RNA–Protein interactions for RNA: ENST00000525685.5

CD44-219, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 728 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-219ENST00000525685 CCNL2Q96S94 520 aaPredicted RBP2.86□□□□□ -1.95
CD44-219ENST00000525685 STMN4Q9H169 189 aaPredicted RBP2.86□□□□□ -1.95
CD44-219ENST00000525685 PRORYQ9H606 182 aa2.86□□□□□ -1.95
CD44-219ENST00000525685 ACTR8Q9H981 624 aa2.86□□□□□ -1.95
CD44-219ENST00000525685 GPN2Q9H9Y4 310 aaPredicted RBP2.86□□□□□ -1.95
CD44-219ENST00000525685 NMRAL1Q9HBL8 299 aa2.86□□□□□ -1.95
CD44-219ENST00000525685 DDX18Q9NVP1 670 aaKnown RBP2.86□□□□□ -1.95
CD44-219ENST00000525685 RDH8Q9NYR8 311 aa2.86□□□□□ -1.95
CD44-219ENST00000525685 CD274Q9NZQ7 290 aa2.86□□□□□ -1.95
CD44-219ENST00000525685 TMEM216Q9P0N5 145 aa2.86□□□□□ -1.95
CD44-219ENST00000525685 LGALS13Q9UHV8 139 aa2.86□□□□□ -1.95
CD44-219ENST00000525685 ATPIF1Q9UII2 106 aa2.86□□□□□ -1.95
CD44-219ENST00000525685 KLHL21Q9UJP4 597 aa2.86□□□□□ -1.95
CD44-219ENST00000525685 PTBP2Q9UKA9 531 aaKnown RBP2.86□□□□□ -1.95
CD44-219ENST00000525685 MGAT4BQ9UQ53 548 aa2.86□□□□□ -1.95
CD44-219ENST00000525685 EXOSC1Q9Y3B2 195 aaKnown RBP2.86□□□□□ -1.95
CD44-219ENST00000525685 MRPS18BQ9Y676 258 aaKnown RBP2.86□□□□□ -1.95
CD44-219ENST00000525685 AP1M2Q9Y6Q5 423 aa2.86□□□□□ -1.95
CD44-219ENST00000525685 KNL1Q8NG31 2342 aa2.86□□□□□ -1.95
CD44-219ENST00000525685 NUP210LQ5VU65 1888 aa2.86□□□□□ -1.95
CD44-219ENST00000525685 UNC13CQ8NB66 2214 aa2.85□□□□□ -1.95
CD44-219ENST00000525685 KCNE1BA0A087WTH5 132 aa2.85□□□□□ -1.95
CD44-219ENST00000525685 A0A1B0GX78 115 aa2.85□□□□□ -1.95
CD44-219ENST00000525685 A0A1W2PQ72 361 aa2.85□□□□□ -1.95
CD44-219ENST00000525685 ZNF860A6NHJ4 632 aa2.85□□□□□ -1.95
CD44-219ENST00000525685 GOLGA6L10A6NI86 522 aa2.85□□□□□ -1.95
CD44-219ENST00000525685 C21orf140B9A014 251 aa2.85□□□□□ -1.95
CD44-219ENST00000525685 C4orf51C9J302 202 aa2.85□□□□□ -1.95
CD44-219ENST00000525685 C9J4A7 227 aa2.85□□□□□ -1.95
CD44-219ENST00000525685 E9PLD3 99 aa2.85□□□□□ -1.95
CD44-219ENST00000525685 K7ENP7 123 aa2.85□□□□□ -1.95
CD44-219ENST00000525685 K7EPI3 171 aa2.85□□□□□ -1.95
CD44-219ENST00000525685 NDUFAB1O14561 156 aa2.85□□□□□ -1.95
CD44-219ENST00000525685 OR7A17O14581 309 aa2.85□□□□□ -1.95
CD44-219ENST00000525685 SULT1B1O43704 296 aa2.85□□□□□ -1.95
CD44-219ENST00000525685 OR1F1O43749 312 aa2.85□□□□□ -1.95
CD44-219ENST00000525685 PLIN3O60664 434 aa2.85□□□□□ -1.95
CD44-219ENST00000525685 SMIM24O75264 130 aa2.85□□□□□ -1.95
CD44-219ENST00000525685 RDH16O75452 317 aa2.85□□□□□ -1.95
CD44-219ENST00000525685 SCGB2A1O75556 95 aa2.85□□□□□ -1.95
CD44-219ENST00000525685 TOXO94900 526 aa2.85□□□□□ -1.95
CD44-219ENST00000525685 NDUFA7O95182 113 aa2.85□□□□□ -1.95
CD44-219ENST00000525685 OPN1MWP04001 364 aa2.85□□□□□ -1.95
CD44-219ENST00000525685 KLK3P07288 261 aaPredicted RBP2.85□□□□□ -1.95
CD44-219ENST00000525685 RBP1P09455 135 aa2.85□□□□□ -1.95
CD44-219ENST00000525685 SLC35G6P0C7Q6 338 aa2.85□□□□□ -1.95
CD44-219ENST00000525685 C1GALT1C1LP0DN25 315 aa2.85□□□□□ -1.95
CD44-219ENST00000525685 OPN1MW2P0DN77 364 aa2.85□□□□□ -1.95
CD44-219ENST00000525685 OPN1MW3P0DN78 364 aa2.85□□□□□ -1.95
CD44-219ENST00000525685 H2AFXP16104 143 aaPredicted RBP2.85□□□□□ -1.95
CD44-219ENST00000525685 ZNF3P17036 446 aa2.85□□□□□ -1.95
CD44-219ENST00000525685 IL1RNP18510 177 aa2.85□□□□□ -1.95
CD44-219ENST00000525685 TCN2P20062 427 aa2.85□□□□□ -1.95
CD44-219ENST00000525685 FASP25445 335 aa2.85□□□□□ -1.95
CD44-219ENST00000525685 IL2RGP31785 369 aa2.85□□□□□ -1.95
CD44-219ENST00000525685 RPL4P36578 427 aaKnown RBP2.85□□□□□ -1.95
CD44-219ENST00000525685 OR1D4P47884 311 aa2.85□□□□□ -1.95
CD44-219ENST00000525685 MEOX2P50222 304 aa2.85□□□□□ -1.95
CD44-219ENST00000525685 UCNP55089 124 aa2.85□□□□□ -1.95
CD44-219ENST00000525685 DCDP81605 110 aaKnown RBP2.85□□□□□ -1.95
CD44-219ENST00000525685 IL1RL1Q01638 556 aa2.85□□□□□ -1.95
CD44-219ENST00000525685 RELAQ04206 551 aa2.85□□□□□ -1.95
CD44-219ENST00000525685 RGS1Q08116 209 aa2.85□□□□□ -1.95
CD44-219ENST00000525685 IFFO1Q0D2I5 559 aa2.85□□□□□ -1.95
CD44-219ENST00000525685 CHIT1Q13231 466 aa2.85□□□□□ -1.95
CD44-219ENST00000525685 DOC2AQ14183 400 aa2.85□□□□□ -1.95
CD44-219ENST00000525685 KIAA0040Q15053 153 aa2.85□□□□□ -1.95
CD44-219ENST00000525685 NCF4Q15080 339 aa2.85□□□□□ -1.95
CD44-219ENST00000525685 CYP51A1Q16850 503 aa2.85□□□□□ -1.95
CD44-219ENST00000525685 RNF212Q495C1 297 aa2.85□□□□□ -1.95
CD44-219ENST00000525685 UTF1Q5T230 341 aa2.85□□□□□ -1.95
CD44-219ENST00000525685 OR8G2PQ6IF36 304 aa2.85□□□□□ -1.95
CD44-219ENST00000525685 TMIGD1Q6UXZ0 262 aa2.85□□□□□ -1.95
CD44-219ENST00000525685 NCCRP1Q6ZVX7 275 aaPredicted RBP2.85□□□□□ -1.95
CD44-219ENST00000525685 RPS27LQ71UM5 84 aaKnown RBP2.85□□□□□ -1.95
CD44-219ENST00000525685 PRSS41Q7RTY9 318 aa2.85□□□□□ -1.95
CD44-219ENST00000525685 SYVN1Q86TM6 617 aa2.85□□□□□ -1.95
CD44-219ENST00000525685 GRAMD2AQ8IUY3 354 aa2.85□□□□□ -1.95
CD44-219ENST00000525685 RIBC1Q8N443 379 aaPredicted RBP2.85□□□□□ -1.95
CD44-219ENST00000525685 NT5CQ8TCD5 201 aa2.85□□□□□ -1.95
CD44-219ENST00000525685 SELENOMQ8WWX9 145 aa2.85□□□□□ -1.95
CD44-219ENST00000525685 RERGQ96A58 199 aaPredicted RBP2.85□□□□□ -1.95
CD44-219ENST00000525685 KIAA1143Q96AT1 154 aaPredicted RBP2.85□□□□□ -1.95
CD44-219ENST00000525685 WDR34Q96EX3 536 aa2.85□□□□□ -1.95
CD44-219ENST00000525685 ARL5BQ96KC2 179 aa2.85□□□□□ -1.95
CD44-219ENST00000525685 MRPL57Q9BQC6 102 aaKnown RBP2.85□□□□□ -1.95
CD44-219ENST00000525685 AIF1LQ9BQI0 150 aa2.85□□□□□ -1.95
CD44-219ENST00000525685 CCDC77Q9BR77 488 aa2.85□□□□□ -1.95
CD44-219ENST00000525685 PAXXQ9BUH6 204 aa2.85□□□□□ -1.95
CD44-219ENST00000525685 EFCAB11Q9BUY7 163 aa2.85□□□□□ -1.95
CD44-219ENST00000525685 TMEM109Q9BVC6 243 aa2.85□□□□□ -1.95
CD44-219ENST00000525685 ROPN1BQ9BZX4 212 aaPredicted RBP2.85□□□□□ -1.95
CD44-219ENST00000525685 AICDAQ9GZX7 198 aa2.85□□□□□ -1.95
CD44-219ENST00000525685 EHD1Q9H4M9 534 aa2.85□□□□□ -1.95
CD44-219ENST00000525685 LPAR2Q9HBW0 351 aa2.85□□□□□ -1.95
CD44-219ENST00000525685 OPTCQ9UBM4 332 aa2.85□□□□□ -1.95
CD44-219ENST00000525685 CTSFQ9UBX1 484 aa2.85□□□□□ -1.95
CD44-219ENST00000525685 Q9UF83 564 aa2.85□□□□□ -1.95
CD44-219ENST00000525685 PCTPQ9UKL6 214 aa2.85□□□□□ -1.95
CD44-219ENST00000525685 TMCO1Q9UM00 188 aa2.85□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms