RNA–Protein interactions for RNA: ENST00000512876.5

MATR3-220, Transcript of matrin 3, humanhuman

TSL 3

Gene MATR3, Length 575 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-220ENST00000512876 RENP00797 406 aa14.11□□□□□ -0.15
MATR3-220ENST00000512876 FABP3P05413 133 aa14.11□□□□□ -0.15
MATR3-220ENST00000512876 ZNF12P17014 697 aa14.11□□□□□ -0.15
MATR3-220ENST00000512876 RRM2P31350 389 aa14.11□□□□□ -0.15
MATR3-220ENST00000512876 MSX2P35548 267 aaPredicted RBP14.11□□□□□ -0.15
MATR3-220ENST00000512876 GGT2P36268 569 aa14.11□□□□□ -0.15
MATR3-220ENST00000512876 MDH2P40926 338 aaKnown RBP14.11□□□□□ -0.15
MATR3-220ENST00000512876 SLC27A4Q6P1M0 643 aa14.11□□□□□ -0.15
MATR3-220ENST00000512876 C12orf54Q6X4T0 127 aa14.11□□□□□ -0.15
MATR3-220ENST00000512876 ZSCAN2Q7Z7L9 614 aaPredicted RBP14.11□□□□□ -0.15
MATR3-220ENST00000512876 OR13G1Q8NGZ3 307 aa14.11□□□□□ -0.15
MATR3-220ENST00000512876 POP5Q969H6 163 aaKnown RBP14.11□□□□□ -0.15
MATR3-220ENST00000512876 MCUR1Q96AQ8 359 aa14.11□□□□□ -0.15
MATR3-220ENST00000512876 RBM4Q9BWF3 364 aaKnown RBP14.11□□□□□ -0.15
MATR3-220ENST00000512876 PNRC2Q9NPJ4 139 aaKnown RBP14.11□□□□□ -0.15
MATR3-220ENST00000512876 ESM1Q9NQ30 184 aa14.11□□□□□ -0.15
MATR3-220ENST00000512876 RPRD1BQ9NQG5 326 aaKnown RBP14.11□□□□□ -0.15
MATR3-220ENST00000512876 CYB5R1Q9UHQ9 305 aa14.11□□□□□ -0.15
MATR3-220ENST00000512876 CEACAM18A8MTB9 384 aa14.1□□□□□ -0.15
MATR3-220ENST00000512876 TRAPPC2LH3BP13 241 aa14.1□□□□□ -0.15
MATR3-220ENST00000512876 FSTL3O95633 263 aa14.1□□□□□ -0.15
MATR3-220ENST00000512876 ACSM4P0C7M7 580 aa14.1□□□□□ -0.15
MATR3-220ENST00000512876 CFPP27918 469 aa14.1□□□□□ -0.15
MATR3-220ENST00000512876 IFNGR2P38484 337 aa14.1□□□□□ -0.15
MATR3-220ENST00000512876 CENPAP49450 140 aa14.1□□□□□ -0.15
MATR3-220ENST00000512876 TSPAN31Q12999 210 aa14.1□□□□□ -0.15
MATR3-220ENST00000512876 ZNF181Q2M3W8 571 aa14.1□□□□□ -0.15
MATR3-220ENST00000512876 SPATS1Q496A3 300 aa14.1□□□□□ -0.15
MATR3-220ENST00000512876 PGBD2Q6P3X8 592 aa14.1□□□□□ -0.15
MATR3-220ENST00000512876 LINC00346Q8IVM7 164 aa14.1□□□□□ -0.15
MATR3-220ENST00000512876 MUC20Q8N307 709 aaPredicted RBP14.1□□□□□ -0.15
MATR3-220ENST00000512876 ZDHHC22Q8N966 263 aa14.1□□□□□ -0.15
MATR3-220ENST00000512876 SDR9C7Q8NEX9 313 aa14.1□□□□□ -0.15
MATR3-220ENST00000512876 ZNF582Q96NG8 517 aaPredicted RBP14.1□□□□□ -0.15
MATR3-220ENST00000512876 CDRT15Q96T59 188 aa14.1□□□□□ -0.15
MATR3-220ENST00000512876 IFT27Q9BW83 186 aa14.1□□□□□ -0.15
MATR3-220ENST00000512876 SRA1Q9HD15 236 aaKnown RBP14.1□□□□□ -0.15
MATR3-220ENST00000512876 ARL8BQ9NVJ2 186 aa14.1□□□□□ -0.15
MATR3-220ENST00000512876 TAGLN3Q9UI15 199 aa14.1□□□□□ -0.15
MATR3-220ENST00000512876 INSIG2Q9Y5U4 225 aa14.1□□□□□ -0.15
MATR3-220ENST00000512876 H0YL77 283 aa14.09□□□□□ -0.15
MATR3-220ENST00000512876 CPT2P23786 658 aa14.09□□□□□ -0.15
MATR3-220ENST00000512876 HMGA2P52926 109 aa14.09□□□□□ -0.15
MATR3-220ENST00000512876 ACTG1P63261 375 aa14.09□□□□□ -0.15
MATR3-220ENST00000512876 ECH1Q13011 328 aa14.09□□□□□ -0.15
MATR3-220ENST00000512876 ZNF154Q13106 437 aa14.09□□□□□ -0.15
MATR3-220ENST00000512876 SLC36A3Q495N2 470 aa14.09□□□□□ -0.15
MATR3-220ENST00000512876 CPLX4Q7Z7G2 160 aa14.09□□□□□ -0.15
MATR3-220ENST00000512876 BPIFB2Q8N4F0 458 aa14.09□□□□□ -0.15
MATR3-220ENST00000512876 ATG16L2Q8NAA4 619 aa14.09□□□□□ -0.15
MATR3-220ENST00000512876 DDOQ99489 341 aa14.09□□□□□ -0.15
MATR3-220ENST00000512876 ATF6BQ99941 703 aa14.09□□□□□ -0.15
MATR3-220ENST00000512876 FN3KQ9H479 309 aa14.09□□□□□ -0.15
MATR3-220ENST00000512876 MRPL22Q9NWU5 206 aaKnown RBP14.09□□□□□ -0.15
MATR3-220ENST00000512876 KCNG2Q9UJ96 466 aa14.09□□□□□ -0.15
MATR3-220ENST00000512876 TMCC3Q9ULS5 477 aa14.09□□□□□ -0.15
MATR3-220ENST00000512876 LRCH1Q9Y2L9 728 aa14.09□□□□□ -0.15
MATR3-220ENST00000512876 LYVE1Q9Y5Y7 322 aa14.09□□□□□ -0.15
MATR3-220ENST00000512876 CDH10Q9Y6N8 788 aa14.09□□□□□ -0.15
MATR3-220ENST00000512876 BHLHE40O14503 412 aa14.08□□□□□ -0.16
MATR3-220ENST00000512876 WNT2P09544 360 aa14.08□□□□□ -0.16
MATR3-220ENST00000512876 NOS3P29474 1203 aa14.08□□□□□ -0.16
MATR3-220ENST00000512876 MAGEA2P43356 314 aa14.08□□□□□ -0.16
MATR3-220ENST00000512876 GATA4P43694 442 aa14.08□□□□□ -0.16
MATR3-220ENST00000512876 SRP9P49458 86 aaKnown RBP14.08□□□□□ -0.16
MATR3-220ENST00000512876 PAX2Q02962 417 aa14.08□□□□□ -0.16
MATR3-220ENST00000512876 TRAP1Q12931 704 aaKnown RBP14.08□□□□□ -0.16
MATR3-220ENST00000512876 GK2Q14410 553 aaPredicted RBP14.08□□□□□ -0.16
MATR3-220ENST00000512876 ESCO2Q56NI9 601 aa14.08□□□□□ -0.16
MATR3-220ENST00000512876 KLF17Q5JT82 389 aaPredicted RBP14.08□□□□□ -0.16
MATR3-220ENST00000512876 ZDHHC21Q8IVQ6 265 aa14.08□□□□□ -0.16
MATR3-220ENST00000512876 BHLHE23Q8NDY6 225 aa14.08□□□□□ -0.16
MATR3-220ENST00000512876 ZNF420Q8TAQ5 688 aaPredicted RBP14.08□□□□□ -0.16
MATR3-220ENST00000512876 GNPDA2Q8TDQ7 276 aa14.08□□□□□ -0.16
MATR3-220ENST00000512876 DACT3Q96B18 629 aaPredicted RBP14.08□□□□□ -0.16
MATR3-220ENST00000512876 MAP6Q96JE9 813 aa14.08□□□□□ -0.16
MATR3-220ENST00000512876 PITX2Q99697 317 aa14.08□□□□□ -0.16
MATR3-220ENST00000512876 BTBD10Q9BSF8 475 aa14.08□□□□□ -0.16
MATR3-220ENST00000512876 WDR76Q9H967 626 aa14.08□□□□□ -0.16
MATR3-220ENST00000512876 TMEM165Q9HC07 324 aa14.08□□□□□ -0.16
MATR3-220ENST00000512876 AUP1Q9Y679 476 aa14.08□□□□□ -0.16
MATR3-220ENST00000512876 F5H5K5 113 aa14.07□□□□□ -0.16
MATR3-220ENST00000512876 F5H5P2 479 aa14.07□□□□□ -0.16
MATR3-220ENST00000512876 KRT36O76013 467 aa14.07□□□□□ -0.16
MATR3-220ENST00000512876 CYB5R3P00387 301 aaPredicted RBP14.07□□□□□ -0.16
MATR3-220ENST00000512876 SELEP16581 610 aa14.07□□□□□ -0.16
MATR3-220ENST00000512876 FPR2P25090 351 aa14.07□□□□□ -0.16
MATR3-220ENST00000512876 OTX1P32242 354 aaPredicted RBP14.07□□□□□ -0.16
MATR3-220ENST00000512876 KHDRBS1Q07666 443 aaKnown RBP eCLIP14.07□□□□□ -0.163e-7■■□□□ 12.2
MATR3-220ENST00000512876 ZNF770Q6IQ21 691 aaPredicted RBP14.07□□□□□ -0.16
MATR3-220ENST00000512876 RPL13AP3Q6NVV1 102 aa14.07□□□□□ -0.16
MATR3-220ENST00000512876 C16orf89Q6UX73 402 aa14.07□□□□□ -0.16
MATR3-220ENST00000512876 PIGWQ7Z7B1 504 aa14.07□□□□□ -0.16
MATR3-220ENST00000512876 DEFB107AQ8IZN7 70 aa14.07□□□□□ -0.16
MATR3-220ENST00000512876 OR52E2Q8NGJ4 325 aa14.07□□□□□ -0.16
MATR3-220ENST00000512876 OR4C15Q8NGM1 316 aa14.07□□□□□ -0.16
MATR3-220ENST00000512876 OR10S1Q8NGN2 331 aa14.07□□□□□ -0.16
MATR3-220ENST00000512876 OR2AJ1Q8NGZ0 328 aa14.07□□□□□ -0.16
MATR3-220ENST00000512876 C22orf15Q8WYQ4 148 aa14.07□□□□□ -0.16
MATR3-220ENST00000512876 HCAR1Q9BXC0 346 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms