RNA–Protein interactions for RNA: ENST00000525303.5

TRAPPC4-206, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2 BASIC

Gene TRAPPC4, Length 654 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-206ENST00000525303 EI24O14681 340 aa8.11□□□□□ -1.11
TRAPPC4-206ENST00000525303 CASQ2O14958 399 aaPredicted RBP8.11□□□□□ -1.11
TRAPPC4-206ENST00000525303 SPRY3O43610 288 aa8.11□□□□□ -1.11
TRAPPC4-206ENST00000525303 TRMUO75648 421 aaKnown RBP8.11□□□□□ -1.11
TRAPPC4-206ENST00000525303 SOX14O95416 240 aa8.11□□□□□ -1.11
TRAPPC4-206ENST00000525303 PPP1R3DO95685 299 aa8.11□□□□□ -1.11
TRAPPC4-206ENST00000525303 FSHBP01225 129 aa8.11□□□□□ -1.11
TRAPPC4-206ENST00000525303 PTHP01270 115 aa8.11□□□□□ -1.11
TRAPPC4-206ENST00000525303 MT-ND5P03915 603 aa8.11□□□□□ -1.11
TRAPPC4-206ENST00000525303 ALPLP05186 524 aa8.11□□□□□ -1.11
TRAPPC4-206ENST00000525303 HKR1P10072 659 aa8.11□□□□□ -1.11
TRAPPC4-206ENST00000525303 ZNF3P17036 446 aa8.11□□□□□ -1.11
TRAPPC4-206ENST00000525303 PAICSP22234 425 aaKnown RBP8.11□□□□□ -1.11
TRAPPC4-206ENST00000525303 CCNOP22674 350 aa8.11□□□□□ -1.11
TRAPPC4-206ENST00000525303 POU1F1P28069 291 aa8.11□□□□□ -1.11
TRAPPC4-206ENST00000525303 CRABP1P29762 137 aa8.11□□□□□ -1.11
TRAPPC4-206ENST00000525303 GRK5P34947 590 aa8.11□□□□□ -1.11
TRAPPC4-206ENST00000525303 APLNRP35414 380 aa8.11□□□□□ -1.11
TRAPPC4-206ENST00000525303 ZNF81P51508 661 aa8.11□□□□□ -1.11
TRAPPC4-206ENST00000525303 CRISP1P54107 249 aa8.11□□□□□ -1.11
TRAPPC4-206ENST00000525303 FXYD6P3P58550 94 aa8.11□□□□□ -1.11
TRAPPC4-206ENST00000525303 PLP2Q04941 152 aa8.11□□□□□ -1.11
TRAPPC4-206ENST00000525303 SLC34A1Q06495 639 aa8.11□□□□□ -1.11
TRAPPC4-206ENST00000525303 CD47Q08722 323 aa8.11□□□□□ -1.11
TRAPPC4-206ENST00000525303 MOGQ16653 247 aa8.11□□□□□ -1.11
TRAPPC4-206ENST00000525303 HIST3H3Q16695 136 aa8.11□□□□□ -1.11
TRAPPC4-206ENST00000525303 CLEC12AQ5QGZ9 265 aa8.11□□□□□ -1.11
TRAPPC4-206ENST00000525303 DPPA2Q7Z7J5 298 aa8.11□□□□□ -1.11
TRAPPC4-206ENST00000525303 LRRC18Q8N456 261 aa8.11□□□□□ -1.11
TRAPPC4-206ENST00000525303 CBR4Q8N4T8 237 aa8.11□□□□□ -1.11
TRAPPC4-206ENST00000525303 OR1J1Q8NGS3 322 aa8.11□□□□□ -1.11
TRAPPC4-206ENST00000525303 CCL17Q92583 94 aa8.11□□□□□ -1.11
TRAPPC4-206ENST00000525303 DVL3Q92997 716 aaPredicted RBP8.11□□□□□ -1.11
TRAPPC4-206ENST00000525303 PLEKHA8Q96JA3 519 aa8.11□□□□□ -1.11
TRAPPC4-206ENST00000525303 Q96M85 177 aa8.11□□□□□ -1.11
TRAPPC4-206ENST00000525303 RDH12Q96NR8 316 aa8.11□□□□□ -1.11
TRAPPC4-206ENST00000525303 DUX5Q96PT3 197 aa8.11□□□□□ -1.11
TRAPPC4-206ENST00000525303 C1QTNF5Q9BXJ0 243 aa8.11□□□□□ -1.11
TRAPPC4-206ENST00000525303 MRPL13Q9BYD1 178 aaKnown RBP8.11□□□□□ -1.11
TRAPPC4-206ENST00000525303 ZNF696Q9H7X3 374 aa8.11□□□□□ -1.11
TRAPPC4-206ENST00000525303 RNPEPL1Q9HAU8 725 aa8.11□□□□□ -1.11
TRAPPC4-206ENST00000525303 SLC25A19Q9HC21 320 aa8.11□□□□□ -1.11
TRAPPC4-206ENST00000525303 UBAP1Q9NZ09 502 aa8.11□□□□□ -1.11
TRAPPC4-206ENST00000525303 IL20RAQ9UHF4 553 aa8.11□□□□□ -1.11
TRAPPC4-206ENST00000525303 RRP15Q9Y3B9 282 aaKnown RBP8.11□□□□□ -1.11
TRAPPC4-206ENST00000525303 ADAM18Q9Y3Q7 739 aa8.11□□□□□ -1.11
TRAPPC4-206ENST00000525303 SOCS2O14508 198 aa8.1□□□□□ -1.11
TRAPPC4-206ENST00000525303 IGHV1-46P01743 117 aa8.1□□□□□ -1.11
TRAPPC4-206ENST00000525303 IGHV3-13P01766 116 aa8.1□□□□□ -1.11
TRAPPC4-206ENST00000525303 MMP7P09237 267 aaPredicted RBP8.1□□□□□ -1.11
TRAPPC4-206ENST00000525303 ZNF26P17031 533 aaPredicted RBP8.1□□□□□ -1.11
TRAPPC4-206ENST00000525303 MPV17P39210 176 aa8.1□□□□□ -1.11
TRAPPC4-206ENST00000525303 CENPAP49450 140 aa8.1□□□□□ -1.11
TRAPPC4-206ENST00000525303 MMP15P51511 669 aa8.1□□□□□ -1.11
TRAPPC4-206ENST00000525303 ZNF133P52736 654 aaPredicted RBP8.1□□□□□ -1.11
TRAPPC4-206ENST00000525303 CDK5Q00535 292 aa8.1□□□□□ -1.11
TRAPPC4-206ENST00000525303 HSF2Q03933 536 aa8.1□□□□□ -1.11
TRAPPC4-206ENST00000525303 KHDRBS1Q07666 443 aaKnown RBP eCLIP8.1□□□□□ -1.11
TRAPPC4-206ENST00000525303 GINS1Q14691 196 aa8.1□□□□□ -1.11
TRAPPC4-206ENST00000525303 NRN1LQ496H8 165 aa8.1□□□□□ -1.11
TRAPPC4-206ENST00000525303 TMEM255AQ5JRV8 349 aa8.1□□□□□ -1.11
TRAPPC4-206ENST00000525303 FAM209AQ5JX71 171 aa8.1□□□□□ -1.11
TRAPPC4-206ENST00000525303 SPATA46Q5T0L3 261 aa8.1□□□□□ -1.11
TRAPPC4-206ENST00000525303 C10orf128Q5T292 105 aa8.1□□□□□ -1.11
TRAPPC4-206ENST00000525303 RBMS3Q6XE24 437 aaKnown RBP8.1□□□□□ -1.11
TRAPPC4-206ENST00000525303 ZNF101Q8IZC7 436 aa8.1□□□□□ -1.11
TRAPPC4-206ENST00000525303 SIGLECL1Q8N7X8 197 aa8.1□□□□□ -1.11
TRAPPC4-206ENST00000525303 SYT14Q8NB59 555 aa8.1□□□□□ -1.11
TRAPPC4-206ENST00000525303 CPEB3Q8NE35 698 aaKnown RBP8.1□□□□□ -1.11
TRAPPC4-206ENST00000525303 ST7LQ8TDW4 575 aa8.1□□□□□ -1.11
TRAPPC4-206ENST00000525303 IPCEF1Q8WWN9 437 aaPredicted RBP8.1□□□□□ -1.11
TRAPPC4-206ENST00000525303 HDAC2Q92769 488 aaKnown RBP8.1□□□□□ -1.11
TRAPPC4-206ENST00000525303 MCHR2Q969V1 340 aa8.1□□□□□ -1.11
TRAPPC4-206ENST00000525303 RASD2Q96D21 266 aa8.1□□□□□ -1.11
TRAPPC4-206ENST00000525303 GABARAPL3Q9BY60 117 aa8.1□□□□□ -1.11
TRAPPC4-206ENST00000525303 CMC2Q9NRP2 79 aa8.1□□□□□ -1.11
TRAPPC4-206ENST00000525303 VSX1Q9NZR4 365 aaPredicted RBP8.1□□□□□ -1.11
TRAPPC4-206ENST00000525303 PLSCR5A0PG75 271 aa8.09□□□□□ -1.11
TRAPPC4-206ENST00000525303 DNAJC9-AS1A6NH13 148 aa8.09□□□□□ -1.11
TRAPPC4-206ENST00000525303 ZSCAN5BA6NJL1 495 aa8.09□□□□□ -1.11
TRAPPC4-206ENST00000525303 HIST1H1CP16403 213 aaKnown RBP8.09□□□□□ -1.11
TRAPPC4-206ENST00000525303 PRTN3P24158 256 aa8.09□□□□□ -1.11
TRAPPC4-206ENST00000525303 ZFP36P26651 326 aaKnown RBP8.09□□□□□ -1.11
TRAPPC4-206ENST00000525303 STOMP27105 288 aa8.09□□□□□ -1.11
TRAPPC4-206ENST00000525303 GCH1P30793 250 aa8.09□□□□□ -1.11
TRAPPC4-206ENST00000525303 WNT5AP41221 380 aa8.09□□□□□ -1.11
TRAPPC4-206ENST00000525303 BLVRAP53004 296 aa8.09□□□□□ -1.11
TRAPPC4-206ENST00000525303 CDC42P60953 191 aa8.09□□□□□ -1.11
TRAPPC4-206ENST00000525303 DEFA6Q01524 100 aa8.09□□□□□ -1.11
TRAPPC4-206ENST00000525303 SLC3A1Q07837 685 aa8.09□□□□□ -1.11
TRAPPC4-206ENST00000525303 HNRNPA0Q13151 305 aaKnown RBP8.09□□□□□ -1.11
TRAPPC4-206ENST00000525303 PTGES3Q15185 160 aaKnown RBP8.09□□□□□ -1.11
TRAPPC4-206ENST00000525303 ZNF718Q3SXZ3 478 aa8.09□□□□□ -1.11
TRAPPC4-206ENST00000525303 PDLIM3Q53GG5 364 aaPredicted RBP8.09□□□□□ -1.11
TRAPPC4-206ENST00000525303 SPRNQ5BIV9 151 aa8.09□□□□□ -1.11
TRAPPC4-206ENST00000525303 MESTQ5EB52 335 aa8.09□□□□□ -1.11
TRAPPC4-206ENST00000525303 ARMCX4Q5H9R4 360 aa8.09□□□□□ -1.11
TRAPPC4-206ENST00000525303 PABPC1L2AQ5JQF8 200 aa8.09□□□□□ -1.11
TRAPPC4-206ENST00000525303 OGFRL1Q5TC84 451 aaPredicted RBP8.09□□□□□ -1.11
TRAPPC4-206ENST00000525303 LEG1Q6P5S2 330 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms