RNA–Protein interactions for RNA: ENST00000535927.5

VAMP1-205, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 4

Gene VAMP1, Length 578 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-205ENST00000535927 CDH20Q9HBT6 801 aa14.1□□□□□ -0.15
VAMP1-205ENST00000535927 PAK1IP1Q9NWT1 392 aaPredicted RBP14.1□□□□□ -0.15
VAMP1-205ENST00000535927 BABAM2Q9NXR7 383 aa14.1□□□□□ -0.15
VAMP1-205ENST00000535927 KCNN3Q9UGI6 736 aa14.1□□□□□ -0.15
VAMP1-205ENST00000535927 ZNF503-AS2A6NEH8 195 aa14.09□□□□□ -0.15
VAMP1-205ENST00000535927 TRIM64CA6NLI5 447 aa14.09□□□□□ -0.15
VAMP1-205ENST00000535927 M0R135 149 aa14.09□□□□□ -0.15
VAMP1-205ENST00000535927 APOL3O95236 402 aa14.09□□□□□ -0.15
VAMP1-205ENST00000535927 ABHD16AO95870 558 aa14.09□□□□□ -0.15
VAMP1-205ENST00000535927 CD1AP06126 327 aa14.09□□□□□ -0.15
VAMP1-205ENST00000535927 THBDP07204 575 aa14.09□□□□□ -0.15
VAMP1-205ENST00000535927 ZNF35P13682 527 aa14.09□□□□□ -0.15
VAMP1-205ENST00000535927 RPS27P42677 84 aaKnown RBP14.09□□□□□ -0.15
VAMP1-205ENST00000535927 IDH3GP51553 393 aaPredicted RBP14.09□□□□□ -0.15
VAMP1-205ENST00000535927 CCR9P51686 369 aa14.09□□□□□ -0.15
VAMP1-205ENST00000535927 DBPQ10586 325 aaPredicted RBP14.09□□□□□ -0.15
VAMP1-205ENST00000535927 SPHARQ15513 63 aa14.09□□□□□ -0.15
VAMP1-205ENST00000535927 LIPNQ5VXI9 398 aa14.09□□□□□ -0.15
VAMP1-205ENST00000535927 TMEM154Q6P9G4 183 aa14.09□□□□□ -0.15
VAMP1-205ENST00000535927 COLCA1Q6ZS62 124 aa14.09□□□□□ -0.15
VAMP1-205ENST00000535927 ZNF584Q8IVC4 421 aa14.09□□□□□ -0.15
VAMP1-205ENST00000535927 HTRA1Q92743 480 aa14.09□□□□□ -0.15
VAMP1-205ENST00000535927 APOBEC3DQ96AK3 386 aaPredicted RBP14.09□□□□□ -0.15
VAMP1-205ENST00000535927 ZNF799Q96GE5 643 aa14.09□□□□□ -0.15
VAMP1-205ENST00000535927 TBX5Q99593 518 aa14.09□□□□□ -0.15
VAMP1-205ENST00000535927 BCL2L14Q9BZR8 327 aa14.09□□□□□ -0.15
VAMP1-205ENST00000535927 RGCCQ9H4X1 137 aa14.09□□□□□ -0.15
VAMP1-205ENST00000535927 TRIM36Q9NQ86 728 aa14.09□□□□□ -0.15
VAMP1-205ENST00000535927 SLCO1C1Q9NYB5 712 aa14.09□□□□□ -0.15
VAMP1-205ENST00000535927 MRM2Q9UI43 246 aaKnown RBP14.09□□□□□ -0.15
VAMP1-205ENST00000535927 KLHDC2Q9Y2U9 406 aa14.09□□□□□ -0.15
VAMP1-205ENST00000535927 LRP12Q9Y561 859 aa14.09□□□□□ -0.15
VAMP1-205ENST00000535927 ITPR2Q14571 2701 aa14.08□□□□□ -0.15
VAMP1-205ENST00000535927 IGHV1-18A0A0C4DH31 117 aa14.08□□□□□ -0.16
VAMP1-205ENST00000535927 H3BSA7 217 aa14.08□□□□□ -0.16
VAMP1-205ENST00000535927 ACSM4P0C7M7 580 aa14.08□□□□□ -0.16
VAMP1-205ENST00000535927 CECR9P0C854 216 aa14.08□□□□□ -0.16
VAMP1-205ENST00000535927 PSKH1P11801 424 aa14.08□□□□□ -0.16
VAMP1-205ENST00000535927 CFL1P23528 166 aaKnown RBP14.08□□□□□ -0.16
VAMP1-205ENST00000535927 CD40P25942 277 aa14.08□□□□□ -0.16
VAMP1-205ENST00000535927 APEX1P27695 318 aaKnown RBP14.08□□□□□ -0.16
VAMP1-205ENST00000535927 PSMA6P60900 246 aaKnown RBP14.08□□□□□ -0.16
VAMP1-205ENST00000535927 RPS23P62266 143 aaKnown RBP14.08□□□□□ -0.16
VAMP1-205ENST00000535927 TUBA1BP68363 451 aa14.08□□□□□ -0.16
VAMP1-205ENST00000535927 GALK2Q01415 458 aa14.08□□□□□ -0.16
VAMP1-205ENST00000535927 NAAAQ02083 359 aa14.08□□□□□ -0.16
VAMP1-205ENST00000535927 RSPO1Q2MKA7 263 aaPredicted RBP14.08□□□□□ -0.16
VAMP1-205ENST00000535927 NCMAPQ5T1S8 102 aa14.08□□□□□ -0.16
VAMP1-205ENST00000535927 RPL22L1Q6P5R6 122 aaKnown RBP14.08□□□□□ -0.16
VAMP1-205ENST00000535927 LRRN1Q6UXK5 716 aa14.08□□□□□ -0.16
VAMP1-205ENST00000535927 TUBA1AQ71U36 451 aa14.08□□□□□ -0.16
VAMP1-205ENST00000535927 WFDC8Q8IUA0 241 aa14.08□□□□□ -0.16
VAMP1-205ENST00000535927 SPARTQ8N0X7 666 aa14.08□□□□□ -0.16
VAMP1-205ENST00000535927 ZNF283Q8N7M2 679 aa14.08□□□□□ -0.16
VAMP1-205ENST00000535927 ZNF485Q8NCK3 441 aa14.08□□□□□ -0.16
VAMP1-205ENST00000535927 C4orf45Q96LM5 186 aa14.08□□□□□ -0.16
VAMP1-205ENST00000535927 AMELYQ99218 206 aa14.08□□□□□ -0.16
VAMP1-205ENST00000535927 DOK1Q99704 481 aa14.08□□□□□ -0.16
VAMP1-205ENST00000535927 RHNO1Q9BSD3 238 aa14.08□□□□□ -0.16
VAMP1-205ENST00000535927 C1QTNF5Q9BXJ0 243 aa14.08□□□□□ -0.16
VAMP1-205ENST00000535927 OPA3Q9H6K4 179 aa14.08□□□□□ -0.16
VAMP1-205ENST00000535927 NOX3Q9HBY0 568 aa14.08□□□□□ -0.16
VAMP1-205ENST00000535927 GNG8Q9UK08 70 aa14.08□□□□□ -0.16
VAMP1-205ENST00000535927 R4GMQ9 66 aa14.08□□□□□ -0.16
VAMP1-205ENST00000535927 PRR14LQ5THK1 2151 aa14.07□□□□□ -0.16
VAMP1-205ENST00000535927 LOC100509620A0A075B734 347 aa14.07□□□□□ -0.16
VAMP1-205ENST00000535927 TMEM269A0A1B0GVZ9 245 aa14.07□□□□□ -0.16
VAMP1-205ENST00000535927 A0A1W2PR80 420 aa14.07□□□□□ -0.16
VAMP1-205ENST00000535927 C5orf49A4QMS7 147 aa14.07□□□□□ -0.16
VAMP1-205ENST00000535927 F5H5K5 113 aa14.07□□□□□ -0.16
VAMP1-205ENST00000535927 J3QLW9 94 aa14.07□□□□□ -0.16
VAMP1-205ENST00000535927 M0R1B8 84 aa14.07□□□□□ -0.16
VAMP1-205ENST00000535927 MT-ND2P03891 347 aa14.07□□□□□ -0.16
VAMP1-205ENST00000535927 HTR1AP08908 422 aa14.07□□□□□ -0.16
VAMP1-205ENST00000535927 ZNF19P17023 458 aa14.07□□□□□ -0.16
VAMP1-205ENST00000535927 CD53P19397 219 aa14.07□□□□□ -0.16
VAMP1-205ENST00000535927 ZNF83P51522 516 aa14.07□□□□□ -0.16
VAMP1-205ENST00000535927 OR12D2P58182 307 aa14.07□□□□□ -0.16
VAMP1-205ENST00000535927 EMX1Q04741 257 aaPredicted RBP14.07□□□□□ -0.16
VAMP1-205ENST00000535927 SSX6Q7RTT6 188 aa14.07□□□□□ -0.16
VAMP1-205ENST00000535927 ZNF367Q7RTV3 350 aa14.07□□□□□ -0.16
VAMP1-205ENST00000535927 LINC01560Q8TB33 94 aa14.07□□□□□ -0.16
VAMP1-205ENST00000535927 C4orf36Q96KX1 117 aa14.07□□□□□ -0.16
VAMP1-205ENST00000535927 ACOT13Q9NPJ3 140 aa14.07□□□□□ -0.16
VAMP1-205ENST00000535927 IGHV2OR16-5A0A0B4J2B6 119 aa14.06□□□□□ -0.16
VAMP1-205ENST00000535927 A0A0U1RQV5 110 aa14.06□□□□□ -0.16
VAMP1-205ENST00000535927 PRSS44E7EML9 344 aa14.06□□□□□ -0.16
VAMP1-205ENST00000535927 OGG1O15527 345 aa14.06□□□□□ -0.16
VAMP1-205ENST00000535927 XRCC2O43543 280 aa14.06□□□□□ -0.16
VAMP1-205ENST00000535927 CD3EP07766 207 aa14.06□□□□□ -0.16
VAMP1-205ENST00000535927 ATP6V1B1P15313 513 aa14.06□□□□□ -0.16
VAMP1-205ENST00000535927 NR4A1P22736 598 aa14.06□□□□□ -0.16
VAMP1-205ENST00000535927 GRNP28799 593 aaKnown RBP14.06□□□□□ -0.16
VAMP1-205ENST00000535927 CX3CR1P49238 355 aa14.06□□□□□ -0.16
VAMP1-205ENST00000535927 UCP2P55851 309 aa14.06□□□□□ -0.16
VAMP1-205ENST00000535927 UBE2UQ5VVX9 321 aa14.06□□□□□ -0.16
VAMP1-205ENST00000535927 OTPQ5XKR4 325 aa14.06□□□□□ -0.16
VAMP1-205ENST00000535927 ZNF704Q6ZNC4 412 aaPredicted RBP14.06□□□□□ -0.16
VAMP1-205ENST00000535927 C22orf34Q6ZV56 151 aa14.06□□□□□ -0.16
VAMP1-205ENST00000535927 NUP37Q8NFH4 326 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms