□□□ -0.26
VAMP1-207ENST00000539047 ARL6IP5O75915 188 aa13.45□□□□□ -0.26
VAMP1-207ENST00000539047 ZFPL1O95159 310 aa13.45□□□□□ -0.26
VAMP1-207ENST00000539047 CD2P06729 351 aa13.45□□□□□ -0.26
VAMP1-207ENST00000539047 PSMB1P20618 241 aaKnown RBP13.45□□□□□ -0.26
VAMP1-207ENST00000539047 NR4A1P22736 598 aa13.45□□□□□ -0.26
VAMP1-207ENST00000539047 MYL9P24844 172 aa13.45□□□□□ -0.26
VAMP1-207ENST00000539047 CHRNB4P30926 498 aa13.45□□□□□ -0.26
VAMP1-207ENST00000539047 NANOS3P60323 173 aaKnown RBP13.45□□□□□ -0.26
VAMP1-207ENST00000539047 LSM3P62310 102 aaKnown RBP13.45□□□□□ -0.26
VAMP1-207ENST00000539047 DOC2BQ14184 412 aa13.45□□□□□ -0.26
VAMP1-207ENST00000539047 TBC1D28Q2M2D7 210 aa13.45□□□□□ -0.26
VAMP1-207ENST00000539047 SLC25A35Q3KQZ1 300 aa13.45□□□□□ -0.26
VAMP1-207ENST00000539047 USP43Q70EL4 1123 aa13.45□□□□□ -0.26
VAMP1-207ENST00000539047 SSX8Q7RTT4 187 aa13.45□□□□□ -0.26
VAMP1-207ENST00000539047 OR52H1Q8NGJ2 320 aa13.45□□□□□ -0.26
VAMP1-207ENST00000539047 HSD17B8Q92506 261 aa13.45□□□□□ -0.26
VAMP1-207ENST00000539047 PHYHIPQ92561 330 aa13.45□□□□□ -0.26
VAMP1-207ENST00000539047 MUCL1Q96DR8 90 aa13.45□□□□□ -0.26
VAMP1-207ENST00000539047 PGLYRP3Q96LB9 341 aa13.45□□□□□ -0.26
VAMP1-207ENST00000539047 KCTD7Q96MP8 289 aa13.45□□□□□ -0.26
VAMP1-207ENST00000539047 PDCD1LG2Q9BQ51 273 aa13.45□□□□□ -0.26
VAMP1-207ENST00000539047 PBOV1Q9GZY1 135 aa13.45□□□□□ -0.26
VAMP1-207ENST00000539047 NAA50Q9GZZ1 169 aaKnown RBP13.45□□□□□ -0.26
VAMP1-207ENST00000539047 OR10A2Q9H208 303 aa13.45□□□□□ -0.26
VAMP1-207ENST00000539047 FAM206AQ9NX38 181 aa13.45□□□□□ -0.26
VAMP1-207ENST00000539047 N6AMT1Q9Y5N5 214 aa13.45□□□□□ -0.26
VAMP1-207ENST00000539047 ASH1LQ9NR48 2969 aaKnown RBP13.44□□□□□ -0.26
VAMP1-207ENST00000539047 CACNA1CQ13936 2221 aa13.44□□□□□ -0.26
VAMP1-207ENST00000539047 OR5H1A6NKK0 313 aa13.44□□□□□ -0.26
VAMP1-207ENST00000539047 OR4C45A6NMZ5 311 aa13.44□□□□□ -0.26
VAMP1-207ENST00000539047 A8MXE2 369 aa13.44□□□□□ -0.26
VAMP1-207ENST00000539047 SRSF10O75494 262 aaKnown RBP13.44□□□□□ -0.26
VAMP1-207ENST00000539047 ZNF12P17014 697 aa13.44□□□□□ -0.26
VAMP1-207ENST00000539047 ACHEP22303 614 aa13.44□□□□□ -0.26
VAMP1-207ENST00000539047 CRYGSP22914 178 aa13.44□□□□□ -0.26
VAMP1-207ENST00000539047 STOMP27105 288 aa13.44□□□□□ -0.26
VAMP1-207ENST00000539047 FGF9P31371 208 aaPredicted RBP13.44□□□□□ -0.26
VAMP1-207ENST00000539047 OTX1P32242 354 aaPredicted RBP13.44□□□□□ -0.26
VAMP1-207ENST00000539047 KIR3DL2P43630 455 aa13.44□□□□□ -0.26
VAMP1-207ENST00000539047 ASCL1P50553 236 aa13.44□□□□□ -0.26
VAMP1-207ENST00000539047 TUBA1BP68363 451 aa13.44□□□□□ -0.26
VAMP1-207ENST00000539047 FABP5Q01469 135 aa13.44□□□□□ -0.26
VAMP1-207ENST00000539047 TLE1Q04724 770 aa13.44□□□□□ -0.26
VAMP1-207ENST00000539047 FOXB2Q5VYV0 432 aa13.44□□□□□ -0.26
VAMP1-207ENST00000539047 CD200R1LQ6Q8B3 271 aa13.44□□□□□ -0.26
VAMP1-207ENST00000539047 ZNF474Q6S9Z5 364 aaPredicted RBP13.44□□□□□ -0.26
VAMP1-207ENST00000539047 FAM57BQ71RH2 274 aa13.44□□□□□ -0.26
VAMP1-207ENST00000539047 TUBA1AQ71U36 451 aa13.44□□□□□ -0.26
VAMP1-207ENST00000539047 MDP1Q86V88 176 aa13.44□□□□□ -0.26
VAMP1-207ENST00000539047 FJX1Q86VR8 437 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms