RNA–Protein interactions for RNA: ENST00000534716.2

NDUFS3-213, Transcript of NADH:ubiquinone oxidoreductase core subunit S3, humanhuman

TSL 2 BASIC

Gene NDUFS3, Length 1,263 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS3-213ENST00000534716 NDE1Q9NXR1 346 aa15.84■□□□□ 0.13
NDUFS3-213ENST00000534716 PTTG3PQ9NZH4 202 aa15.84■□□□□ 0.13
NDUFS3-213ENST00000534716 CYB5R1Q9UHQ9 305 aa15.84■□□□□ 0.13
NDUFS3-213ENST00000534716 TMCC3Q9ULS5 477 aa15.84■□□□□ 0.13
NDUFS3-213ENST00000534716 OR6C68A6NDL8 312 aa15.83■□□□□ 0.12
NDUFS3-213ENST00000534716 TRIM77I1YAP6 450 aa15.83■□□□□ 0.12
NDUFS3-213ENST00000534716 KRT36O76013 467 aa15.83■□□□□ 0.12
NDUFS3-213ENST00000534716 SELEP16581 610 aa15.83■□□□□ 0.12
NDUFS3-213ENST00000534716 NOS3P29474 1203 aa15.83■□□□□ 0.12
NDUFS3-213ENST00000534716 MSX2P35548 267 aaPredicted RBP15.83■□□□□ 0.12
NDUFS3-213ENST00000534716 GGT2P36268 569 aa15.83■□□□□ 0.12
NDUFS3-213ENST00000534716 MDH2P40926 338 aaKnown RBP15.83■□□□□ 0.12
NDUFS3-213ENST00000534716 CENPAP49450 140 aa15.83■□□□□ 0.12
NDUFS3-213ENST00000534716 MMP16P51512 607 aa15.83■□□□□ 0.12
NDUFS3-213ENST00000534716 ZNF181Q2M3W8 571 aa15.83■□□□□ 0.12
NDUFS3-213ENST00000534716 PGBD2Q6P3X8 592 aa15.83■□□□□ 0.12
NDUFS3-213ENST00000534716 CFAP77Q6ZQR2 320 aa15.83■□□□□ 0.12
NDUFS3-213ENST00000534716 OR5AS1Q8N127 324 aa15.83■□□□□ 0.12
NDUFS3-213ENST00000534716 MUC20Q8N307 709 aaPredicted RBP15.83■□□□□ 0.12
NDUFS3-213ENST00000534716 ATG16L2Q8NAA4 619 aa15.83■□□□□ 0.12
NDUFS3-213ENST00000534716 DVL3Q92997 716 aaPredicted RBP15.83■□□□□ 0.12
NDUFS3-213ENST00000534716 POP5Q969H6 163 aaKnown RBP15.83■□□□□ 0.12
NDUFS3-213ENST00000534716 PNRC2Q9NPJ4 139 aaKnown RBP15.83■□□□□ 0.12
NDUFS3-213ENST00000534716 RPRD1BQ9NQG5 326 aaKnown RBP15.83■□□□□ 0.12
NDUFS3-213ENST00000534716 MMP26Q9NRE1 261 aa15.83■□□□□ 0.12
NDUFS3-213ENST00000534716 ARL8BQ9NVJ2 186 aa15.83■□□□□ 0.12
NDUFS3-213ENST00000534716 KCNG2Q9UJ96 466 aa15.83■□□□□ 0.12
NDUFS3-213ENST00000534716 ARL2BPQ9Y2Y0 163 aa15.83■□□□□ 0.12
NDUFS3-213ENST00000534716 TRAPPC2LH3BP13 241 aa15.82■□□□□ 0.12
NDUFS3-213ENST00000534716 MLNRO43193 412 aa15.82■□□□□ 0.12
NDUFS3-213ENST00000534716 ACSM4P0C7M7 580 aa15.82■□□□□ 0.12
NDUFS3-213ENST00000534716 ZNF12P17014 697 aa15.82■□□□□ 0.12
NDUFS3-213ENST00000534716 RBMXP38159 391 aaKnown RBP15.82■□□□□ 0.12
NDUFS3-213ENST00000534716 SRP9P49458 86 aaKnown RBP15.82■□□□□ 0.12
NDUFS3-213ENST00000534716 C16orf89Q6UX73 402 aa15.82■□□□□ 0.12
NDUFS3-213ENST00000534716 C12orf54Q6X4T0 127 aa15.82■□□□□ 0.12
NDUFS3-213ENST00000534716 ZNF771Q7L3S4 317 aaPredicted RBP15.82■□□□□ 0.12
NDUFS3-213ENST00000534716 ZDHHC21Q8IVQ6 265 aa15.82■□□□□ 0.12
NDUFS3-213ENST00000534716 LINC00471Q8N535 108 aa15.82■□□□□ 0.12
NDUFS3-213ENST00000534716 DDOQ99489 341 aa15.82■□□□□ 0.12
NDUFS3-213ENST00000534716 RBM4Q9BWF3 364 aaKnown RBP15.82■□□□□ 0.12
NDUFS3-213ENST00000534716 TRIM15Q9C019 465 aa15.82■□□□□ 0.12
NDUFS3-213ENST00000534716 TMEM89A2RUT3 159 aa15.81■□□□□ 0.12
NDUFS3-213ENST00000534716 BHLHE40O14503 412 aa15.81■□□□□ 0.12
NDUFS3-213ENST00000534716 DCTN3O75935 186 aa15.81■□□□□ 0.12
NDUFS3-213ENST00000534716 FPR2P25090 351 aa15.81■□□□□ 0.12
NDUFS3-213ENST00000534716 GATA4P43694 442 aa15.81■□□□□ 0.12
NDUFS3-213ENST00000534716 ZNF154Q13106 437 aa15.81■□□□□ 0.12
NDUFS3-213ENST00000534716 RPL13AP3Q6NVV1 102 aa15.81■□□□□ 0.12
NDUFS3-213ENST00000534716 ZSCAN2Q7Z7L9 614 aaPredicted RBP15.81■□□□□ 0.12
NDUFS3-213ENST00000534716 DEFB107AQ8IZN7 70 aa15.81■□□□□ 0.12
NDUFS3-213ENST00000534716 CELF2-AS1Q8N7Q2 184 aa15.81■□□□□ 0.12
NDUFS3-213ENST00000534716 SDR9C7Q8NEX9 313 aa15.81■□□□□ 0.12
NDUFS3-213ENST00000534716 OR10AD1Q8NGE0 317 aa15.81■□□□□ 0.12
NDUFS3-213ENST00000534716 OR2AJ1Q8NGZ0 328 aa15.81■□□□□ 0.12
NDUFS3-213ENST00000534716 PITX2Q99697 317 aa15.81■□□□□ 0.12
NDUFS3-213ENST00000534716 SLC6A7Q99884 636 aa15.81■□□□□ 0.12
NDUFS3-213ENST00000534716 ATF6BQ99941 703 aa15.81■□□□□ 0.12
NDUFS3-213ENST00000534716 CDADC1Q9BWV3 514 aa15.81■□□□□ 0.12
NDUFS3-213ENST00000534716 HCAR1Q9BXC0 346 aa15.81■□□□□ 0.12
NDUFS3-213ENST00000534716 NTN4Q9HB63 628 aa15.81■□□□□ 0.12
NDUFS3-213ENST00000534716 TMEM100Q9NV29 134 aa15.81■□□□□ 0.12
NDUFS3-213ENST00000534716 MRPL22Q9NWU5 206 aaKnown RBP15.81■□□□□ 0.12
NDUFS3-213ENST00000534716 IL20Q9NYY1 176 aa15.81■□□□□ 0.12
NDUFS3-213ENST00000534716 LRCH1Q9Y2L9 728 aa15.81■□□□□ 0.12
NDUFS3-213ENST00000534716 INSIG2Q9Y5U4 225 aa15.81■□□□□ 0.12
NDUFS3-213ENST00000534716 LYVE1Q9Y5Y7 322 aa15.81■□□□□ 0.12
NDUFS3-213ENST00000534716 CDH10Q9Y6N8 788 aa15.81■□□□□ 0.12
NDUFS3-213ENST00000534716 H0YL77 283 aa15.8■□□□□ 0.12
NDUFS3-213ENST00000534716 RGS9O75916 674 aaPredicted RBP15.8■□□□□ 0.12
NDUFS3-213ENST00000534716 WNT2P09544 360 aa15.8■□□□□ 0.12
NDUFS3-213ENST00000534716 CFPP27918 469 aa15.8■□□□□ 0.12
NDUFS3-213ENST00000534716 MAGEA2P43356 314 aa15.8■□□□□ 0.12
NDUFS3-213ENST00000534716 SEC61A1P61619 476 aaKnown RBP15.8■□□□□ 0.12
NDUFS3-213ENST00000534716 KHDRBS1Q07666 443 aaKnown RBP eCLIP15.8■□□□□ 0.12
NDUFS3-213ENST00000534716 DBPQ10586 325 aaPredicted RBP15.8■□□□□ 0.12
NDUFS3-213ENST00000534716 TRAP1Q12931 704 aaKnown RBP15.8■□□□□ 0.12
NDUFS3-213ENST00000534716 GK2Q14410 553 aaPredicted RBP15.8■□□□□ 0.12
NDUFS3-213ENST00000534716 ZNF362Q5T0B9 420 aaPredicted RBP15.8■□□□□ 0.12
NDUFS3-213ENST00000534716 ZNF770Q6IQ21 691 aaPredicted RBP15.8■□□□□ 0.12
NDUFS3-213ENST00000534716 LINC00346Q8IVM7 164 aa15.8■□□□□ 0.12
NDUFS3-213ENST00000534716 BPIFB2Q8N4F0 458 aa15.8■□□□□ 0.12
NDUFS3-213ENST00000534716 OR52E2Q8NGJ4 325 aa15.8■□□□□ 0.12
NDUFS3-213ENST00000534716 TMEM165Q9HC07 324 aa15.8■□□□□ 0.12
NDUFS3-213ENST00000534716 ESM1Q9NQ30 184 aa15.8■□□□□ 0.12
NDUFS3-213ENST00000534716 ACTR3BQ9P1U1 418 aa15.8■□□□□ 0.12
NDUFS3-213ENST00000534716 DYSFO75923 2080 aa15.79■□□□□ 0.12
NDUFS3-213ENST00000534716 CEACAM18A8MTB9 384 aa15.79■□□□□ 0.12
NDUFS3-213ENST00000534716 F5H5K5 113 aa15.79■□□□□ 0.12
NDUFS3-213ENST00000534716 PPIAL4GP0DN37 164 aa15.79■□□□□ 0.12
NDUFS3-213ENST00000534716 MNAT1P51948 309 aa15.79■□□□□ 0.12
NDUFS3-213ENST00000534716 PAX2Q02962 417 aa15.79■□□□□ 0.12
NDUFS3-213ENST00000534716 MALLQ13021 153 aa15.79■□□□□ 0.12
NDUFS3-213ENST00000534716 ESCO2Q56NI9 601 aa15.79■□□□□ 0.12
NDUFS3-213ENST00000534716 SLC35F1Q5T1Q4 408 aa15.79■□□□□ 0.12
NDUFS3-213ENST00000534716 ZDHHC22Q8N966 263 aa15.79■□□□□ 0.12
NDUFS3-213ENST00000534716 OR52L1Q8NGH7 329 aa15.79■□□□□ 0.12
NDUFS3-213ENST00000534716 OR4C15Q8NGM1 316 aa15.79■□□□□ 0.12
NDUFS3-213ENST00000534716 ERGIC1Q969X5 290 aa15.79■□□□□ 0.12
NDUFS3-213ENST00000534716 MAP6Q96JE9 813 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms