RNA–Protein interactions for RNA: ENST00000523636.5

PABPC1-223, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 818 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-223ENST00000523636 TRAF2Q12933 501 aa4.43□□□□□ -1.7
PABPC1-223ENST00000523636 SERTAD2Q14140 314 aa4.43□□□□□ -1.7
PABPC1-223ENST00000523636 EFNB3Q15768 340 aa4.43□□□□□ -1.7
PABPC1-223ENST00000523636 YIF1BQ5BJH7 314 aa4.43□□□□□ -1.7
PABPC1-223ENST00000523636 RNASE12Q5GAN4 147 aaKnown RBP4.43□□□□□ -1.7
PABPC1-223ENST00000523636 ARL13AQ5H913 290 aaPredicted RBP4.43□□□□□ -1.7
PABPC1-223ENST00000523636 ACER2Q5QJU3 275 aa4.43□□□□□ -1.7
PABPC1-223ENST00000523636 FAM72AQ5TYM5 149 aa4.43□□□□□ -1.7
PABPC1-223ENST00000523636 OR52W1Q6IF63 320 aa4.43□□□□□ -1.7
PABPC1-223ENST00000523636 FAM72DQ6L9T8 149 aa4.43□□□□□ -1.7
PABPC1-223ENST00000523636 PRMT9Q6P2P2 845 aa4.43□□□□□ -1.7
PABPC1-223ENST00000523636 UQCC3Q6UW78 93 aa4.43□□□□□ -1.7
PABPC1-223ENST00000523636 IZUMO2Q6UXV1 221 aa4.43□□□□□ -1.7
PABPC1-223ENST00000523636 MRPL21Q7Z2W9 205 aaKnown RBP4.43□□□□□ -1.7
PABPC1-223ENST00000523636 CMC1Q7Z7K0 106 aa4.43□□□□□ -1.7
PABPC1-223ENST00000523636 DHDDSQ86SQ9 333 aa4.43□□□□□ -1.7
PABPC1-223ENST00000523636 ZNF546Q86UE3 836 aa4.43□□□□□ -1.7
PABPC1-223ENST00000523636 FAM72BQ86X60 149 aa4.43□□□□□ -1.7
PABPC1-223ENST00000523636 ZNF547Q8IVP9 402 aa4.43□□□□□ -1.7
PABPC1-223ENST00000523636 GID4Q8IVV7 300 aa4.43□□□□□ -1.7
PABPC1-223ENST00000523636 BOD1L2Q8IYS8 172 aa4.43□□□□□ -1.7
PABPC1-223ENST00000523636 PGAM4Q8N0Y7 254 aa4.43□□□□□ -1.7
PABPC1-223ENST00000523636 UMODL1-AS1Q8N2C9 162 aa4.43□□□□□ -1.7
PABPC1-223ENST00000523636 SYT14Q8NB59 555 aa4.43□□□□□ -1.7
PABPC1-223ENST00000523636 OR2AJ1Q8NGZ0 328 aa4.43□□□□□ -1.7
PABPC1-223ENST00000523636 C16orf52Q8NHV5 167 aa4.43□□□□□ -1.7
PABPC1-223ENST00000523636 IMMP1LQ96LU5 166 aa4.43□□□□□ -1.7
PABPC1-223ENST00000523636 SNX18Q96RF0 628 aa4.43□□□□□ -1.7
PABPC1-223ENST00000523636 SLC30A2Q9BRI3 323 aa4.43□□□□□ -1.7
PABPC1-223ENST00000523636 LMF2Q9BU23 707 aaKnown RBP4.43□□□□□ -1.7
PABPC1-223ENST00000523636 RBM24Q9BX46 236 aaKnown RBP4.43□□□□□ -1.7
PABPC1-223ENST00000523636 ZYG11BQ9C0D3 744 aa4.43□□□□□ -1.7
PABPC1-223ENST00000523636 C19orf12Q9NSK7 152 aa4.43□□□□□ -1.7
PABPC1-223ENST00000523636 ARL15Q9NXU5 204 aa4.43□□□□□ -1.7
PABPC1-223ENST00000523636 CYB5R1Q9UHQ9 305 aa4.43□□□□□ -1.7
PABPC1-223ENST00000523636 FBXO5Q9UKT4 447 aa4.43□□□□□ -1.7
PABPC1-223ENST00000523636 ZNF346Q9UL40 294 aaKnown RBP4.43□□□□□ -1.7
PABPC1-223ENST00000523636 RAB26Q9ULW5 256 aa4.43□□□□□ -1.7
PABPC1-223ENST00000523636 POMPQ9Y244 141 aa4.43□□□□□ -1.7
PABPC1-223ENST00000523636 ERGIC3Q9Y282 383 aa4.43□□□□□ -1.7
PABPC1-223ENST00000523636 V9GYQ6 96 aa4.43□□□□□ -1.7
PABPC1-223ENST00000523636 DNAH2Q9P225 4427 aa4.42□□□□□ -1.7
PABPC1-223ENST00000523636 A0A0J9YVX5 310 aa4.42□□□□□ -1.7
PABPC1-223ENST00000523636 TRBV11-1A0A0K0K1C0 115 aa4.42□□□□□ -1.7
PABPC1-223ENST00000523636 RBMY1BA6NDE4 496 aaKnown RBP4.42□□□□□ -1.7
PABPC1-223ENST00000523636 RBMY1EA6NEQ0 496 aaKnown RBP4.42□□□□□ -1.7
PABPC1-223ENST00000523636 HSPB2A8KAH6 182 aa4.42□□□□□ -1.7
PABPC1-223ENST00000523636 TMEM238C9JI98 176 aa4.42□□□□□ -1.7
PABPC1-223ENST00000523636 E9PQ18 207 aa4.42□□□□□ -1.7
PABPC1-223ENST00000523636 PSMD12O00232 456 aaPredicted RBP4.42□□□□□ -1.7
PABPC1-223ENST00000523636 FBP2O00757 339 aa4.42□□□□□ -1.7
PABPC1-223ENST00000523636 VCYO14598 125 aa4.42□□□□□ -1.7
PABPC1-223ENST00000523636 TFECO14948 347 aaPredicted RBP4.42□□□□□ -1.7
PABPC1-223ENST00000523636 RAB29O14966 203 aa4.42□□□□□ -1.7
PABPC1-223ENST00000523636 UBDO15205 165 aa4.42□□□□□ -1.7
PABPC1-223ENST00000523636 PLPP2O43688 288 aa4.42□□□□□ -1.7
PABPC1-223ENST00000523636 OR2B3O76000 313 aa4.42□□□□□ -1.7
PABPC1-223ENST00000523636 PLAUP00749 431 aa4.42□□□□□ -1.7
PABPC1-223ENST00000523636 FSHBP01225 129 aa4.42□□□□□ -1.7
PABPC1-223ENST00000523636 F7P08709 466 aaPredicted RBP4.42□□□□□ -1.7
PABPC1-223ENST00000523636 RBMY1DP0C7P1 496 aaKnown RBP4.42□□□□□ -1.7
PABPC1-223ENST00000523636 IMPDH1P20839 514 aa4.42□□□□□ -1.7
PABPC1-223ENST00000523636 HLA-DMAP28067 261 aa4.42□□□□□ -1.7
PABPC1-223ENST00000523636 NDUFS1P28331 727 aa4.42□□□□□ -1.7
PABPC1-223ENST00000523636 PPP2R1BP30154 601 aa4.42□□□□□ -1.7
PABPC1-223ENST00000523636 BDKRB2P30411 391 aa4.42□□□□□ -1.7
PABPC1-223ENST00000523636 CEACAM8P31997 349 aaPredicted RBP4.42□□□□□ -1.7
PABPC1-223ENST00000523636 CFHR2P36980 270 aa4.42□□□□□ -1.7
PABPC1-223ENST00000523636 NUDT2P50583 147 aa4.42□□□□□ -1.7
PABPC1-223ENST00000523636 ATP4BP51164 291 aa4.42□□□□□ -1.7
PABPC1-223ENST00000523636 MAPK12P53778 367 aa4.42□□□□□ -1.7
PABPC1-223ENST00000523636 SPCS3P61009 180 aa4.42□□□□□ -1.7
PABPC1-223ENST00000523636 HERV-K104P63124 156 aa4.42□□□□□ -1.7
PABPC1-223ENST00000523636 RAE1P78406 368 aaKnown RBP4.42□□□□□ -1.7
PABPC1-223ENST00000523636 HOXA4Q00056 320 aaPredicted RBP4.42□□□□□ -1.7
PABPC1-223ENST00000523636 RELAQ04206 551 aa4.42□□□□□ -1.7
PABPC1-223ENST00000523636 LOXL1Q08397 574 aaPredicted RBP4.42□□□□□ -1.7
PABPC1-223ENST00000523636 FLOT2Q14254 428 aa4.42□□□□□ -1.7
PABPC1-223ENST00000523636 MELKQ14680 651 aa4.42□□□□□ -1.7
PABPC1-223ENST00000523636 POU6F1Q14863 301 aa4.42□□□□□ -1.7
PABPC1-223ENST00000523636 HSPB2Q16082 182 aa4.42□□□□□ -1.7
PABPC1-223ENST00000523636 MRPL23Q16540 153 aaKnown RBP4.42□□□□□ -1.7
PABPC1-223ENST00000523636 SAMD4BQ5PRF9 694 aaKnown RBP4.42□□□□□ -1.7
PABPC1-223ENST00000523636 CYB5R2Q6BCY4 276 aa4.42□□□□□ -1.7
PABPC1-223ENST00000523636 ZNF770Q6IQ21 691 aaPredicted RBP4.42□□□□□ -1.7
PABPC1-223ENST00000523636 FAM166AQ6J272 317 aa4.42□□□□□ -1.7
PABPC1-223ENST00000523636 CAPN13Q6MZZ7 669 aaPredicted RBP4.42□□□□□ -1.7
PABPC1-223ENST00000523636 FAM45BPQ6NSW5 357 aa4.42□□□□□ -1.7
PABPC1-223ENST00000523636 UGT3A1Q6NUS8 523 aa4.42□□□□□ -1.7
PABPC1-223ENST00000523636 LINC00518Q8N0U6 118 aa4.42□□□□□ -1.7
PABPC1-223ENST00000523636 TMEM178AQ8NBL3 297 aa4.42□□□□□ -1.7
PABPC1-223ENST00000523636 SLC16A11Q8NCK7 471 aa4.42□□□□□ -1.7
PABPC1-223ENST00000523636 SDR9C7Q8NEX9 313 aa4.42□□□□□ -1.7
PABPC1-223ENST00000523636 LHFPL5Q8TAF8 219 aa4.42□□□□□ -1.7
PABPC1-223ENST00000523636 FAM45AQ8TCE6 357 aa4.42□□□□□ -1.7
PABPC1-223ENST00000523636 TMEM170AQ8WVE7 144 aa4.42□□□□□ -1.7
PABPC1-223ENST00000523636 ACOT11Q8WXI4 607 aaPredicted RBP4.42□□□□□ -1.7
PABPC1-223ENST00000523636 PINX1Q96BK5 328 aaKnown RBP4.42□□□□□ -1.7
PABPC1-223ENST00000523636 SARAFQ96BY9 339 aa4.42□□□□□ -1.7
PABPC1-223ENST00000523636 ROPN1LQ96C74 230 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms