RNA–Protein interactions for RNA: ENST00000518824.5

VEGFA-219, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-219ENST00000518824 FMO3P31513 532 aa11.29□□□□□ -0.6
VEGFA-219ENST00000518824 GPR6P46095 362 aaPredicted RBP11.29□□□□□ -0.6
VEGFA-219ENST00000518824 ENTPD1P49961 510 aa11.29□□□□□ -0.6
VEGFA-219ENST00000518824 PPP2R2BQ00005 443 aa11.29□□□□□ -0.6
VEGFA-219ENST00000518824 CDK5R2Q13319 367 aa11.29□□□□□ -0.6
VEGFA-219ENST00000518824 ATP6AP1Q15904 470 aa11.29□□□□□ -0.6
VEGFA-219ENST00000518824 PCK2Q16822 640 aa11.29□□□□□ -0.6
VEGFA-219ENST00000518824 SNAI3Q3KNW1 292 aa11.29□□□□□ -0.6
VEGFA-219ENST00000518824 CYB5R2Q6BCY4 276 aa11.29□□□□□ -0.6
VEGFA-219ENST00000518824 SLC27A4Q6P1M0 643 aa11.29□□□□□ -0.6
VEGFA-219ENST00000518824 PLBD1Q6P4A8 553 aa11.29□□□□□ -0.6
VEGFA-219ENST00000518824 FAHD1Q6P587 224 aa11.29□□□□□ -0.6
VEGFA-219ENST00000518824 ARL9Q6T311 187 aa11.29□□□□□ -0.6
VEGFA-219ENST00000518824 ATG16L2Q8NAA4 619 aa11.29□□□□□ -0.6
VEGFA-219ENST00000518824 OR5K1Q8NHB7 308 aa11.29□□□□□ -0.6
VEGFA-219ENST00000518824 CLDND2Q8NHS1 167 aa11.29□□□□□ -0.6
VEGFA-219ENST00000518824 ZMYND19Q96E35 227 aaPredicted RBP11.29□□□□□ -0.6
VEGFA-219ENST00000518824 ATF6BQ99941 703 aa11.29□□□□□ -0.6
VEGFA-219ENST00000518824 C1QTNF5Q9BXJ0 243 aa11.29□□□□□ -0.6
VEGFA-219ENST00000518824 OR51V1Q9H2C8 321 aa11.29□□□□□ -0.6
VEGFA-219ENST00000518824 YY1AP1Q9H869 796 aa11.29□□□□□ -0.6
VEGFA-219ENST00000518824 ATPIF1Q9UII2 106 aa11.29□□□□□ -0.6
VEGFA-219ENST00000518824 GPR160Q9UJ42 338 aa11.29□□□□□ -0.6
VEGFA-219ENST00000518824 KCNG2Q9UJ96 466 aa11.29□□□□□ -0.6
VEGFA-219ENST00000518824 DYSFO75923 2080 aa11.28□□□□□ -0.6
VEGFA-219ENST00000518824 IGHV1-69-2A0A0G2JMI3 117 aa11.28□□□□□ -0.6
VEGFA-219ENST00000518824 KIAA1324LA8MWY0 1029 aaPredicted RBP11.28□□□□□ -0.6
VEGFA-219ENST00000518824 H3BSA7 217 aa11.28□□□□□ -0.6
VEGFA-219ENST00000518824 SELENOFO60613 162 aa11.28□□□□□ -0.6
VEGFA-219ENST00000518824 DEAF1O75398 565 aaPredicted RBP11.28□□□□□ -0.6
VEGFA-219ENST00000518824 IFNGP01579 166 aa11.28□□□□□ -0.6
VEGFA-219ENST00000518824 SLC2A1P11166 492 aa11.28□□□□□ -0.6
VEGFA-219ENST00000518824 CRYBB2P43320 205 aa11.28□□□□□ -0.6
VEGFA-219ENST00000518824 MVKQ03426 396 aa11.28□□□□□ -0.6
VEGFA-219ENST00000518824 PCGF3Q3KNV8 242 aa11.28□□□□□ -0.6
VEGFA-219ENST00000518824 UNQ6126/PRO20091Q6UXV3 157 aa11.28□□□□□ -0.6
VEGFA-219ENST00000518824 FBXW12Q6X9E4 464 aa11.28□□□□□ -0.6
VEGFA-219ENST00000518824 IL17RELQ6ZVW7 336 aa11.28□□□□□ -0.6
VEGFA-219ENST00000518824 CPOQ8IVL8 374 aa11.28□□□□□ -0.6
VEGFA-219ENST00000518824 ZNF540Q8NDQ6 660 aa11.28□□□□□ -0.6
VEGFA-219ENST00000518824 ST7LQ8TDW4 575 aa11.28□□□□□ -0.6
VEGFA-219ENST00000518824 APOBEC3DQ96AK3 386 aaPredicted RBP11.28□□□□□ -0.6
VEGFA-219ENST00000518824 DUS3LQ96G46 650 aaKnown RBP11.28□□□□□ -0.6
VEGFA-219ENST00000518824 DCLRE1CQ96SD1 692 aaKnown RBP11.28□□□□□ -0.6
VEGFA-219ENST00000518824 SEMA6AQ9H2E6 1030 aa11.28□□□□□ -0.6
VEGFA-219ENST00000518824 MMADHCQ9H3L0 296 aaPredicted RBP11.28□□□□□ -0.6
VEGFA-219ENST00000518824 ZNF556Q9HAH1 456 aa11.28□□□□□ -0.6
VEGFA-219ENST00000518824 SAP30LQ9HAJ7 183 aa11.28□□□□□ -0.6
VEGFA-219ENST00000518824 SLC25A19Q9HC21 320 aa11.28□□□□□ -0.6
VEGFA-219ENST00000518824 CENPMQ9NSP4 180 aa11.28□□□□□ -0.6
VEGFA-219ENST00000518824 DECR2Q9NUI1 292 aa11.28□□□□□ -0.6
VEGFA-219ENST00000518824 DDX28Q9NUL7 540 aaKnown RBP11.28□□□□□ -0.6
VEGFA-219ENST00000518824 AP4S1Q9Y587 144 aa11.28□□□□□ -0.6
VEGFA-219ENST00000518824 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.27□□□□□ -0.62e-8■■■□□ 14.7
VEGFA-219ENST00000518824 IGHV3-64DA0A0J9YX35 117 aa11.27□□□□□ -0.61
VEGFA-219ENST00000518824 LOC100289279A0A1B0GTE1 492 aa11.27□□□□□ -0.61
VEGFA-219ENST00000518824 PLSCR5A0PG75 271 aa11.27□□□□□ -0.61
VEGFA-219ENST00000518824 FAM157AC9JC47 383 aa11.27□□□□□ -0.61
VEGFA-219ENST00000518824 M0R135 149 aa11.27□□□□□ -0.61
VEGFA-219ENST00000518824 MLNRO43193 412 aa11.27□□□□□ -0.61
VEGFA-219ENST00000518824 GLCEO94923 617 aa11.27□□□□□ -0.61
VEGFA-219ENST00000518824 LCATP04180 440 aa11.27□□□□□ -0.61
VEGFA-219ENST00000518824 ADH4P08319 380 aa11.27□□□□□ -0.61
VEGFA-219ENST00000518824 RAC2P15153 192 aa11.27□□□□□ -0.61
VEGFA-219ENST00000518824 SELEP16581 610 aa11.27□□□□□ -0.61
VEGFA-219ENST00000518824 HOXB6P17509 224 aaKnown RBP11.27□□□□□ -0.61
VEGFA-219ENST00000518824 IGFBP5P24593 272 aa11.27□□□□□ -0.61
VEGFA-219ENST00000518824 GSTT1P30711 240 aa11.27□□□□□ -0.61
VEGFA-219ENST00000518824 OTX1P32242 354 aaPredicted RBP11.27□□□□□ -0.61
VEGFA-219ENST00000518824 GZMKP49863 264 aa11.27□□□□□ -0.61
VEGFA-219ENST00000518824 PRKXP51817 358 aa11.27□□□□□ -0.61
VEGFA-219ENST00000518824 CHN2P52757 468 aa11.27□□□□□ -0.61
VEGFA-219ENST00000518824 HCCSP53701 268 aa11.27□□□□□ -0.61
VEGFA-219ENST00000518824 CRISP1P54107 249 aa11.27□□□□□ -0.61
VEGFA-219ENST00000518824 MRPS11P82912 194 aaKnown RBP11.27□□□□□ -0.61
VEGFA-219ENST00000518824 TNFAIP6P98066 277 aaPredicted RBP11.27□□□□□ -0.61
VEGFA-219ENST00000518824 GK2Q14410 553 aaPredicted RBP11.27□□□□□ -0.61
VEGFA-219ENST00000518824 MOGQ16653 247 aa11.27□□□□□ -0.61
VEGFA-219ENST00000518824 FAM209AQ5JX71 171 aa11.27□□□□□ -0.61
VEGFA-219ENST00000518824 ZNF771Q7L3S4 317 aaPredicted RBP11.27□□□□□ -0.61
VEGFA-219ENST00000518824 DPY19L4Q7Z388 723 aa11.27□□□□□ -0.61
VEGFA-219ENST00000518824 BCDIN3DQ7Z5W3 292 aaKnown RBP11.27□□□□□ -0.61
VEGFA-219ENST00000518824 ERI1Q8IV48 349 aaKnown RBP11.27□□□□□ -0.61
VEGFA-219ENST00000518824 TIGD4Q8IY51 512 aa11.27□□□□□ -0.61
VEGFA-219ENST00000518824 C1orf174Q8IYL3 243 aa11.27□□□□□ -0.61
VEGFA-219ENST00000518824 BHLHE23Q8NDY6 225 aa11.27□□□□□ -0.61
VEGFA-219ENST00000518824 OR2Z1Q8NG97 314 aa11.27□□□□□ -0.61
VEGFA-219ENST00000518824 OR10AD1Q8NGE0 317 aa11.27□□□□□ -0.61
VEGFA-219ENST00000518824 OR6N2Q8NGY6 317 aa11.27□□□□□ -0.61
VEGFA-219ENST00000518824 OR2AE1Q8NHA4 323 aa11.27□□□□□ -0.61
VEGFA-219ENST00000518824 ITLN1Q8WWA0 313 aa11.27□□□□□ -0.61
VEGFA-219ENST00000518824 PYDC1Q8WXC3 89 aa11.27□□□□□ -0.61
VEGFA-219ENST00000518824 CCL17Q92583 94 aa11.27□□□□□ -0.61
VEGFA-219ENST00000518824 SLAMF6Q96DU3 332 aa11.27□□□□□ -0.61
VEGFA-219ENST00000518824 NRBF2Q96F24 287 aa11.27□□□□□ -0.61
VEGFA-219ENST00000518824 ZNF799Q96GE5 643 aa11.27□□□□□ -0.61
VEGFA-219ENST00000518824 MARCH7Q9H992 704 aa11.27□□□□□ -0.61
VEGFA-219ENST00000518824 PAPOLBQ9NRJ5 636 aaKnown RBP11.27□□□□□ -0.61
VEGFA-219ENST00000518824 KLHDC2Q9Y2U9 406 aa11.27□□□□□ -0.61
VEGFA-219ENST00000518824 CUBNO60494 3623 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms