RNA–Protein interactions for RNA: ENST00000533931.1

CTTN-215, Transcript of cortactin, humanhuman

TSL 3

Gene CTTN, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-215ENST00000533931 ZNF611Q8N823 705 aa13.45□□□□□ -0.26
CTTN-215ENST00000533931 OR5L1Q8NGL2 311 aa13.45□□□□□ -0.26
CTTN-215ENST00000533931 LILRB1Q8NHL6 650 aaPredicted RBP13.45□□□□□ -0.26
CTTN-215ENST00000533931 CNBD2Q96M20 576 aa13.45□□□□□ -0.26
CTTN-215ENST00000533931 DOK1Q99704 481 aa13.45□□□□□ -0.26
CTTN-215ENST00000533931 DHRS9Q9BPW9 319 aa13.45□□□□□ -0.26
CTTN-215ENST00000533931 MOB1AQ9H8S9 216 aa13.45□□□□□ -0.26
CTTN-215ENST00000533931 CA10Q9NS85 328 aa13.45□□□□□ -0.26
CTTN-215ENST00000533931 FAIMQ9NVQ4 179 aa13.45□□□□□ -0.26
CTTN-215ENST00000533931 BLOC1S6Q9UL45 172 aa13.45□□□□□ -0.26
CTTN-215ENST00000533931 TPRKBQ9Y3C4 175 aa13.45□□□□□ -0.26
CTTN-215ENST00000533931 LRRC42Q9Y546 428 aa13.45□□□□□ -0.26
CTTN-215ENST00000533931 LRP12Q9Y561 859 aa13.45□□□□□ -0.26
CTTN-215ENST00000533931 ATP23Q9Y6H3 246 aa13.45□□□□□ -0.26
CTTN-215ENST00000533931 DCHS2Q6V1P9 2916 aa13.45□□□□□ -0.26
CTTN-215ENST00000533931 DAPL1A0PJW8 107 aa13.44□□□□□ -0.26
CTTN-215ENST00000533931 F5H5K5 113 aa13.44□□□□□ -0.26
CTTN-215ENST00000533931 FAM20BO75063 409 aa13.44□□□□□ -0.26
CTTN-215ENST00000533931 APOL3O95236 402 aa13.44□□□□□ -0.26
CTTN-215ENST00000533931 DBHP09172 617 aa13.44□□□□□ -0.26
CTTN-215ENST00000533931 TACSTD2P09758 323 aa13.44□□□□□ -0.26
CTTN-215ENST00000533931 CCL2P13500 99 aa13.44□□□□□ -0.26
CTTN-215ENST00000533931 CCNOP22674 350 aa13.44□□□□□ -0.26
CTTN-215ENST00000533931 EVX1P49640 407 aa13.44□□□□□ -0.26
CTTN-215ENST00000533931 MMP16P51512 607 aa13.44□□□□□ -0.26
CTTN-215ENST00000533931 RIDAP52758 137 aaKnown RBP13.44□□□□□ -0.26
CTTN-215ENST00000533931 HCCSP53701 268 aa13.44□□□□□ -0.26
CTTN-215ENST00000533931 ZNF85Q03923 595 aa13.44□□□□□ -0.26
CTTN-215ENST00000533931 GALEQ14376 348 aa13.44□□□□□ -0.26
CTTN-215ENST00000533931 ZNF829Q3KNS6 432 aaPredicted RBP13.44□□□□□ -0.26
CTTN-215ENST00000533931 RNLSQ5VYX0 342 aa13.44□□□□□ -0.26
CTTN-215ENST00000533931 LRRN1Q6UXK5 716 aa13.44□□□□□ -0.26
CTTN-215ENST00000533931 ZNF101Q8IZC7 436 aa13.44□□□□□ -0.26
CTTN-215ENST00000533931 BPIFB6Q8NFQ5 453 aa13.44□□□□□ -0.26
CTTN-215ENST00000533931 OR52H1Q8NGJ2 320 aa13.44□□□□□ -0.26
CTTN-215ENST00000533931 SMAP2Q8WU79 429 aaPredicted RBP13.44□□□□□ -0.26
CTTN-215ENST00000533931 TMEM171Q8WVE6 324 aa13.44□□□□□ -0.26
CTTN-215ENST00000533931 AKAP1Q92667 903 aaKnown RBP eCLIP13.44□□□□□ -0.26
CTTN-215ENST00000533931 FBXW5Q969U6 566 aa13.44□□□□□ -0.26
CTTN-215ENST00000533931 TMEM80Q96HE8 168 aa13.44□□□□□ -0.26
CTTN-215ENST00000533931 YTHDF1Q9BYJ9 559 aaKnown RBP13.44□□□□□ -0.26
CTTN-215ENST00000533931 OPA3Q9H6K4 179 aa13.44□□□□□ -0.26
CTTN-215ENST00000533931 PLEKHF2Q9H8W4 249 aa13.44□□□□□ -0.26
CTTN-215ENST00000533931 ERVK13-1Q9NX77 482 aa13.44□□□□□ -0.26
CTTN-215ENST00000533931 SLCO1C1Q9NYB5 712 aa13.44□□□□□ -0.26
CTTN-215ENST00000533931 CISD1Q9NZ45 108 aaKnown RBP13.44□□□□□ -0.26
CTTN-215ENST00000533931 ZNF391Q9UJN7 358 aa13.44□□□□□ -0.26
CTTN-215ENST00000533931 EDARQ9UNE0 448 aa13.44□□□□□ -0.26
CTTN-215ENST00000533931 EXOSC1Q9Y3B2 195 aaKnown RBP13.44□□□□□ -0.26
CTTN-215ENST00000533931 CELSR2Q9HCU4 2923 aa13.43□□□□□ -0.26
CTTN-215ENST00000533931 A0A1W2PPR1 153 aa13.43□□□□□ -0.26
CTTN-215ENST00000533931 METTL15A6NJ78 407 aa13.43□□□□□ -0.26
CTTN-215ENST00000533931 E7EQL1 145 aa13.43□□□□□ -0.26
CTTN-215ENST00000533931 PLAUP00749 431 aa13.43□□□□□ -0.26
CTTN-215ENST00000533931 MYL12AP19105 171 aa13.43□□□□□ -0.26
CTTN-215ENST00000533931 APOBEC3AP31941 199 aaPredicted RBP13.43□□□□□ -0.26
CTTN-215ENST00000533931 CX3CR1P49238 355 aa13.43□□□□□ -0.26
CTTN-215ENST00000533931 EFNB3Q15768 340 aa13.43□□□□□ -0.26
CTTN-215ENST00000533931 RFPL4BQ6ZWI9 263 aa13.43□□□□□ -0.26
CTTN-215ENST00000533931 PRSS45Q7RTY3 260 aa13.43□□□□□ -0.26
CTTN-215ENST00000533931 FAM220AQ7Z4H9 259 aa13.43□□□□□ -0.26
CTTN-215ENST00000533931 RFLNBQ8N5W9 214 aa13.43□□□□□ -0.26
CTTN-215ENST00000533931 ABHD4Q8TB40 342 aa13.43□□□□□ -0.26
CTTN-215ENST00000533931 SNX33Q8WV41 574 aa13.43□□□□□ -0.26
CTTN-215ENST00000533931 SLC7A6Q92536 515 aa13.43□□□□□ -0.26
CTTN-215ENST00000533931 GGHQ92820 318 aa13.43□□□□□ -0.26
CTTN-215ENST00000533931 MYDGFQ969H8 173 aa13.43□□□□□ -0.26
CTTN-215ENST00000533931 RGCCQ9H4X1 137 aa13.43□□□□□ -0.26
CTTN-215ENST00000533931 DUSP21Q9H596 190 aa13.43□□□□□ -0.26
CTTN-215ENST00000533931 MRM2Q9UI43 246 aaKnown RBP13.43□□□□□ -0.26
CTTN-215ENST00000533931 IKZF2Q9UKS7 526 aa13.43□□□□□ -0.26
CTTN-215ENST00000533931 MYRFQ9Y2G1 1151 aa13.43□□□□□ -0.26
CTTN-215ENST00000533931 GRIP1Q9Y3R0 1128 aa13.43□□□□□ -0.26
CTTN-215ENST00000533931 CMAHPQ9Y471 501 aa13.43□□□□□ -0.26
CTTN-215ENST00000533931 HRNRQ86YZ3 2850 aaPredicted RBP13.43□□□□□ -0.26
CTTN-215ENST00000533931 PKDREJQ9NTG1 2253 aa13.43□□□□□ -0.26
CTTN-215ENST00000533931 CRYBG3Q68DQ2 2970 aa13.42□□□□□ -0.26
CTTN-215ENST00000533931 PRR32B1ATL7 298 aa13.42□□□□□ -0.26
CTTN-215ENST00000533931 XPNPEP2O43895 674 aa13.42□□□□□ -0.26
CTTN-215ENST00000533931 MRPS14O60783 128 aaKnown RBP13.42□□□□□ -0.26
CTTN-215ENST00000533931 ZNF250P15622 560 aa13.42□□□□□ -0.26
CTTN-215ENST00000533931 CFL1P23528 166 aaKnown RBP13.42□□□□□ -0.26
CTTN-215ENST00000533931 CRHBPP24387 322 aa13.42□□□□□ -0.26
CTTN-215ENST00000533931 SLC6A9P48067 706 aa13.42□□□□□ -0.26
CTTN-215ENST00000533931 PPP1CBP62140 327 aa13.42□□□□□ -0.26
CTTN-215ENST00000533931 SLC35A2P78381 396 aa13.42□□□□□ -0.26
CTTN-215ENST00000533931 ST3GAL4Q11206 333 aa13.42□□□□□ -0.26
CTTN-215ENST00000533931 MALLQ13021 153 aa13.42□□□□□ -0.26
CTTN-215ENST00000533931 MBNL2Q5VZF2 373 aaKnown RBP13.42□□□□□ -0.26
CTTN-215ENST00000533931 RGS7BPQ6MZT1 257 aaPredicted RBP13.42□□□□□ -0.26
CTTN-215ENST00000533931 SSX6Q7RTT6 188 aa13.42□□□□□ -0.26
CTTN-215ENST00000533931 DTX2Q86UW9 622 aa13.42□□□□□ -0.26
CTTN-215ENST00000533931 ZNF283Q8N7M2 679 aa13.42□□□□□ -0.26
CTTN-215ENST00000533931 ZNF540Q8NDQ6 660 aa13.42□□□□□ -0.26
CTTN-215ENST00000533931 OR1J1Q8NGS3 322 aa13.42□□□□□ -0.26
CTTN-215ENST00000533931 MRPL24Q96A35 216 aaKnown RBP13.42□□□□□ -0.26
CTTN-215ENST00000533931 TBX5Q99593 518 aa13.42□□□□□ -0.26
CTTN-215ENST00000533931 ZNF649Q9BS31 505 aa13.42□□□□□ -0.26
CTTN-215ENST00000533931 ALG8Q9BVK2 526 aa13.42□□□□□ -0.26
CTTN-215ENST00000533931 CHCHD3Q9NX63 227 aaKnown RBP13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms