RNA–Protein interactions for RNA: ENST00000513318.1

HMGXB3-204, Transcript of HMG-box containing 3, humanhuman

TSL 3

Gene HMGXB3, Length 749 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-204ENST00000513318 MROQ9BYG7 248 aa6.56□□□□□ -1.36
HMGXB3-204ENST00000513318 BCL2L14Q9BZR8 327 aa6.56□□□□□ -1.36
HMGXB3-204ENST00000513318 NIPAL2Q9H841 368 aa6.56□□□□□ -1.36
HMGXB3-204ENST00000513318 ELOVL3Q9HB03 270 aa6.56□□□□□ -1.36
HMGXB3-204ENST00000513318 AMBNQ9NP70 447 aa6.56□□□□□ -1.36
HMGXB3-204ENST00000513318 INPP5EQ9NRR6 644 aa6.56□□□□□ -1.36
HMGXB3-204ENST00000513318 CENPMQ9NSP4 180 aa6.56□□□□□ -1.36
HMGXB3-204ENST00000513318 PLCXD1Q9NUJ7 323 aa6.56□□□□□ -1.36
HMGXB3-204ENST00000513318 CNOT2Q9NZN8 540 aaKnown RBP6.56□□□□□ -1.36
HMGXB3-204ENST00000513318 POU2F3Q9UKI9 436 aa6.56□□□□□ -1.36
HMGXB3-204ENST00000513318 COPS3Q9UNS2 423 aa6.56□□□□□ -1.36
HMGXB3-204ENST00000513318 EXOGQ9Y2C4 368 aaKnown RBP6.56□□□□□ -1.36
HMGXB3-204ENST00000513318 KLHDC2Q9Y2U9 406 aa6.56□□□□□ -1.36
HMGXB3-204ENST00000513318 SPEF1Q9Y4P9 236 aa6.56□□□□□ -1.36
HMGXB3-204ENST00000513318 ANKRD17O75179 2603 aaKnown RBP6.56□□□□□ -1.36
HMGXB3-204ENST00000513318 DYSFO75923 2080 aa6.55□□□□□ -1.36
HMGXB3-204ENST00000513318 DAPL1A0PJW8 107 aa6.55□□□□□ -1.36
HMGXB3-204ENST00000513318 EFCAB10A6NFE3 127 aa6.55□□□□□ -1.36
HMGXB3-204ENST00000513318 F5H5K5 113 aa6.55□□□□□ -1.36
HMGXB3-204ENST00000513318 J3QRE1 110 aa6.55□□□□□ -1.36
HMGXB3-204ENST00000513318 XPNPEP2O43895 674 aa6.55□□□□□ -1.36
HMGXB3-204ENST00000513318 SMPD2O60906 423 aa6.55□□□□□ -1.36
HMGXB3-204ENST00000513318 FAM20BO75063 409 aa6.55□□□□□ -1.36
HMGXB3-204ENST00000513318 ZNF254O75437 659 aa6.55□□□□□ -1.36
HMGXB3-204ENST00000513318 ABHD16AO95870 558 aa6.55□□□□□ -1.36
HMGXB3-204ENST00000513318 KRT8P05787 483 aa6.55□□□□□ -1.36
HMGXB3-204ENST00000513318 DBHP09172 617 aa6.55□□□□□ -1.36
HMGXB3-204ENST00000513318 H2BFMP0C1H6 154 aa6.55□□□□□ -1.36
HMGXB3-204ENST00000513318 CCDC159P0C7I6 412 aa6.55□□□□□ -1.36
HMGXB3-204ENST00000513318 ACSM4P0C7M7 580 aa6.55□□□□□ -1.36
HMGXB3-204ENST00000513318 CCL2P13500 99 aa6.55□□□□□ -1.36
HMGXB3-204ENST00000513318 CCNOP22674 350 aa6.55□□□□□ -1.36
HMGXB3-204ENST00000513318 DCKP27707 260 aa6.55□□□□□ -1.36
HMGXB3-204ENST00000513318 OPRL1P41146 370 aa6.55□□□□□ -1.36
HMGXB3-204ENST00000513318 RAD52P43351 418 aa6.55□□□□□ -1.36
HMGXB3-204ENST00000513318 RIDAP52758 137 aaKnown RBP6.55□□□□□ -1.36
HMGXB3-204ENST00000513318 HCCSP53701 268 aa6.55□□□□□ -1.36
HMGXB3-204ENST00000513318 TPTEP56180 551 aa6.55□□□□□ -1.36
HMGXB3-204ENST00000513318 RPS23P62266 143 aaKnown RBP6.55□□□□□ -1.36
HMGXB3-204ENST00000513318 ACTA2P62736 377 aa6.55□□□□□ -1.36
HMGXB3-204ENST00000513318 ACTG2P63267 376 aa6.55□□□□□ -1.36
HMGXB3-204ENST00000513318 NKX6-1P78426 367 aaPredicted RBP6.55□□□□□ -1.36
HMGXB3-204ENST00000513318 ROM1Q03395 351 aa6.55□□□□□ -1.36
HMGXB3-204ENST00000513318 SNTB2Q13425 540 aaKnown RBP6.55□□□□□ -1.36
HMGXB3-204ENST00000513318 MED21Q13503 144 aa6.55□□□□□ -1.36
HMGXB3-204ENST00000513318 KRTAP27-1Q3LI81 207 aa6.55□□□□□ -1.36
HMGXB3-204ENST00000513318 C6orf141Q5SZD1 244 aa6.55□□□□□ -1.36
HMGXB3-204ENST00000513318 LAIR2Q6ISS4 152 aa6.55□□□□□ -1.36
HMGXB3-204ENST00000513318 DRAM2Q6UX65 266 aa6.55□□□□□ -1.36
HMGXB3-204ENST00000513318 LRRN1Q6UXK5 716 aa6.55□□□□□ -1.36
HMGXB3-204ENST00000513318 PLEKHG7Q6ZR37 379 aa6.55□□□□□ -1.36
HMGXB3-204ENST00000513318 AHSA2Q719I0 299 aa6.55□□□□□ -1.36
HMGXB3-204ENST00000513318 SPATC1Q76KD6 591 aa6.55□□□□□ -1.36
HMGXB3-204ENST00000513318 SSX6Q7RTT6 188 aa6.55□□□□□ -1.36
HMGXB3-204ENST00000513318 FAM220AQ7Z4H9 259 aa6.55□□□□□ -1.36
HMGXB3-204ENST00000513318 KRT77Q7Z794 578 aa6.55□□□□□ -1.36
HMGXB3-204ENST00000513318 HIST2H2ABQ8IUE6 130 aaPredicted RBP6.55□□□□□ -1.36
HMGXB3-204ENST00000513318 C1orf174Q8IYL3 243 aa6.55□□□□□ -1.36
HMGXB3-204ENST00000513318 ZNF679Q8IYX0 411 aa6.55□□□□□ -1.36
HMGXB3-204ENST00000513318 PAQR4Q8N4S7 273 aaPredicted RBP6.55□□□□□ -1.36
HMGXB3-204ENST00000513318 RFLNBQ8N5W9 214 aa6.55□□□□□ -1.36
HMGXB3-204ENST00000513318 BPIFB6Q8NFQ5 453 aa6.55□□□□□ -1.36
HMGXB3-204ENST00000513318 OR52I1Q8NGK6 324 aa6.55□□□□□ -1.36
HMGXB3-204ENST00000513318 SMAP2Q8WU79 429 aaPredicted RBP6.55□□□□□ -1.36
HMGXB3-204ENST00000513318 SLC7A6Q92536 515 aa6.55□□□□□ -1.36
HMGXB3-204ENST00000513318 C4orf45Q96LM5 186 aa6.55□□□□□ -1.36
HMGXB3-204ENST00000513318 TBX5Q99593 518 aa6.55□□□□□ -1.36
HMGXB3-204ENST00000513318 DOK1Q99704 481 aa6.55□□□□□ -1.36
HMGXB3-204ENST00000513318 JAM3Q9BX67 310 aa6.55□□□□□ -1.36
HMGXB3-204ENST00000513318 TTTY10Q9BZA0 68 aa6.55□□□□□ -1.36
HMGXB3-204ENST00000513318 CLEC4MQ9H2X3 399 aaPredicted RBP6.55□□□□□ -1.36
HMGXB3-204ENST00000513318 ZNF442Q9H7R0 627 aa6.55□□□□□ -1.36
HMGXB3-204ENST00000513318 FGF20Q9NP95 211 aaPredicted RBP6.55□□□□□ -1.36
HMGXB3-204ENST00000513318 TBCCD1Q9NVR7 557 aa6.55□□□□□ -1.36
HMGXB3-204ENST00000513318 SCN3BQ9NY72 215 aa6.55□□□□□ -1.36
HMGXB3-204ENST00000513318 EIF3KQ9UBQ5 218 aaKnown RBP6.55□□□□□ -1.36
HMGXB3-204ENST00000513318 IKZF2Q9UKS7 526 aa6.55□□□□□ -1.36
HMGXB3-204ENST00000513318 BLOC1S6Q9UL45 172 aa6.55□□□□□ -1.36
HMGXB3-204ENST00000513318 MYRFQ9Y2G1 1151 aa6.55□□□□□ -1.36
HMGXB3-204ENST00000513318 GRIP1Q9Y3R0 1128 aa6.55□□□□□ -1.36
HMGXB3-204ENST00000513318 LRP12Q9Y561 859 aa6.55□□□□□ -1.36
HMGXB3-204ENST00000513318 SPG11Q96JI7 2443 aa6.55□□□□□ -1.36
HMGXB3-204ENST00000513318 USF3Q68DE3 2245 aa6.54□□□□□ -1.36
HMGXB3-204ENST00000513318 DOCK11Q5JSL3 2073 aa6.54□□□□□ -1.36
HMGXB3-204ENST00000513318 NBPF19A0A087WUL8 3843 aa6.54□□□□□ -1.36
HMGXB3-204ENST00000513318 A0A1W2PPR1 153 aa6.54□□□□□ -1.36
HMGXB3-204ENST00000513318 A0A1W2PQL4 384 aaPredicted RBP6.54□□□□□ -1.36
HMGXB3-204ENST00000513318 ADARB2-AS1A8MUL3 147 aa6.54□□□□□ -1.36
HMGXB3-204ENST00000513318 HS3ST1O14792 307 aa6.54□□□□□ -1.36
HMGXB3-204ENST00000513318 SULT1C4O75897 302 aa6.54□□□□□ -1.36
HMGXB3-204ENST00000513318 PLAUP00749 431 aa6.54□□□□□ -1.36
HMGXB3-204ENST00000513318 HOXB4P17483 251 aaPredicted RBP6.54□□□□□ -1.36
HMGXB3-204ENST00000513318 MYL12AP19105 171 aa6.54□□□□□ -1.36
HMGXB3-204ENST00000513318 NR4A1P22736 598 aa6.54□□□□□ -1.36
HMGXB3-204ENST00000513318 TUBG1P23258 451 aa6.54□□□□□ -1.36
HMGXB3-204ENST00000513318 DCTDP32321 178 aa6.54□□□□□ -1.36
HMGXB3-204ENST00000513318 GLRXP35754 106 aa6.54□□□□□ -1.36
HMGXB3-204ENST00000513318 WNT5AP41221 380 aa6.54□□□□□ -1.36
HMGXB3-204ENST00000513318 SLC6A9P48067 706 aa6.54□□□□□ -1.36
HMGXB3-204ENST00000513318 CX3CR1P49238 355 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms