RNA–Protein interactions for RNA: ENST00000517417.2

PCDHGA1-202, Transcript of protocadherin gamma subfamily A, 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHGA1, Length 4,604 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1-202ENST00000517417 TCRBV16S1A1N1A0A5B0 115 aa9.8□□□□□ -0.84
PCDHGA1-202ENST00000517417 CCSO14618 274 aa9.8□□□□□ -0.84
PCDHGA1-202ENST00000517417 OR2J2O76002 312 aa9.8□□□□□ -0.84
PCDHGA1-202ENST00000517417 IL5P05113 134 aa9.8□□□□□ -0.84
PCDHGA1-202ENST00000517417 GUSBP08236 651 aa9.8□□□□□ -0.84
PCDHGA1-202ENST00000517417 OMGP23515 440 aa9.8□□□□□ -0.84
PCDHGA1-202ENST00000517417 GABRA2P47869 451 aa9.8□□□□□ -0.84
PCDHGA1-202ENST00000517417 FAM53BQ14153 422 aa9.8□□□□□ -0.84
PCDHGA1-202ENST00000517417 CLVS2Q5SYC1 327 aa9.8□□□□□ -0.84
PCDHGA1-202ENST00000517417 IFI44Q8TCB0 444 aa9.8□□□□□ -0.84
PCDHGA1-202ENST00000517417 SECTM1Q8WVN6 248 aa9.8□□□□□ -0.84
PCDHGA1-202ENST00000517417 NKX6-2Q9C056 277 aaPredicted RBP9.8□□□□□ -0.84
PCDHGA1-202ENST00000517417 CACNA1GO43497 2377 aa9.8□□□□□ -0.84
PCDHGA1-202ENST00000517417 CASP8AP2Q9UKL3 1982 aa9.8□□□□□ -0.84
PCDHGA1-202ENST00000517417 CD300LBA8K4G0 201 aa9.8□□□□□ -0.84
PCDHGA1-202ENST00000517417 LMO7DNF2Z398 122 aa9.8□□□□□ -0.84
PCDHGA1-202ENST00000517417 PMS2P2O95744 297 aa9.8□□□□□ -0.84
PCDHGA1-202ENST00000517417 ZGLP1P0C6A0 271 aa9.8□□□□□ -0.84
PCDHGA1-202ENST00000517417 GLB1P16278 677 aa9.8□□□□□ -0.84
PCDHGA1-202ENST00000517417 ACHEP22303 614 aa9.8□□□□□ -0.84
PCDHGA1-202ENST00000517417 SDHAP31040 664 aa9.8□□□□□ -0.84
PCDHGA1-202ENST00000517417 RFC3P40938 356 aa9.8□□□□□ -0.84
PCDHGA1-202ENST00000517417 GLIPR1L1Q6UWM5 242 aa9.8□□□□□ -0.84
PCDHGA1-202ENST00000517417 LHFPL5Q8TAF8 219 aa9.8□□□□□ -0.84
PCDHGA1-202ENST00000517417 ZDHHC19Q8WVZ1 309 aaPredicted RBP9.8□□□□□ -0.84
PCDHGA1-202ENST00000517417 FBXW5Q969U6 566 aa9.8□□□□□ -0.84
PCDHGA1-202ENST00000517417 THOC3Q96J01 351 aaKnown RBP9.8□□□□□ -0.84
PCDHGA1-202ENST00000517417 TMEM68Q96MH6 324 aa9.8□□□□□ -0.84
PCDHGA1-202ENST00000517417 SOSTQ9BQB4 213 aa9.8□□□□□ -0.84
PCDHGA1-202ENST00000517417 TIMM8BQ9Y5J9 83 aaPredicted RBP9.8□□□□□ -0.84
PCDHGA1-202ENST00000517417 A0A087WV62 115 aa9.8□□□□□ -0.84
PCDHGA1-202ENST00000517417 METTL12A8MUP2 240 aa9.8□□□□□ -0.84
PCDHGA1-202ENST00000517417 LPLP06858 475 aa9.8□□□□□ -0.84
PCDHGA1-202ENST00000517417 GJC3Q8NFK1 279 aa9.8□□□□□ -0.84
PCDHGA1-202ENST00000517417 ARL5BQ96KC2 179 aa9.8□□□□□ -0.84
PCDHGA1-202ENST00000517417 CMTM3Q96MX0 182 aa9.8□□□□□ -0.84
PCDHGA1-202ENST00000517417 PBDC1Q9BVG4 233 aa9.8□□□□□ -0.84
PCDHGA1-202ENST00000517417 TWSG1Q9GZX9 223 aa9.8□□□□□ -0.84
PCDHGA1-202ENST00000517417 HRH4Q9H3N8 390 aa9.8□□□□□ -0.84
PCDHGA1-202ENST00000517417 ZFP57Q9NU63 452 aa9.8□□□□□ -0.84
PCDHGA1-202ENST00000517417 SLC5A6Q9Y289 635 aa9.8□□□□□ -0.84
PCDHGA1-202ENST00000517417 PTPRDP23468 1912 aa9.8□□□□□ -0.84
PCDHGA1-202ENST00000517417 H0YIG0 161 aa9.79□□□□□ -0.84
PCDHGA1-202ENST00000517417 CD3DP04234 171 aa9.79□□□□□ -0.84
PCDHGA1-202ENST00000517417 GUCA2AQ02747 115 aa9.79□□□□□ -0.84
PCDHGA1-202ENST00000517417 AKR1C1Q04828 323 aa9.79□□□□□ -0.84
PCDHGA1-202ENST00000517417 ZIC1Q15915 447 aa9.79□□□□□ -0.84
PCDHGA1-202ENST00000517417 ZNF626Q68DY1 528 aa9.79□□□□□ -0.84
PCDHGA1-202ENST00000517417 FCRL6Q6DN72 434 aa9.79□□□□□ -0.84
PCDHGA1-202ENST00000517417 TMEM92Q6UXU6 159 aa9.79□□□□□ -0.84
PCDHGA1-202ENST00000517417 OR2L13Q8N349 312 aa9.79□□□□□ -0.84
PCDHGA1-202ENST00000517417 MARVELD3Q96A59 401 aa9.79□□□□□ -0.84
PCDHGA1-202ENST00000517417 WDR89Q96FK6 387 aaPredicted RBP9.79□□□□□ -0.84
PCDHGA1-202ENST00000517417 CA10Q9NS85 328 aa9.79□□□□□ -0.84
PCDHGA1-202ENST00000517417 OR5V1Q9UGF6 321 aa9.79□□□□□ -0.84
PCDHGA1-202ENST00000517417 SLC22A13Q9Y226 551 aa9.79□□□□□ -0.84
PCDHGA1-202ENST00000517417 CTDSPLO15194 276 aa9.79□□□□□ -0.84
PCDHGA1-202ENST00000517417 EPPINO95925 133 aa9.79□□□□□ -0.84
PCDHGA1-202ENST00000517417 QDPRP09417 244 aa9.79□□□□□ -0.84
PCDHGA1-202ENST00000517417 SPTBP11277 2137 aa9.79□□□□□ -0.84
PCDHGA1-202ENST00000517417 APOBEC1P41238 236 aaKnown RBP9.79□□□□□ -0.84
PCDHGA1-202ENST00000517417 LIMK1P53667 647 aa9.79□□□□□ -0.84
PCDHGA1-202ENST00000517417 MAMSTRQ6ZN01 415 aa9.79□□□□□ -0.84
PCDHGA1-202ENST00000517417 SPEM1Q8N4L4 309 aa9.79□□□□□ -0.84
PCDHGA1-202ENST00000517417 SLAMF9Q96A28 289 aa9.79□□□□□ -0.84
PCDHGA1-202ENST00000517417 SDSLQ96GA7 329 aa9.79□□□□□ -0.84
PCDHGA1-202ENST00000517417 SLC25A32Q9H2D1 315 aa9.79□□□□□ -0.84
PCDHGA1-202ENST00000517417 TET1Q8NFU7 2136 aa9.79□□□□□ -0.84
PCDHGA1-202ENST00000517417 CENPVL1A0A0U1RR11 272 aa9.79□□□□□ -0.84
PCDHGA1-202ENST00000517417 LOC107986453A0A1B0GWG9 222 aa9.79□□□□□ -0.84
PCDHGA1-202ENST00000517417 PMP2P02689 132 aa9.79□□□□□ -0.84
PCDHGA1-202ENST00000517417 TPT1P13693 172 aaKnown RBP9.79□□□□□ -0.84
PCDHGA1-202ENST00000517417 OR10K2Q6IF99 312 aa9.79□□□□□ -0.84
PCDHGA1-202ENST00000517417 MRGPREQ86SM8 312 aa9.79□□□□□ -0.84
PCDHGA1-202ENST00000517417 OR51E1Q8TCB6 317 aa9.79□□□□□ -0.84
PCDHGA1-202ENST00000517417 LIPHQ8WWY8 451 aa9.79□□□□□ -0.84
PCDHGA1-202ENST00000517417 MUCL1Q96DR8 90 aa9.79□□□□□ -0.84
PCDHGA1-202ENST00000517417 ZNF286AQ9HBT8 521 aa9.79□□□□□ -0.84
PCDHGA1-202ENST00000517417 ZNF223Q9UK11 482 aaPredicted RBP9.79□□□□□ -0.84
PCDHGA1-202ENST00000517417 TP53TG5Q9Y2B4 290 aa9.79□□□□□ -0.84
PCDHGA1-202ENST00000517417 LOC100289279A0A1B0GTE1 492 aa9.79□□□□□ -0.84
PCDHGA1-202ENST00000517417 ZFPL1O95159 310 aa9.79□□□□□ -0.84
PCDHGA1-202ENST00000517417 NPY4RP50391 375 aa9.79□□□□□ -0.84
PCDHGA1-202ENST00000517417 RAB5BP61020 215 aa9.79□□□□□ -0.84
PCDHGA1-202ENST00000517417 PMPCAQ10713 525 aa9.79□□□□□ -0.84
PCDHGA1-202ENST00000517417 TUSC1Q2TAM9 212 aa9.79□□□□□ -0.84
PCDHGA1-202ENST00000517417 MRM1Q6IN84 353 aaKnown RBP9.79□□□□□ -0.84
PCDHGA1-202ENST00000517417 ZNF529Q6P280 563 aa9.79□□□□□ -0.84
PCDHGA1-202ENST00000517417 ETFBKMTQ8IXQ9 262 aa9.79□□□□□ -0.84
PCDHGA1-202ENST00000517417 DND1Q8IYX4 353 aaKnown RBP9.79□□□□□ -0.84
PCDHGA1-202ENST00000517417 RFLNBQ8N5W9 214 aa9.79□□□□□ -0.84
PCDHGA1-202ENST00000517417 LRFN5Q96NI6 719 aa9.79□□□□□ -0.84
PCDHGA1-202ENST00000517417 DCBLD2Q96PD2 775 aa9.79□□□□□ -0.84
PCDHGA1-202ENST00000517417 CTSFQ9UBX1 484 aa9.79□□□□□ -0.84
PCDHGA1-202ENST00000517417 TRAPPC2LQ9UL33 140 aa9.79□□□□□ -0.84
PCDHGA1-202ENST00000517417 PCYT1BQ9Y5K3 369 aaPredicted RBP9.79□□□□□ -0.84
PCDHGA1-202ENST00000517417 ANKRD20A5PA0PJZ0 165 aa9.78□□□□□ -0.84
PCDHGA1-202ENST00000517417 OTOL1A6NHN0 477 aaPredicted RBP9.78□□□□□ -0.84
PCDHGA1-202ENST00000517417 ZNF254O75437 659 aa9.78□□□□□ -0.84
PCDHGA1-202ENST00000517417 RPA2P15927 270 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms