RNA–Protein interactions for RNA: ENST00000531466.1

PTPRK-220, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 311 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-220ENST00000531466 OR5B12Q96R08 314 aa2.71□□□□□ -1.98
PTPRK-220ENST00000531466 SERPINI1Q99574 410 aa2.71□□□□□ -1.98
PTPRK-220ENST00000531466 MICU1Q9BPX6 476 aa2.71□□□□□ -1.98
PTPRK-220ENST00000531466 TMEM109Q9BVC6 243 aa2.71□□□□□ -1.98
PTPRK-220ENST00000531466 MAP1LC3CQ9BXW4 147 aa2.71□□□□□ -1.98
PTPRK-220ENST00000531466 C5orf66Q9H5L9 145 aa2.71□□□□□ -1.98
PTPRK-220ENST00000531466 POLE4Q9NR33 117 aa2.71□□□□□ -1.98
PTPRK-220ENST00000531466 SIRT7Q9NRC8 400 aa2.71□□□□□ -1.98
PTPRK-220ENST00000531466 P2RX2Q9UBL9 471 aa2.71□□□□□ -1.98
PTPRK-220ENST00000531466 GLS2Q9UI32 602 aa2.71□□□□□ -1.98
PTPRK-220ENST00000531466 RWDD2AQ9UIY3 292 aa2.71□□□□□ -1.98
PTPRK-220ENST00000531466 KLHL21Q9UJP4 597 aa2.71□□□□□ -1.98
PTPRK-220ENST00000531466 ZNF225Q9UK10 706 aa2.71□□□□□ -1.98
PTPRK-220ENST00000531466 NXT1Q9UKK6 140 aaKnown RBP2.71□□□□□ -1.98
PTPRK-220ENST00000531466 FBXL3Q9UKT7 428 aa2.71□□□□□ -1.98
PTPRK-220ENST00000531466 ZNF490Q9ULM2 529 aaPredicted RBP2.71□□□□□ -1.98
PTPRK-220ENST00000531466 PRPF19Q9UMS4 504 aaKnown RBP2.71□□□□□ -1.98
PTPRK-220ENST00000531466 NDRG2Q9UN36 371 aaKnown RBP2.71□□□□□ -1.98
PTPRK-220ENST00000531466 KCNIP3Q9Y2W7 256 aa2.71□□□□□ -1.98
PTPRK-220ENST00000531466 GOLT1BQ9Y3E0 138 aa2.71□□□□□ -1.98
PTPRK-220ENST00000531466 MRPS18BQ9Y676 258 aaKnown RBP2.71□□□□□ -1.98
PTPRK-220ENST00000531466 CDH10Q9Y6N8 788 aa2.71□□□□□ -1.98
PTPRK-220ENST00000531466 ARHGEF10O15013 1369 aa2.71□□□□□ -1.98
PTPRK-220ENST00000531466 CEMIPQ8WUJ3 1361 aa2.71□□□□□ -1.98
PTPRK-220ENST00000531466 TONSLQ96HA7 1378 aa2.71□□□□□ -1.98
PTPRK-220ENST00000531466 ARID1AO14497 2285 aa2.71□□□□□ -1.98
PTPRK-220ENST00000531466 UHRF1BP1Q6BDS2 1440 aa2.7□□□□□ -1.98
PTPRK-220ENST00000531466 PPIAL4CA0A0B4J2A2 164 aa2.7□□□□□ -1.98
PTPRK-220ENST00000531466 TEX48A0A1B0GUV7 120 aa2.7□□□□□ -1.98
PTPRK-220ENST00000531466 FAM92AA1XBS5 289 aa2.7□□□□□ -1.98
PTPRK-220ENST00000531466 HIDE1A8MVS5 230 aa2.7□□□□□ -1.98
PTPRK-220ENST00000531466 ZNF99A8MXY4 864 aaPredicted RBP2.7□□□□□ -1.98
PTPRK-220ENST00000531466 TRDCB7Z8K6 153 aa2.7□□□□□ -1.98
PTPRK-220ENST00000531466 H0YIG0 161 aa2.7□□□□□ -1.98
PTPRK-220ENST00000531466 hCG_2039718K7EN88 272 aa2.7□□□□□ -1.98
PTPRK-220ENST00000531466 M0R3G1 203 aa2.7□□□□□ -1.98
PTPRK-220ENST00000531466 CDC7O00311 574 aa2.7□□□□□ -1.98
PTPRK-220ENST00000531466 CCRL2O00421 344 aa2.7□□□□□ -1.98
PTPRK-220ENST00000531466 BTN3A3O00478 584 aa2.7□□□□□ -1.98
PTPRK-220ENST00000531466 PRMT5O14744 637 aaPredicted RBP2.7□□□□□ -1.98
PTPRK-220ENST00000531466 SLC31A1O15431 190 aa2.7□□□□□ -1.98
PTPRK-220ENST00000531466 ARPC5O15511 151 aa2.7□□□□□ -1.98
PTPRK-220ENST00000531466 ADAM12O43184 909 aa2.7□□□□□ -1.98
PTPRK-220ENST00000531466 B4GALT5O43286 388 aa2.7□□□□□ -1.98
PTPRK-220ENST00000531466 PLIN3O60664 434 aa2.7□□□□□ -1.98
PTPRK-220ENST00000531466 BRI3O95415 125 aa2.7□□□□□ -1.98
PTPRK-220ENST00000531466 TXNDC12O95881 172 aa2.7□□□□□ -1.98
PTPRK-220ENST00000531466 IGHG1P01857 330 aa2.7□□□□□ -1.98
PTPRK-220ENST00000531466 HIST1H2AGP0C0S8 130 aaPredicted RBP2.7□□□□□ -1.98
PTPRK-220ENST00000531466 PPIAL4GP0DN37 164 aa2.7□□□□□ -1.98
PTPRK-220ENST00000531466 KCNE1P15382 129 aa2.7□□□□□ -1.98
PTPRK-220ENST00000531466 CELP19835 753 aa2.7□□□□□ -1.98
PTPRK-220ENST00000531466 SRD5A2P31213 254 aa2.7□□□□□ -1.98
PTPRK-220ENST00000531466 SDC4P31431 198 aa2.7□□□□□ -1.98
PTPRK-220ENST00000531466 SPRP35270 261 aaPredicted RBP2.7□□□□□ -1.98
PTPRK-220ENST00000531466 CFHR2P36980 270 aa2.7□□□□□ -1.98
PTPRK-220ENST00000531466 COILP38432 576 aaPredicted RBP2.7□□□□□ -1.98
PTPRK-220ENST00000531466 CCL11P51671 97 aa2.7□□□□□ -1.98
PTPRK-220ENST00000531466 FGF8P55075 233 aaPredicted RBP2.7□□□□□ -1.98
PTPRK-220ENST00000531466 VSX2P58304 361 aaPredicted RBP2.7□□□□□ -1.98
PTPRK-220ENST00000531466 RAB10P61026 200 aa2.7□□□□□ -1.98
PTPRK-220ENST00000531466 KCNJ2P63252 427 aa2.7□□□□□ -1.98
PTPRK-220ENST00000531466 FKBP1BP68106 108 aa2.7□□□□□ -1.98
PTPRK-220ENST00000531466 FAM3AP98173 230 aa2.7□□□□□ -1.98
PTPRK-220ENST00000531466 ASAH1Q13510 395 aa2.7□□□□□ -1.98
PTPRK-220ENST00000531466 KCTD19Q17RG1 926 aaPredicted RBP2.7□□□□□ -1.98
PTPRK-220ENST00000531466 GSG1Q2KHT4 349 aa2.7□□□□□ -1.98
PTPRK-220ENST00000531466 VPS26BQ4G0F5 336 aa2.7□□□□□ -1.98
PTPRK-220ENST00000531466 TNFAIP8L3Q5GJ75 292 aa2.7□□□□□ -1.98
PTPRK-220ENST00000531466 SYPL2Q5VXT5 272 aa2.7□□□□□ -1.98
PTPRK-220ENST00000531466 KCTD16Q68DU8 428 aa2.7□□□□□ -1.98
PTPRK-220ENST00000531466 PRR5LQ6MZQ0 368 aa2.7□□□□□ -1.98
PTPRK-220ENST00000531466 NIPAL1Q6NVV3 410 aa2.7□□□□□ -1.98
PTPRK-220ENST00000531466 SPESP1Q6UW49 350 aa2.7□□□□□ -1.98
PTPRK-220ENST00000531466 DHRS11Q6UWP2 260 aa2.7□□□□□ -1.98
PTPRK-220ENST00000531466 GCNT7Q6ZNI0 430 aa2.7□□□□□ -1.98
PTPRK-220ENST00000531466 ZNF621Q6ZSS3 439 aa2.7□□□□□ -1.98
PTPRK-220ENST00000531466 AHSA2Q719I0 299 aa2.7□□□□□ -1.98
PTPRK-220ENST00000531466 NET1Q7Z628 596 aaPredicted RBP2.7□□□□□ -1.98
PTPRK-220ENST00000531466 MRPL52Q86TS9 123 aaKnown RBP2.7□□□□□ -1.98
PTPRK-220ENST00000531466 TMEM135Q86UB9 458 aa2.7□□□□□ -1.98
PTPRK-220ENST00000531466 ANGPTL5Q86XS5 388 aa2.7□□□□□ -1.98
PTPRK-220ENST00000531466 HIST2H2ABQ8IUE6 130 aaPredicted RBP2.7□□□□□ -1.98
PTPRK-220ENST00000531466 TDHQ8IZJ6 230 aa2.7□□□□□ -1.98
PTPRK-220ENST00000531466 LGI3Q8N145 548 aa2.7□□□□□ -1.98
PTPRK-220ENST00000531466 JAGN1Q8N5M9 183 aa2.7□□□□□ -1.98
PTPRK-220ENST00000531466 RNF149Q8NC42 400 aa2.7□□□□□ -1.98
PTPRK-220ENST00000531466 OR10W1Q8NGF6 305 aa2.7□□□□□ -1.98
PTPRK-220ENST00000531466 OR4A4PQ8NGN8 299 aa2.7□□□□□ -1.98
PTPRK-220ENST00000531466 OR1B1Q8NGR6 318 aa2.7□□□□□ -1.98
PTPRK-220ENST00000531466 OR6K2Q8NGY2 324 aa2.7□□□□□ -1.98
PTPRK-220ENST00000531466 C16orf78Q8WTQ4 265 aa2.7□□□□□ -1.98
PTPRK-220ENST00000531466 CA5BP1Q8WTZ4 195 aa2.7□□□□□ -1.98
PTPRK-220ENST00000531466 PYROXD1Q8WU10 500 aa2.7□□□□□ -1.98
PTPRK-220ENST00000531466 UFD1Q92890 307 aa2.7□□□□□ -1.98
PTPRK-220ENST00000531466 HIST1H2ACQ93077 130 aa2.7□□□□□ -1.98
PTPRK-220ENST00000531466 MCHR2Q969V1 340 aa2.7□□□□□ -1.98
PTPRK-220ENST00000531466 TMEM45BQ96B21 275 aa2.7□□□□□ -1.98
PTPRK-220ENST00000531466 DCPSQ96C86 337 aaKnown RBP2.7□□□□□ -1.98
PTPRK-220ENST00000531466 L3HYPDHQ96EM0 354 aa2.7□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms