RNA–Protein interactions for RNA: ENST00000529986.5

CTNND1-223, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,727 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-223ENST00000529986 SBK3P0C264 359 aa6.95□□□□□ -1.3
CTNND1-223ENST00000529986 EPXP11678 715 aa6.95□□□□□ -1.3
CTNND1-223ENST00000529986 ECI1P42126 302 aa6.95□□□□□ -1.3
CTNND1-223ENST00000529986 CSNK1G2P78368 415 aa6.95□□□□□ -1.3
CTNND1-223ENST00000529986 DOC2BQ14184 412 aa6.95□□□□□ -1.3
CTNND1-223ENST00000529986 MOGAT2Q3SYC2 334 aa6.95□□□□□ -1.3
CTNND1-223ENST00000529986 FAHD1Q6P587 224 aa6.95□□□□□ -1.3
CTNND1-223ENST00000529986 ABHD17CQ6PCB6 329 aa6.95□□□□□ -1.3
CTNND1-223ENST00000529986 HTR3DQ70Z44 454 aa6.95□□□□□ -1.3
CTNND1-223ENST00000529986 ZNF429Q86V71 674 aa6.95□□□□□ -1.3
CTNND1-223ENST00000529986 PTOV1Q86YD1 416 aa6.95□□□□□ -1.3
CTNND1-223ENST00000529986 OR10J5Q8NHC4 309 aa6.95□□□□□ -1.3
CTNND1-223ENST00000529986 ZNRF4Q8WWF5 429 aa6.95□□□□□ -1.3
CTNND1-223ENST00000529986 GNPNAT1Q96EK6 184 aaPredicted RBP6.95□□□□□ -1.3
CTNND1-223ENST00000529986 MSL2Q9HCI7 577 aa6.95□□□□□ -1.3
CTNND1-223ENST00000529986 DHCR7Q9UBM7 475 aaKnown RBP6.95□□□□□ -1.3
CTNND1-223ENST00000529986 OR5V1Q9UGF6 321 aa6.95□□□□□ -1.3
CTNND1-223ENST00000529986 LEUTXA8MZ59 168 aa6.95□□□□□ -1.3
CTNND1-223ENST00000529986 E5RGE8 158 aa6.95□□□□□ -1.3
CTNND1-223ENST00000529986 H3BQ06 376 aaPredicted RBP6.95□□□□□ -1.3
CTNND1-223ENST00000529986 J3QR89 54 aa6.95□□□□□ -1.3
CTNND1-223ENST00000529986 GRPP07492 148 aa6.95□□□□□ -1.3
CTNND1-223ENST00000529986 FOLR3P41439 243 aa6.95□□□□□ -1.3
CTNND1-223ENST00000529986 KCNAB1Q14722 419 aa6.95□□□□□ -1.3
CTNND1-223ENST00000529986 GUK1Q16774 197 aa6.95□□□□□ -1.3
CTNND1-223ENST00000529986 C11orf87Q6NUJ2 197 aa6.95□□□□□ -1.3
CTNND1-223ENST00000529986 SH2D5Q6ZV89 423 aa6.95□□□□□ -1.3
CTNND1-223ENST00000529986 RLN3Q8WXF3 142 aa6.95□□□□□ -1.3
CTNND1-223ENST00000529986 CDCA3Q99618 268 aaPredicted RBP6.95□□□□□ -1.3
CTNND1-223ENST00000529986 USB1Q9BQ65 265 aaKnown RBP6.95□□□□□ -1.3
CTNND1-223ENST00000529986 TIMM29Q9BSF4 260 aa6.95□□□□□ -1.3
CTNND1-223ENST00000529986 CALHM2Q9HA72 323 aa6.95□□□□□ -1.3
CTNND1-223ENST00000529986 ASIC5Q9NY37 505 aa6.95□□□□□ -1.3
CTNND1-223ENST00000529986 NSG2Q9Y328 171 aa6.95□□□□□ -1.3
CTNND1-223ENST00000529986 ZBTB42B2RXF5 422 aa6.95□□□□□ -1.3
CTNND1-223ENST00000529986 SPINK4O60575 86 aa6.95□□□□□ -1.3
CTNND1-223ENST00000529986 CST7O76096 145 aa6.95□□□□□ -1.3
CTNND1-223ENST00000529986 TTRP02766 147 aa6.95□□□□□ -1.3
CTNND1-223ENST00000529986 MMP7P09237 267 aaPredicted RBP6.95□□□□□ -1.3
CTNND1-223ENST00000529986 CALCRP30988 508 aa6.95□□□□□ -1.3
CTNND1-223ENST00000529986 CDK5R1Q15078 307 aa6.95□□□□□ -1.3
CTNND1-223ENST00000529986 GLDNQ6ZMI3 551 aaPredicted RBP6.95□□□□□ -1.3
CTNND1-223ENST00000529986 OR5AS1Q8N127 324 aa6.95□□□□□ -1.3
CTNND1-223ENST00000529986 C17orf78Q8N4C9 275 aa6.95□□□□□ -1.3
CTNND1-223ENST00000529986 SMIM19Q96E16 107 aa6.95□□□□□ -1.3
CTNND1-223ENST00000529986 PDXPQ96GD0 296 aa6.95□□□□□ -1.3
CTNND1-223ENST00000529986 ZNF355PQ9NSJ1 428 aa6.95□□□□□ -1.3
CTNND1-223ENST00000529986 SIRT5Q9NXA8 310 aa6.95□□□□□ -1.3
CTNND1-223ENST00000529986 ABCA3Q99758 1704 aa6.95□□□□□ -1.3
CTNND1-223ENST00000529986 TCAPO15273 167 aa6.95□□□□□ -1.3
CTNND1-223ENST00000529986 WDR1O75083 606 aa6.95□□□□□ -1.3
CTNND1-223ENST00000529986 ZFAND5O76080 213 aa6.95□□□□□ -1.3
CTNND1-223ENST00000529986 CT45A6P0DMU7 189 aa6.95□□□□□ -1.3
CTNND1-223ENST00000529986 CT45A5P0DMU8 189 aa6.95□□□□□ -1.3
CTNND1-223ENST00000529986 CT45A7P0DMV0 189 aa6.95□□□□□ -1.3
CTNND1-223ENST00000529986 CT45A8P0DMV1 189 aa6.95□□□□□ -1.3
CTNND1-223ENST00000529986 CT45A9P0DMV2 189 aa6.95□□□□□ -1.3
CTNND1-223ENST00000529986 RPS16P62249 146 aaKnown RBP6.95□□□□□ -1.3
CTNND1-223ENST00000529986 ZNF85Q03923 595 aa6.95□□□□□ -1.3
CTNND1-223ENST00000529986 CT45A2Q5DJT8 189 aa6.95□□□□□ -1.3
CTNND1-223ENST00000529986 CT45A1Q5HYN5 189 aa6.95□□□□□ -1.3
CTNND1-223ENST00000529986 ADGRG3Q86Y34 549 aa6.95□□□□□ -1.3
CTNND1-223ENST00000529986 ZNF595Q8IYB9 648 aa6.95□□□□□ -1.3
CTNND1-223ENST00000529986 OR1J1Q8NGS3 322 aa6.95□□□□□ -1.3
CTNND1-223ENST00000529986 CT45A3Q8NHU0 189 aa6.95□□□□□ -1.3
CTNND1-223ENST00000529986 SMIM4Q8WVI0 70 aa6.95□□□□□ -1.3
CTNND1-223ENST00000529986 ARHGDIGQ99819 225 aa6.95□□□□□ -1.3
CTNND1-223ENST00000529986 RBM38Q9H0Z9 239 aaKnown RBP6.95□□□□□ -1.3
CTNND1-223ENST00000529986 EVA1AQ9H8M9 152 aa6.95□□□□□ -1.3
CTNND1-223ENST00000529986 DLL4Q9NR61 685 aa6.95□□□□□ -1.3
CTNND1-223ENST00000529986 BLACEA4D250 179 aa6.94□□□□□ -1.3
CTNND1-223ENST00000529986 TIMM8AO60220 97 aaPredicted RBP6.94□□□□□ -1.3
CTNND1-223ENST00000529986 SLC25A4P12235 298 aa6.94□□□□□ -1.3
CTNND1-223ENST00000529986 ARL16Q0P5N6 197 aa6.94□□□□□ -1.3
CTNND1-223ENST00000529986 C1orf140Q5VVS0 124 aa6.94□□□□□ -1.3
CTNND1-223ENST00000529986 ZNF626Q68DY1 528 aa6.94□□□□□ -1.3
CTNND1-223ENST00000529986 CBLN2Q8IUK8 224 aa6.94□□□□□ -1.3
CTNND1-223ENST00000529986 ETFBKMTQ8IXQ9 262 aa6.94□□□□□ -1.3
CTNND1-223ENST00000529986 EMG1Q92979 244 aaKnown RBP6.94□□□□□ -1.3
CTNND1-223ENST00000529986 SLC22A12Q96S37 553 aa6.94□□□□□ -1.3
CTNND1-223ENST00000529986 GINS3Q9BRX5 216 aa6.94□□□□□ -1.3
CTNND1-223ENST00000529986 RNF150Q9ULK6 438 aa6.94□□□□□ -1.3
CTNND1-223ENST00000529986 RCL1Q9Y2P8 373 aaKnown RBP6.94□□□□□ -1.3
CTNND1-223ENST00000529986 SLCO1B1Q9Y6L6 691 aa6.94□□□□□ -1.3
CTNND1-223ENST00000529986 SLX4Q8IY92 1834 aa6.94□□□□□ -1.3
CTNND1-223ENST00000529986 TMEM189-UBE2V1I3L0A0 370 aa6.94□□□□□ -1.3
CTNND1-223ENST00000529986 HYAL3O43820 417 aaPredicted RBP6.94□□□□□ -1.3
CTNND1-223ENST00000529986 CLEC3BP05452 202 aa6.94□□□□□ -1.3
CTNND1-223ENST00000529986 CTSLP07711 333 aa6.94□□□□□ -1.3
CTNND1-223ENST00000529986 PIGPP57054 158 aa6.94□□□□□ -1.3
CTNND1-223ENST00000529986 RPL27P61353 136 aaKnown RBP6.94□□□□□ -1.3
CTNND1-223ENST00000529986 TPBGQ13641 420 aa6.94□□□□□ -1.3
CTNND1-223ENST00000529986 HSF5Q4G112 596 aaPredicted RBP6.94□□□□□ -1.3
CTNND1-223ENST00000529986 FAM209AQ5JX71 171 aa6.94□□□□□ -1.3
CTNND1-223ENST00000529986 MISPQ8IVT2 679 aa6.94□□□□□ -1.3
CTNND1-223ENST00000529986 ZNF687Q8N1G0 1237 aa6.94□□□□□ -1.3
CTNND1-223ENST00000529986 ISOC2Q96AB3 205 aa6.94□□□□□ -1.3
CTNND1-223ENST00000529986 LCORQ96JN0 433 aaPredicted RBP6.94□□□□□ -1.3
CTNND1-223ENST00000529986 P2RY12Q9H244 342 aa6.94□□□□□ -1.3
CTNND1-223ENST00000529986 SEMA6CQ9H3T2 930 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms