RNA–Protein interactions for RNA: ENST00000506244.5

SNCA-209, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 570 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-209ENST00000506244 ZNF81P51508 661 aa14.26□□□□□ -0.13
SNCA-209ENST00000506244 GRB2P62993 217 aaKnown RBP14.26□□□□□ -0.13
SNCA-209ENST00000506244 MRPS11P82912 194 aaKnown RBP14.26□□□□□ -0.13
SNCA-209ENST00000506244 MALLQ13021 153 aa14.26□□□□□ -0.13
SNCA-209ENST00000506244 EIF2B1Q14232 305 aaKnown RBP14.26□□□□□ -0.13
SNCA-209ENST00000506244 SLX4IPQ5VYV7 408 aa14.26□□□□□ -0.13
SNCA-209ENST00000506244 CLEC9AQ6UXN8 241 aa14.26□□□□□ -0.13
SNCA-209ENST00000506244 ZNF786Q8N393 782 aa14.26□□□□□ -0.13
SNCA-209ENST00000506244 ZNF454Q8N9F8 522 aa14.26□□□□□ -0.13
SNCA-209ENST00000506244 PTP4A1Q93096 173 aa14.26□□□□□ -0.13
SNCA-209ENST00000506244 SLAMF6Q96DU3 332 aa14.26□□□□□ -0.13
SNCA-209ENST00000506244 C1QTNF5Q9BXJ0 243 aa14.26□□□□□ -0.13
SNCA-209ENST00000506244 GABARAPL3Q9BY60 117 aa14.26□□□□□ -0.13
SNCA-209ENST00000506244 TOR3AQ9H497 397 aa14.26□□□□□ -0.13
SNCA-209ENST00000506244 APOC1P02654 83 aa14.25□□□□□ -0.13
SNCA-209ENST00000506244 KITLGP21583 273 aa14.25□□□□□ -0.13
SNCA-209ENST00000506244 DRAM2Q6UX65 266 aa14.25□□□□□ -0.13
SNCA-209ENST00000506244 FBXW12Q6X9E4 464 aa14.25□□□□□ -0.13
SNCA-209ENST00000506244 RHOUQ7L0Q8 258 aa14.25□□□□□ -0.13
SNCA-209ENST00000506244 DPY19L4Q7Z388 723 aa14.25□□□□□ -0.13
SNCA-209ENST00000506244 TIGD4Q8IY51 512 aa14.25□□□□□ -0.13
SNCA-209ENST00000506244 ST7LQ8TDW4 575 aa14.25□□□□□ -0.13
SNCA-209ENST00000506244 RDH5Q92781 318 aa14.25□□□□□ -0.13
SNCA-209ENST00000506244 ZMYND19Q96E35 227 aaPredicted RBP14.25□□□□□ -0.13
SNCA-209ENST00000506244 CHODLQ9H9P2 273 aa14.25□□□□□ -0.13
SNCA-209ENST00000506244 SAP30LQ9HAJ7 183 aa14.25□□□□□ -0.13
SNCA-209ENST00000506244 S100A14Q9HCY8 104 aa14.25□□□□□ -0.13
SNCA-209ENST00000506244 CENPMQ9NSP4 180 aa14.25□□□□□ -0.13
SNCA-209ENST00000506244 DECR2Q9NUI1 292 aa14.25□□□□□ -0.13
SNCA-209ENST00000506244 TMEFF2Q9UIK5 374 aaPredicted RBP14.25□□□□□ -0.13
SNCA-209ENST00000506244 PURGQ9UJV8 347 aaKnown RBP14.25□□□□□ -0.13
SNCA-209ENST00000506244 ZDHHC8Q9ULC8 765 aa14.25□□□□□ -0.13
SNCA-209ENST00000506244 STARD10Q9Y365 291 aa14.25□□□□□ -0.13
SNCA-209ENST00000506244 TPD52L2O43399 206 aaKnown RBP14.24□□□□□ -0.13
SNCA-209ENST00000506244 LCATP04180 440 aa14.24□□□□□ -0.13
SNCA-209ENST00000506244 HEXAP06865 529 aa14.24□□□□□ -0.13
SNCA-209ENST00000506244 ADH4P08319 380 aa14.24□□□□□ -0.13
SNCA-209ENST00000506244 SELEP16581 610 aa14.24□□□□□ -0.13
SNCA-209ENST00000506244 ACHEP22303 614 aa14.24□□□□□ -0.13
SNCA-209ENST00000506244 TNFSF4P23510 183 aa14.24□□□□□ -0.13
SNCA-209ENST00000506244 GIFP27352 417 aa14.24□□□□□ -0.13
SNCA-209ENST00000506244 HSD11B1P28845 292 aa14.24□□□□□ -0.13
SNCA-209ENST00000506244 OTX1P32242 354 aaPredicted RBP14.24□□□□□ -0.13
SNCA-209ENST00000506244 NR4A2P43354 598 aa14.24□□□□□ -0.13
SNCA-209ENST00000506244 MMP15P51511 669 aa14.24□□□□□ -0.13
SNCA-209ENST00000506244 RAD23AP54725 363 aa14.24□□□□□ -0.13
SNCA-209ENST00000506244 LOXL1Q08397 574 aaPredicted RBP14.24□□□□□ -0.13
SNCA-209ENST00000506244 PSG7Q13046 419 aa14.24□□□□□ -0.13
SNCA-209ENST00000506244 APOFQ13790 326 aa14.24□□□□□ -0.13
SNCA-209ENST00000506244 C12orf73Q69YU5 71 aa14.24□□□□□ -0.13
SNCA-209ENST00000506244 COLCA1Q6ZS62 124 aa14.24□□□□□ -0.13
SNCA-209ENST00000506244 GID4Q8IVV7 300 aa14.24□□□□□ -0.13
SNCA-209ENST00000506244 OR10S1Q8NGN2 331 aa14.24□□□□□ -0.13
SNCA-209ENST00000506244 HAVCR1Q96D42 359 aa14.24□□□□□ -0.13
SNCA-209ENST00000506244 KCNJ15Q99712 375 aa14.24□□□□□ -0.13
SNCA-209ENST00000506244 C9orf16Q9BUW7 83 aa14.24□□□□□ -0.13
SNCA-209ENST00000506244 EGLN1Q9GZT9 426 aa14.24□□□□□ -0.13
SNCA-209ENST00000506244 RIBC2Q9H4K1 309 aa14.24□□□□□ -0.13
SNCA-209ENST00000506244 OPA3Q9H6K4 179 aa14.24□□□□□ -0.13
SNCA-209ENST00000506244 SP140LQ9H930 580 aa14.24□□□□□ -0.13
SNCA-209ENST00000506244 USE1Q9NZ43 259 aa14.24□□□□□ -0.13
SNCA-209ENST00000506244 PTTG3PQ9NZH4 202 aa14.24□□□□□ -0.13
SNCA-209ENST00000506244 H2AFY2Q9P0M6 372 aaPredicted RBP14.24□□□□□ -0.13
SNCA-209ENST00000506244 SLC22A31A6NKX4 558 aa14.23□□□□□ -0.13
SNCA-209ENST00000506244 EI24O14681 340 aa14.23□□□□□ -0.13
SNCA-209ENST00000506244 PRKYO43930 277 aa14.23□□□□□ -0.13
SNCA-209ENST00000506244 NCR1O76036 304 aa14.23□□□□□ -0.13
SNCA-209ENST00000506244 HPXP02790 462 aa14.23□□□□□ -0.13
SNCA-209ENST00000506244 ALPLP05186 524 aa14.23□□□□□ -0.13
SNCA-209ENST00000506244 LYNP07948 512 aa14.23□□□□□ -0.13
SNCA-209ENST00000506244 PSKH1P11801 424 aa14.23□□□□□ -0.13
SNCA-209ENST00000506244 USF1P22415 310 aaPredicted RBP14.23□□□□□ -0.13
SNCA-209ENST00000506244 SLC2A5P22732 501 aa14.23□□□□□ -0.13
SNCA-209ENST00000506244 MAGEB1P43366 347 aa14.23□□□□□ -0.13
SNCA-209ENST00000506244 ALDH3A2P51648 485 aa14.23□□□□□ -0.13
SNCA-209ENST00000506244 CDC42P60953 191 aa14.23□□□□□ -0.13
SNCA-209ENST00000506244 CCL8P80075 99 aa14.23□□□□□ -0.13
SNCA-209ENST00000506244 NXNL2Q5VZ03 156 aa14.23□□□□□ -0.13
SNCA-209ENST00000506244 PQLC1Q8N2U9 271 aa14.23□□□□□ -0.13
SNCA-209ENST00000506244 BBS1Q8NFJ9 593 aa14.23□□□□□ -0.13
SNCA-209ENST00000506244 OTOSQ8NHW6 89 aa14.23□□□□□ -0.13
SNCA-209ENST00000506244 TMEM163Q8TC26 289 aa14.23□□□□□ -0.13
SNCA-209ENST00000506244 RNF133Q8WVZ7 376 aa14.23□□□□□ -0.13
SNCA-209ENST00000506244 CMBLQ96DG6 245 aa14.23□□□□□ -0.13
SNCA-209ENST00000506244 ELMOD3Q96FG2 381 aa14.23□□□□□ -0.13
SNCA-209ENST00000506244 ABHD6Q9BV23 337 aa14.23□□□□□ -0.13
SNCA-209ENST00000506244 POFUT1Q9H488 388 aa14.23□□□□□ -0.13
SNCA-209ENST00000506244 MTORP42345 2549 aa14.23□□□□□ -0.13
SNCA-209ENST00000506244 A0A096LNT2 108 aa14.22□□□□□ -0.13
SNCA-209ENST00000506244 ZSCAN5BA6NJL1 495 aa14.22□□□□□ -0.13
SNCA-209ENST00000506244 VWC2LB2RUY7 222 aa14.22□□□□□ -0.13
SNCA-209ENST00000506244 SPRY3O43610 288 aa14.22□□□□□ -0.13
SNCA-209ENST00000506244 TLX2O43763 284 aaPredicted RBP14.22□□□□□ -0.13
SNCA-209ENST00000506244 SELENOFO60613 162 aa14.22□□□□□ -0.13
SNCA-209ENST00000506244 IGHV1-46P01743 117 aa14.22□□□□□ -0.13
SNCA-209ENST00000506244 NAA10P41227 235 aaPredicted RBP14.22□□□□□ -0.13
SNCA-209ENST00000506244 GABPB1Q06547 395 aaPredicted RBP14.22□□□□□ -0.13
SNCA-209ENST00000506244 RSPO1Q2MKA7 263 aaPredicted RBP14.22□□□□□ -0.13
SNCA-209ENST00000506244 SLC16A9Q7RTY1 509 aa14.22□□□□□ -0.13
SNCA-209ENST00000506244 ZNF283Q8N7M2 679 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms