RNA–Protein interactions for RNA: ENST00000524023.1

HDAC9-228, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,199 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-228ENST00000524023 RLN2P04090 185 aa9.87□□□□□ -0.83
HDAC9-228ENST00000524023 GLB1P16278 677 aa9.87□□□□□ -0.83
HDAC9-228ENST00000524023 MGMTP16455 207 aa9.87□□□□□ -0.83
HDAC9-228ENST00000524023 AGTR1P30556 359 aa9.87□□□□□ -0.83
HDAC9-228ENST00000524023 GNALP38405 381 aa9.87□□□□□ -0.83
HDAC9-228ENST00000524023 FGL1Q08830 312 aa9.87□□□□□ -0.83
HDAC9-228ENST00000524023 FOXF1Q12946 379 aa9.87□□□□□ -0.83
HDAC9-228ENST00000524023 CDNFQ49AH0 187 aa9.87□□□□□ -0.83
HDAC9-228ENST00000524023 LPCAT3Q6P1A2 487 aa9.87□□□□□ -0.83
HDAC9-228ENST00000524023 TRAPPC6BQ86SZ2 158 aa9.87□□□□□ -0.83
HDAC9-228ENST00000524023 KMT5CQ86Y97 462 aa9.87□□□□□ -0.83
HDAC9-228ENST00000524023 BVESQ8NE79 360 aa9.87□□□□□ -0.83
HDAC9-228ENST00000524023 NFAM1Q8NET5 270 aaPredicted RBP9.87□□□□□ -0.83
HDAC9-228ENST00000524023 OR10H5Q8NGA6 315 aa9.87□□□□□ -0.83
HDAC9-228ENST00000524023 OR52N4Q8NGI2 321 aa9.87□□□□□ -0.83
HDAC9-228ENST00000524023 FAM46BQ96A09 425 aa9.87□□□□□ -0.83
HDAC9-228ENST00000524023 CMBLQ96DG6 245 aa9.87□□□□□ -0.83
HDAC9-228ENST00000524023 ADAT3Q96EY9 351 aaPredicted RBP9.87□□□□□ -0.83
HDAC9-228ENST00000524023 PRRT1Q99946 306 aa9.87□□□□□ -0.83
HDAC9-228ENST00000524023 EMC6Q9BV81 110 aa9.87□□□□□ -0.83
HDAC9-228ENST00000524023 SHARPINQ9H0F6 387 aa9.87□□□□□ -0.83
HDAC9-228ENST00000524023 CYB5R1Q9UHQ9 305 aa9.87□□□□□ -0.83
HDAC9-228ENST00000524023 CA14Q9ULX7 337 aa9.87□□□□□ -0.83
HDAC9-228ENST00000524023 NOP16Q9Y3C1 178 aaKnown RBP9.87□□□□□ -0.83
HDAC9-228ENST00000524023 MTCH2Q9Y6C9 303 aa9.87□□□□□ -0.83
HDAC9-228ENST00000524023 RALGAPA1Q6GYQ0 2036 aa9.86□□□□□ -0.83
HDAC9-228ENST00000524023 ADAMTS9Q9P2N4 1935 aa9.86□□□□□ -0.83
HDAC9-228ENST00000524023 A0A0D9SG52 128 aa9.86□□□□□ -0.83
HDAC9-228ENST00000524023 TMEM200CA6NKL6 621 aa9.86□□□□□ -0.83
HDAC9-228ENST00000524023 VSTM2BA6NLU5 285 aa9.86□□□□□ -0.83
HDAC9-228ENST00000524023 H3BML4 177 aa9.86□□□□□ -0.83
HDAC9-228ENST00000524023 TEX46H3BTG2 121 aa9.86□□□□□ -0.83
HDAC9-228ENST00000524023 LGALS8O00214 317 aa9.86□□□□□ -0.83
HDAC9-228ENST00000524023 SYT7O43581 403 aa9.86□□□□□ -0.83
HDAC9-228ENST00000524023 HPP00738 406 aa9.86□□□□□ -0.83
HDAC9-228ENST00000524023 HLA-AP01891 365 aaKnown RBP9.86□□□□□ -0.83
HDAC9-228ENST00000524023 FOSL2P15408 326 aa9.86□□□□□ -0.83
HDAC9-228ENST00000524023 ZBTB25P24278 435 aa9.86□□□□□ -0.83
HDAC9-228ENST00000524023 MPZP25189 248 aa9.86□□□□□ -0.83
HDAC9-228ENST00000524023 EIF1AXP47813 144 aaKnown RBP9.86□□□□□ -0.83
HDAC9-228ENST00000524023 BIDP55957 195 aa9.86□□□□□ -0.83
HDAC9-228ENST00000524023 GPR85P60893 370 aa9.86□□□□□ -0.83
HDAC9-228ENST00000524023 CXADRP78310 365 aa9.86□□□□□ -0.83
HDAC9-228ENST00000524023 QRFPP83859 136 aa9.86□□□□□ -0.83
HDAC9-228ENST00000524023 RNASE10Q5GAN6 216 aaKnown RBP9.86□□□□□ -0.83
HDAC9-228ENST00000524023 KLHL24Q6TFL4 600 aa9.86□□□□□ -0.83
HDAC9-228ENST00000524023 HSD17B13Q7Z5P4 300 aaPredicted RBP9.86□□□□□ -0.83
HDAC9-228ENST00000524023 ANKRD37Q7Z713 158 aa9.86□□□□□ -0.83
HDAC9-228ENST00000524023 SLC25A42Q86VD7 318 aa9.86□□□□□ -0.83
HDAC9-228ENST00000524023 GVQW1Q8N7I0 195 aa9.86□□□□□ -0.83
HDAC9-228ENST00000524023 OR1M1Q8NGA1 313 aa9.86□□□□□ -0.83
HDAC9-228ENST00000524023 ZBTB8AQ96BR9 441 aa9.86□□□□□ -0.83
HDAC9-228ENST00000524023 PBOV1Q9GZY1 135 aa9.86□□□□□ -0.83
HDAC9-228ENST00000524023 PTGES2Q9H7Z7 377 aa9.86□□□□□ -0.83
HDAC9-228ENST00000524023 FANCFQ9NPI8 374 aa9.86□□□□□ -0.83
HDAC9-228ENST00000524023 SERINC1Q9NRX5 453 aa9.86□□□□□ -0.83
HDAC9-228ENST00000524023 ALKBH4Q9NXW9 302 aa9.86□□□□□ -0.83
HDAC9-228ENST00000524023 KLHL13Q9P2N7 655 aa9.86□□□□□ -0.83
HDAC9-228ENST00000524023 B3GALT5Q9Y2C3 310 aa9.86□□□□□ -0.83
HDAC9-228ENST00000524023 HRH3Q9Y5N1 445 aa9.86□□□□□ -0.83
HDAC9-228ENST00000524023 BET1O15155 118 aa9.85□□□□□ -0.83
HDAC9-228ENST00000524023 SMAD9O15198 467 aaKnown RBP9.85□□□□□ -0.83
HDAC9-228ENST00000524023 EFNA2O43921 213 aa9.85□□□□□ -0.83
HDAC9-228ENST00000524023 BPNT1O95861 308 aa9.85□□□□□ -0.83
HDAC9-228ENST00000524023 UBBP0CG47 229 aa9.85□□□□□ -0.83
HDAC9-228ENST00000524023 VSIG8P0DPA2 414 aa9.85□□□□□ -0.83
HDAC9-228ENST00000524023 LIPCP11150 499 aa9.85□□□□□ -0.83
HDAC9-228ENST00000524023 PRKACBP22694 351 aa9.85□□□□□ -0.83
HDAC9-228ENST00000524023 RPS27AP62979 156 aaKnown RBP9.85□□□□□ -0.83
HDAC9-228ENST00000524023 UBA52P62987 128 aaKnown RBP9.85□□□□□ -0.83
HDAC9-228ENST00000524023 LIN54Q6MZP7 749 aa9.85□□□□□ -0.83
HDAC9-228ENST00000524023 RHBDD2Q6NTF9 364 aa9.85□□□□□ -0.83
HDAC9-228ENST00000524023 C3orf33Q6P1S2 294 aa9.85□□□□□ -0.83
HDAC9-228ENST00000524023 TMEM81Q6P7N7 255 aa9.85□□□□□ -0.83
HDAC9-228ENST00000524023 WDR74Q6RFH5 385 aaPredicted RBP9.85□□□□□ -0.83
HDAC9-228ENST00000524023 SLC25A45Q8N413 288 aa9.85□□□□□ -0.83
HDAC9-228ENST00000524023 SLC22A24Q8N4F4 322 aa9.85□□□□□ -0.83
HDAC9-228ENST00000524023 EIF4E3Q8N5X7 224 aaKnown RBP9.85□□□□□ -0.83
HDAC9-228ENST00000524023 CHST4Q8NCG5 386 aa9.85□□□□□ -0.83
HDAC9-228ENST00000524023 OR10S1Q8NGN2 331 aa9.85□□□□□ -0.83
HDAC9-228ENST00000524023 NUBPLQ8TB37 319 aa9.85□□□□□ -0.83
HDAC9-228ENST00000524023 ST8SIA2Q92186 375 aa9.85□□□□□ -0.83
HDAC9-228ENST00000524023 MRGPRFQ96AM1 343 aa9.85□□□□□ -0.83
HDAC9-228ENST00000524023 NUDT22Q9BRQ3 303 aa9.85□□□□□ -0.83
HDAC9-228ENST00000524023 UQCC2Q9BRT2 126 aa9.85□□□□□ -0.83
HDAC9-228ENST00000524023 FOXQ1Q9C009 403 aa9.85□□□□□ -0.83
HDAC9-228ENST00000524023 ZNF768Q9H5H4 540 aaKnown RBP9.85□□□□□ -0.83
HDAC9-228ENST00000524023 GPN3Q9UHW5 284 aaPredicted RBP9.85□□□□□ -0.83
HDAC9-228ENST00000524023 IGLV3-12A0A075B6K2 115 aa9.85□□□□□ -0.83
HDAC9-228ENST00000524023 A0A1W2PNV4 684 aa9.85□□□□□ -0.83
HDAC9-228ENST00000524023 ETV2O00321 342 aaPredicted RBP9.85□□□□□ -0.83
HDAC9-228ENST00000524023 CCSO14618 274 aa9.85□□□□□ -0.83
HDAC9-228ENST00000524023 HEXBP07686 556 aa9.85□□□□□ -0.83
HDAC9-228ENST00000524023 SLC25A4P12235 298 aa9.85□□□□□ -0.83
HDAC9-228ENST00000524023 CD96P40200 585 aa9.85□□□□□ -0.83
HDAC9-228ENST00000524023 CLDN6P56747 220 aa9.85□□□□□ -0.83
HDAC9-228ENST00000524023 ZMYND11Q15326 602 aa9.85□□□□□ -0.83
HDAC9-228ENST00000524023 SLC22A6Q4U2R8 563 aa9.85□□□□□ -0.83
HDAC9-228ENST00000524023 OR52W1Q6IF63 320 aa9.85□□□□□ -0.83
HDAC9-228ENST00000524023 LYG2Q86SG7 212 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms