RNA–Protein interactions for RNA: ENST00000538136.1

MSH6-209, Transcript of mutS homolog 6, humanhuman

TSL 2 BASIC

Gene MSH6, Length 4,055 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-209ENST00000538136 MGRN1O60291 552 aa6.34□□□□□ -1.4
MSH6-209ENST00000538136 TOXO94900 526 aa6.34□□□□□ -1.4
MSH6-209ENST00000538136 BMP2P12643 396 aa6.34□□□□□ -1.4
MSH6-209ENST00000538136 ADH6P28332 368 aa6.34□□□□□ -1.4
MSH6-209ENST00000538136 MRPL19P49406 292 aaKnown RBP6.34□□□□□ -1.4
MSH6-209ENST00000538136 ART1P52961 327 aa6.34□□□□□ -1.4
MSH6-209ENST00000538136 P2RY14Q15391 338 aa6.34□□□□□ -1.4
MSH6-209ENST00000538136 C9orf152Q5JTZ5 239 aa6.34□□□□□ -1.4
MSH6-209ENST00000538136 C6orf141Q5SZD1 244 aa6.34□□□□□ -1.4
MSH6-209ENST00000538136 ST6GALNAC3Q8NDV1 305 aa6.34□□□□□ -1.4
MSH6-209ENST00000538136 SLC26A10Q8NG04 563 aa6.34□□□□□ -1.4
MSH6-209ENST00000538136 RNASE11Q8TAA1 199 aaKnown RBP6.34□□□□□ -1.4
MSH6-209ENST00000538136 TNFAIP8L1Q8WVP5 186 aa6.34□□□□□ -1.4
MSH6-209ENST00000538136 ST8SIA4Q92187 359 aa6.34□□□□□ -1.4
MSH6-209ENST00000538136 TMEM106AQ96A25 262 aa6.34□□□□□ -1.4
MSH6-209ENST00000538136 MAGIXQ9H6Y5 334 aa6.34□□□□□ -1.4
MSH6-209ENST00000538136 ISG20L2Q9H9L3 353 aaKnown RBP6.34□□□□□ -1.4
MSH6-209ENST00000538136 NTN4Q9HB63 628 aa6.34□□□□□ -1.4
MSH6-209ENST00000538136 TRIM36Q9NQ86 728 aa6.34□□□□□ -1.4
MSH6-209ENST00000538136 SSR3Q9UNL2 185 aa6.34□□□□□ -1.4
MSH6-209ENST00000538136 TMEM14AQ9Y6G1 99 aa6.34□□□□□ -1.4
MSH6-209ENST00000538136 EFCAB10A6NFE3 127 aa6.33□□□□□ -1.4
MSH6-209ENST00000538136 F5H5P2 479 aa6.33□□□□□ -1.4
MSH6-209ENST00000538136 C19orf84I3L1E1 186 aa6.33□□□□□ -1.4
MSH6-209ENST00000538136 SLC33A1O00400 549 aaPredicted RBP6.33□□□□□ -1.4
MSH6-209ENST00000538136 SPRY1O43609 319 aaPredicted RBP6.33□□□□□ -1.4
MSH6-209ENST00000538136 BGLAPP02818 100 aa6.33□□□□□ -1.4
MSH6-209ENST00000538136 ALPLP05186 524 aa6.33□□□□□ -1.4
MSH6-209ENST00000538136 HPNP05981 417 aa6.33□□□□□ -1.4
MSH6-209ENST00000538136 C8BP07358 591 aa6.33□□□□□ -1.4
MSH6-209ENST00000538136 CD36P16671 472 aa6.33□□□□□ -1.4
MSH6-209ENST00000538136 CBLBQ13191 982 aa6.33□□□□□ -1.4
MSH6-209ENST00000538136 XKRXQ6PP77 449 aa6.33□□□□□ -1.4
MSH6-209ENST00000538136 KDF1Q8NAX2 398 aaPredicted RBP6.33□□□□□ -1.4
MSH6-209ENST00000538136 OR5L1Q8NGL2 311 aa6.33□□□□□ -1.4
MSH6-209ENST00000538136 OR10AC1Q8NH08 325 aa6.33□□□□□ -1.4
MSH6-209ENST00000538136 OR5AK2Q8NH90 309 aa6.33□□□□□ -1.4
MSH6-209ENST00000538136 TMEM80Q96HE8 168 aa6.33□□□□□ -1.4
MSH6-209ENST00000538136 OR2M2Q96R28 347 aa6.33□□□□□ -1.4
MSH6-209ENST00000538136 SIGLEC11Q96RL6 698 aa6.33□□□□□ -1.4
MSH6-209ENST00000538136 AMELYQ99218 206 aa6.33□□□□□ -1.4
MSH6-209ENST00000538136 CCL19Q99731 98 aa6.33□□□□□ -1.4
MSH6-209ENST00000538136 OR2B2Q9GZK3 357 aa6.33□□□□□ -1.4
MSH6-209ENST00000538136 HDHD2Q9H0R4 259 aa6.33□□□□□ -1.4
MSH6-209ENST00000538136 MRPL39Q9NYK5 338 aaKnown RBP6.33□□□□□ -1.4
MSH6-209ENST00000538136 RNF115Q9Y4L5 304 aa6.33□□□□□ -1.4
MSH6-209ENST00000538136 hCG_2014768A0A024R1R8 64 aa6.33□□□□□ -1.4
MSH6-209ENST00000538136 TCRBV5S2A0A599 114 aa6.33□□□□□ -1.4
MSH6-209ENST00000538136 LINC01387J3KSC0 135 aa6.33□□□□□ -1.4
MSH6-209ENST00000538136 TRAF3IP2O43734 574 aaPredicted RBP6.33□□□□□ -1.4
MSH6-209ENST00000538136 KDM4BO94953 1096 aa6.33□□□□□ -1.4
MSH6-209ENST00000538136 HAAOP46952 286 aa6.33□□□□□ -1.4
MSH6-209ENST00000538136 PRKCDQ05655 676 aa6.33□□□□□ -1.4
MSH6-209ENST00000538136 NSUN5P2Q63ZY6 315 aa6.33□□□□□ -1.4
MSH6-209ENST00000538136 RPL13AP3Q6NVV1 102 aa6.33□□□□□ -1.4
MSH6-209ENST00000538136 KRT74Q7RTS7 529 aa6.33□□□□□ -1.4
MSH6-209ENST00000538136 GGNQ86UU5 652 aa6.33□□□□□ -1.4
MSH6-209ENST00000538136 MOGAT3Q86VF5 341 aa6.33□□□□□ -1.4
MSH6-209ENST00000538136 OR8H2Q8N162 312 aa6.33□□□□□ -1.4
MSH6-209ENST00000538136 C17orf78Q8N4C9 275 aa6.33□□□□□ -1.4
MSH6-209ENST00000538136 GALNT11Q8NCW6 608 aa6.33□□□□□ -1.4
MSH6-209ENST00000538136 SAP30LQ9HAJ7 183 aa6.33□□□□□ -1.4
MSH6-209ENST00000538136 SIAEQ9HAT2 523 aa6.33□□□□□ -1.4
MSH6-209ENST00000538136 TRAPPC4Q9Y296 219 aa6.33□□□□□ -1.4
MSH6-209ENST00000538136 RHBDD3Q9Y3P4 386 aa6.33□□□□□ -1.4
MSH6-209ENST00000538136 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.33□□□□□ -1.4
MSH6-209ENST00000538136 SMIM31A0A1B0GVY4 71 aa6.33□□□□□ -1.4
MSH6-209ENST00000538136 LRP5LA4QPB2 252 aa6.33□□□□□ -1.4
MSH6-209ENST00000538136 ANKRD33BA6NCL7 494 aa6.33□□□□□ -1.4
MSH6-209ENST00000538136 OR14I1A6ND48 311 aa6.33□□□□□ -1.4
MSH6-209ENST00000538136 A8MXE2 369 aa6.33□□□□□ -1.4
MSH6-209ENST00000538136 RAB27BO00194 218 aa6.33□□□□□ -1.4
MSH6-209ENST00000538136 CDIPTO14735 213 aa6.33□□□□□ -1.4
MSH6-209ENST00000538136 PHF1O43189 567 aaPredicted RBP6.33□□□□□ -1.4
MSH6-209ENST00000538136 PRODHO43272 600 aa6.33□□□□□ -1.4
MSH6-209ENST00000538136 CRTAPO75718 401 aaPredicted RBP6.33□□□□□ -1.4
MSH6-209ENST00000538136 MNDAP41218 407 aa6.33□□□□□ -1.4
MSH6-209ENST00000538136 KLF3P57682 345 aaPredicted RBP6.33□□□□□ -1.4
MSH6-209ENST00000538136 PPP1CBP62140 327 aa6.33□□□□□ -1.4
MSH6-209ENST00000538136 PSG4Q00888 419 aa6.33□□□□□ -1.4
MSH6-209ENST00000538136 RSU1Q15404 277 aa6.33□□□□□ -1.4
MSH6-209ENST00000538136 SPHARQ15513 63 aa6.33□□□□□ -1.4
MSH6-209ENST00000538136 LRP11Q86VZ4 500 aa6.33□□□□□ -1.4
MSH6-209ENST00000538136 GID4Q8IVV7 300 aa6.33□□□□□ -1.4
MSH6-209ENST00000538136 PNLDC1Q8NA58 520 aaKnown RBP6.33□□□□□ -1.4
MSH6-209ENST00000538136 OR1F12Q8NHA8 337 aa6.33□□□□□ -1.4
MSH6-209ENST00000538136 UFD1Q92890 307 aa6.33□□□□□ -1.4
MSH6-209ENST00000538136 MRPL15Q9P015 296 aaKnown RBP6.33□□□□□ -1.4
MSH6-209ENST00000538136 GPR160Q9UJ42 338 aa6.33□□□□□ -1.4
MSH6-209ENST00000538136 PPP1R3CQ9UQK1 317 aa6.33□□□□□ -1.4
MSH6-209ENST00000538136 HTR3EA5X5Y0 456 aa6.32□□□□□ -1.4
MSH6-209ENST00000538136 OR5H1A6NKK0 313 aa6.32□□□□□ -1.4
MSH6-209ENST00000538136 B4DXG7 233 aa6.32□□□□□ -1.4
MSH6-209ENST00000538136 NPIPB9F8W1W9 429 aa6.32□□□□□ -1.4
MSH6-209ENST00000538136 H3BNX3 289 aa6.32□□□□□ -1.4
MSH6-209ENST00000538136 ADAM10O14672 748 aa6.32□□□□□ -1.4
MSH6-209ENST00000538136 NCR1O76036 304 aa6.32□□□□□ -1.4
MSH6-209ENST00000538136 TFP02787 698 aa6.32□□□□□ -1.4
MSH6-209ENST00000538136 CECR9P0C854 216 aa6.32□□□□□ -1.4
MSH6-209ENST00000538136 GABRA5P31644 462 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms