RNA–Protein interactions for RNA: ENST00000533242.1

NEDD8-207, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 1 (best)

Gene NEDD8, Length 2,300 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-207ENST00000533242 KTI12Q96EK9 354 aaPredicted RBP7.24□□□□□ -1.25
NEDD8-207ENST00000533242 LCORQ96JN0 433 aaPredicted RBP7.24□□□□□ -1.25
NEDD8-207ENST00000533242 TMEM246Q9BRR3 403 aa7.24□□□□□ -1.25
NEDD8-207ENST00000533242 RPRD1BQ9NQG5 326 aaKnown RBP7.24□□□□□ -1.25
NEDD8-207ENST00000533242 BAIAP2Q9UQB8 552 aa7.24□□□□□ -1.25
NEDD8-207ENST00000533242 TRBV2A0A0J9YWF9 115 aa7.24□□□□□ -1.25
NEDD8-207ENST00000533242 OR6C70A6NIJ9 312 aa7.24□□□□□ -1.25
NEDD8-207ENST00000533242 F12P00748 615 aaPredicted RBP7.24□□□□□ -1.25
NEDD8-207ENST00000533242 IFNGP01579 166 aa7.24□□□□□ -1.25
NEDD8-207ENST00000533242 GUSBP08236 651 aa7.24□□□□□ -1.25
NEDD8-207ENST00000533242 OR2T7P0C7T2 308 aa7.24□□□□□ -1.25
NEDD8-207ENST00000533242 PTBP1P26599 531 aaKnown RBP eCLIP7.24□□□□□ -1.257e-6■□□□□ 9.8
NEDD8-207ENST00000533242 HLA-DMAP28067 261 aa7.24□□□□□ -1.25
NEDD8-207ENST00000533242 PITPNBP48739 271 aa7.24□□□□□ -1.25
NEDD8-207ENST00000533242 ACTC1P68032 377 aa7.24□□□□□ -1.25
NEDD8-207ENST00000533242 ACTA1P68133 377 aa7.24□□□□□ -1.25
NEDD8-207ENST00000533242 PLCXD2Q0VAA5 305 aa7.24□□□□□ -1.25
NEDD8-207ENST00000533242 TOMM34Q15785 309 aaPredicted RBP7.24□□□□□ -1.25
NEDD8-207ENST00000533242 CPEB4Q17RY0 729 aaKnown RBP eCLIP7.24□□□□□ -1.25
NEDD8-207ENST00000533242 DPY19L2P2Q6ZN68 376 aa7.24□□□□□ -1.25
NEDD8-207ENST00000533242 ZNF704Q6ZNC4 412 aaPredicted RBP7.24□□□□□ -1.25
NEDD8-207ENST00000533242 ZNF611Q8N823 705 aa7.24□□□□□ -1.25
NEDD8-207ENST00000533242 LRRC75AQ8NAA5 344 aa7.24□□□□□ -1.25
NEDD8-207ENST00000533242 OR2T27Q8NH04 317 aa7.24□□□□□ -1.25
NEDD8-207ENST00000533242 PHOSPHO1Q8TCT1 267 aa7.24□□□□□ -1.25
NEDD8-207ENST00000533242 SNX33Q8WV41 574 aa7.24□□□□□ -1.25
NEDD8-207ENST00000533242 PIGQQ9BRB3 760 aa7.24□□□□□ -1.25
NEDD8-207ENST00000533242 ABCG5Q9H222 651 aa7.24□□□□□ -1.25
NEDD8-207ENST00000533242 DKKL1Q9UK85 242 aa7.24□□□□□ -1.25
NEDD8-207ENST00000533242 NOX1Q9Y5S8 564 aa7.24□□□□□ -1.25
NEDD8-207ENST00000533242 COL6A5A8TX70 2615 aa7.24□□□□□ -1.25
NEDD8-207ENST00000533242 FRG2CA6NGY1 282 aa7.23□□□□□ -1.25
NEDD8-207ENST00000533242 H3BSH0 61 aa7.23□□□□□ -1.25
NEDD8-207ENST00000533242 HS3ST1O14792 307 aa7.23□□□□□ -1.25
NEDD8-207ENST00000533242 ARPC3O15145 178 aa7.23□□□□□ -1.25
NEDD8-207ENST00000533242 TO15178 435 aa7.23□□□□□ -1.25
NEDD8-207ENST00000533242 CD5LO43866 347 aa7.23□□□□□ -1.25
NEDD8-207ENST00000533242 ZFPL1O95159 310 aa7.23□□□□□ -1.25
NEDD8-207ENST00000533242 UCHL1P09936 223 aa7.23□□□□□ -1.25
NEDD8-207ENST00000533242 EDNRAP25101 427 aa7.23□□□□□ -1.25
NEDD8-207ENST00000533242 CLDN12P56749 244 aa7.23□□□□□ -1.25
NEDD8-207ENST00000533242 B3GALT5-AS1P59052 145 aa7.23□□□□□ -1.25
NEDD8-207ENST00000533242 TAS2R43P59537 309 aa7.23□□□□□ -1.25
NEDD8-207ENST00000533242 PON3Q15166 354 aa7.23□□□□□ -1.25
NEDD8-207ENST00000533242 ETFDHQ16134 617 aa7.23□□□□□ -1.25
NEDD8-207ENST00000533242 ZNF74Q16587 644 aa7.23□□□□□ -1.25
NEDD8-207ENST00000533242 CLEC12BQ2HXU8 276 aa7.23□□□□□ -1.25
NEDD8-207ENST00000533242 ZNF684Q5T5D7 378 aa7.23□□□□□ -1.25
NEDD8-207ENST00000533242 LEG1Q6P5S2 330 aa7.23□□□□□ -1.25
NEDD8-207ENST00000533242 KRT74Q7RTS7 529 aa7.23□□□□□ -1.25
NEDD8-207ENST00000533242 HAVCR2Q8TDQ0 301 aa7.23□□□□□ -1.25
NEDD8-207ENST00000533242 YIPF5Q969M3 257 aa7.23□□□□□ -1.25
NEDD8-207ENST00000533242 RFT1Q96AA3 541 aa7.23□□□□□ -1.25
NEDD8-207ENST00000533242 ADOQ96SZ5 270 aa7.23□□□□□ -1.25
NEDD8-207ENST00000533242 AUNIPQ9H7T9 357 aa7.23□□□□□ -1.25
NEDD8-207ENST00000533242 NOX4Q9NPH5 578 aa7.23□□□□□ -1.25
NEDD8-207ENST00000533242 ING1Q9UK53 422 aaPredicted RBP7.23□□□□□ -1.25
NEDD8-207ENST00000533242 PROCRQ9UNN8 238 aa7.23□□□□□ -1.25
NEDD8-207ENST00000533242 MRPS7Q9Y2R9 242 aaKnown RBP7.23□□□□□ -1.25
NEDD8-207ENST00000533242 ZNF337Q9Y3M9 751 aa7.23□□□□□ -1.25
NEDD8-207ENST00000533242 ZNF175Q9Y473 711 aa7.23□□□□□ -1.25
NEDD8-207ENST00000533242 FBN1P35555 2871 aaKnown RBP7.23□□□□□ -1.25
NEDD8-207ENST00000533242 TRAV6A0A075B6T7 132 aa7.23□□□□□ -1.25
NEDD8-207ENST00000533242 A0A0A6YYJ9 748 aa7.23□□□□□ -1.25
NEDD8-207ENST00000533242 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP7.23□□□□□ -1.25
NEDD8-207ENST00000533242 TMEM72A0PK05 275 aa7.23□□□□□ -1.25
NEDD8-207ENST00000533242 RNF223E7ERA6 249 aa7.23□□□□□ -1.25
NEDD8-207ENST00000533242 INMT-MINDY4F8WBC2 141 aa7.23□□□□□ -1.25
NEDD8-207ENST00000533242 AKR7A2O43488 359 aa7.23□□□□□ -1.25
NEDD8-207ENST00000533242 UTS2O95399 124 aa7.23□□□□□ -1.25
NEDD8-207ENST00000533242 THBDP07204 575 aa7.23□□□□□ -1.25
NEDD8-207ENST00000533242 OR8G3PP0DMU2 310 aa7.23□□□□□ -1.25
NEDD8-207ENST00000533242 PTHLHP12272 177 aa7.23□□□□□ -1.25
NEDD8-207ENST00000533242 AHCYP23526 432 aa7.23□□□□□ -1.25
NEDD8-207ENST00000533242 PPICP45877 212 aa7.23□□□□□ -1.25
NEDD8-207ENST00000533242 POU4F2Q12837 409 aa7.23□□□□□ -1.25
NEDD8-207ENST00000533242 YIF1BQ5BJH7 314 aa7.23□□□□□ -1.25
NEDD8-207ENST00000533242 BCL2L15Q5TBC7 163 aa7.23□□□□□ -1.25
NEDD8-207ENST00000533242 MZT2BQ6NZ67 158 aa7.23□□□□□ -1.25
NEDD8-207ENST00000533242 TPRA1Q86W33 373 aa7.23□□□□□ -1.25
NEDD8-207ENST00000533242 SYS1Q8N2H4 156 aa7.23□□□□□ -1.25
NEDD8-207ENST00000533242 ASCC1Q8N9N2 400 aaKnown RBP7.23□□□□□ -1.25
NEDD8-207ENST00000533242 ZNF610Q8N9Z0 462 aa7.23□□□□□ -1.25
NEDD8-207ENST00000533242 LGALS14Q8TCE9 139 aa7.23□□□□□ -1.25
NEDD8-207ENST00000533242 KCTD12Q96CX2 325 aaKnown RBP7.23□□□□□ -1.25
NEDD8-207ENST00000533242 TMEM204Q9BSN7 226 aa7.23□□□□□ -1.25
NEDD8-207ENST00000533242 ALG12Q9BV10 488 aa7.23□□□□□ -1.25
NEDD8-207ENST00000533242 REG4Q9BYZ8 158 aa7.23□□□□□ -1.25
NEDD8-207ENST00000533242 BRD7Q9NPI1 651 aa7.23□□□□□ -1.25
NEDD8-207ENST00000533242 YAE1D1Q9NRH1 226 aa7.23□□□□□ -1.25
NEDD8-207ENST00000533242 PRODH2Q9UF12 536 aa7.23□□□□□ -1.25
NEDD8-207ENST00000533242 FBXL2Q9UKC9 423 aa7.23□□□□□ -1.25
NEDD8-207ENST00000533242 ADAM30Q9UKF2 790 aa7.23□□□□□ -1.25
NEDD8-207ENST00000533242 TRAV1-2A0A0B4J238 106 aa7.22□□□□□ -1.25
NEDD8-207ENST00000533242 FAM172BPA6NC97 362 aa7.22□□□□□ -1.25
NEDD8-207ENST00000533242 TVP23AA6NH52 213 aa7.22□□□□□ -1.25
NEDD8-207ENST00000533242 ELOA3DA6NLF2 546 aaPredicted RBP7.22□□□□□ -1.25
NEDD8-207ENST00000533242 NOTOA8MTQ0 251 aa7.22□□□□□ -1.25
NEDD8-207ENST00000533242 ZIC3O60481 467 aa7.22□□□□□ -1.25
NEDD8-207ENST00000533242 SLC43A1O75387 559 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms