RNA–Protein interactions for RNA: ENST00000506063.1

TCOF1-208, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 4

Gene TCOF1, Length 526 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-208ENST00000506063 TNFRSF12AQ9NP84 129 aa2.59□□□□□ -1.99
TCOF1-208ENST00000506063 MED4Q9NPJ6 270 aa2.59□□□□□ -1.99
TCOF1-208ENST00000506063 TBCCD1Q9NVR7 557 aa2.59□□□□□ -1.99
TCOF1-208ENST00000506063 TMEM38BQ9NVV0 291 aa2.59□□□□□ -1.99
TCOF1-208ENST00000506063 AIG1Q9NVV5 245 aa2.59□□□□□ -1.99
TCOF1-208ENST00000506063 CALML5Q9NZT1 146 aa2.59□□□□□ -1.99
TCOF1-208ENST00000506063 ZIM2Q9NZV7 527 aa2.59□□□□□ -1.99
TCOF1-208ENST00000506063 ONECUT1Q9UBC0 465 aa2.59□□□□□ -1.99
TCOF1-208ENST00000506063 P2RX2Q9UBL9 471 aa2.59□□□□□ -1.99
TCOF1-208ENST00000506063 KAAG1Q9UBP8 84 aa2.59□□□□□ -1.99
TCOF1-208ENST00000506063 GIMAP2Q9UG22 337 aa2.59□□□□□ -1.99
TCOF1-208ENST00000506063 HAO1Q9UJM8 370 aa2.59□□□□□ -1.99
TCOF1-208ENST00000506063 SLC13A4Q9UKG4 626 aa2.59□□□□□ -1.99
TCOF1-208ENST00000506063 PLA2G2DQ9UNK4 145 aa2.59□□□□□ -1.99
TCOF1-208ENST00000506063 CORO2BQ9UQ03 480 aa2.59□□□□□ -1.99
TCOF1-208ENST00000506063 PKHD1L1Q86WI1 4243 aa2.59□□□□□ -1.99
TCOF1-208ENST00000506063 SH2D7A6NKC9 451 aaPredicted RBP2.58□□□□□ -2
TCOF1-208ENST00000506063 FAM90A22PA8MWA6 464 aa2.58□□□□□ -2
TCOF1-208ENST00000506063 C5orf58C9J3I9 102 aa2.58□□□□□ -2
TCOF1-208ENST00000506063 AP4M1O00189 453 aa2.58□□□□□ -2
TCOF1-208ENST00000506063 FAAHO00519 579 aa2.58□□□□□ -2
TCOF1-208ENST00000506063 SDHDO14521 159 aa2.58□□□□□ -2
TCOF1-208ENST00000506063 RFXANKO14593 260 aa2.58□□□□□ -2
TCOF1-208ENST00000506063 ANGPT2O15123 496 aa2.58□□□□□ -2
TCOF1-208ENST00000506063 UBDO15205 165 aa2.58□□□□□ -2
TCOF1-208ENST00000506063 ADAM20O43506 726 aa2.58□□□□□ -2
TCOF1-208ENST00000506063 ITM2AO43736 263 aa2.58□□□□□ -2
TCOF1-208ENST00000506063 TIMM8AO60220 97 aaPredicted RBP2.58□□□□□ -2
TCOF1-208ENST00000506063 SNNO75324 88 aaPredicted RBP2.58□□□□□ -2
TCOF1-208ENST00000506063 STX11O75558 287 aa2.58□□□□□ -2
TCOF1-208ENST00000506063 CPSF4O95639 269 aaKnown RBP2.58□□□□□ -2
TCOF1-208ENST00000506063 IL6P05231 212 aa2.58□□□□□ -2
TCOF1-208ENST00000506063 LPLP06858 475 aa2.58□□□□□ -2
TCOF1-208ENST00000506063 PRB4P10163 310 aaPredicted RBP2.58□□□□□ -2
TCOF1-208ENST00000506063 LAMP1P11279 417 aa2.58□□□□□ -2
TCOF1-208ENST00000506063 H2AFXP16104 143 aaPredicted RBP2.58□□□□□ -2
TCOF1-208ENST00000506063 ZNF43P17038 809 aa2.58□□□□□ -2
TCOF1-208ENST00000506063 AMY2BP19961 511 aa2.58□□□□□ -2
TCOF1-208ENST00000506063 EFNA1P20827 205 aaPredicted RBP2.58□□□□□ -2
TCOF1-208ENST00000506063 TNFSF4P23510 183 aa2.58□□□□□ -2
TCOF1-208ENST00000506063 AHCYP23526 432 aa2.58□□□□□ -2
TCOF1-208ENST00000506063 STOMP27105 288 aa2.58□□□□□ -2
TCOF1-208ENST00000506063 CCT3P49368 545 aaKnown RBP2.58□□□□□ -2
TCOF1-208ENST00000506063 MAP2K6P52564 334 aa2.58□□□□□ -2
TCOF1-208ENST00000506063 CRISP3P54108 245 aa2.58□□□□□ -2
TCOF1-208ENST00000506063 NME5P56597 212 aa2.58□□□□□ -2
TCOF1-208ENST00000506063 CLDN8P56748 225 aa2.58□□□□□ -2
TCOF1-208ENST00000506063 RPS26P62854 115 aaKnown RBP2.58□□□□□ -2
TCOF1-208ENST00000506063 EGR4Q05215 589 aa2.58□□□□□ -2
TCOF1-208ENST00000506063 MAB21L1Q13394 359 aa2.58□□□□□ -2
TCOF1-208ENST00000506063 KIAA0040Q15053 153 aa2.58□□□□□ -2
TCOF1-208ENST00000506063 MAPRE2Q15555 327 aa2.58□□□□□ -2
TCOF1-208ENST00000506063 MPPED2Q15777 294 aa2.58□□□□□ -2
TCOF1-208ENST00000506063 MS4A18Q3C1V0 323 aa2.58□□□□□ -2
TCOF1-208ENST00000506063 LIN52Q52LA3 116 aa2.58□□□□□ -2
TCOF1-208ENST00000506063 GPAT3Q53EU6 434 aa2.58□□□□□ -2
TCOF1-208ENST00000506063 TNFAIP8L3Q5GJ75 292 aa2.58□□□□□ -2
TCOF1-208ENST00000506063 PABPC1L2AQ5JQF8 200 aa2.58□□□□□ -2
TCOF1-208ENST00000506063 SPANXN4Q5MJ08 99 aa2.58□□□□□ -2
TCOF1-208ENST00000506063 FAM27D1Q5T7N8 215 aa2.58□□□□□ -2
TCOF1-208ENST00000506063 CARD17Q5XLA6 110 aa2.58□□□□□ -2
TCOF1-208ENST00000506063 NCR3LG1Q68D85 454 aa2.58□□□□□ -2
TCOF1-208ENST00000506063 SFRP4Q6FHJ7 346 aaPredicted RBP2.58□□□□□ -2
TCOF1-208ENST00000506063 OR4F3Q6IEY1 312 aa2.58□□□□□ -2
TCOF1-208ENST00000506063 TNFAIP8L2Q6P589 184 aaPredicted RBP2.58□□□□□ -2
TCOF1-208ENST00000506063 EIF3MQ7L2H7 374 aaKnown RBP2.58□□□□□ -2
TCOF1-208ENST00000506063 ANKRD46Q86W74 232 aa2.58□□□□□ -2
TCOF1-208ENST00000506063 FAM90A1Q86YD7 464 aa2.58□□□□□ -2
TCOF1-208ENST00000506063 PEX5LQ8IYB4 626 aa2.58□□□□□ -2
TCOF1-208ENST00000506063 C10orf111Q8N326 155 aa2.58□□□□□ -2
TCOF1-208ENST00000506063 KRTCAP2Q8N6L1 136 aa2.58□□□□□ -2
TCOF1-208ENST00000506063 GVQW1Q8N7I0 195 aa2.58□□□□□ -2
TCOF1-208ENST00000506063 OR8J2Q8NGG1 315 aa2.58□□□□□ -2
TCOF1-208ENST00000506063 OR1J2Q8NGS2 313 aa2.58□□□□□ -2
TCOF1-208ENST00000506063 OR4Q3Q8NH05 313 aa2.58□□□□□ -2
TCOF1-208ENST00000506063 ZNF563Q8TA94 476 aa2.58□□□□□ -2
TCOF1-208ENST00000506063 ABHD4Q8TB40 342 aa2.58□□□□□ -2
TCOF1-208ENST00000506063 CNOT9Q92600 299 aaKnown RBP2.58□□□□□ -2
TCOF1-208ENST00000506063 ST6GALNAC6Q969X2 333 aa2.58□□□□□ -2
TCOF1-208ENST00000506063 ZBTB9Q96C00 473 aa2.58□□□□□ -2
TCOF1-208ENST00000506063 TXNDC15Q96J42 360 aa2.58□□□□□ -2
TCOF1-208ENST00000506063 EGLN2Q96KS0 407 aa2.58□□□□□ -2
TCOF1-208ENST00000506063 MAGEB18Q96M61 343 aa2.58□□□□□ -2
TCOF1-208ENST00000506063 CCDC115Q96NT0 180 aa2.58□□□□□ -2
TCOF1-208ENST00000506063 OR52E6Q96RD3 313 aa2.58□□□□□ -2
TCOF1-208ENST00000506063 SORT1Q99523 831 aa2.58□□□□□ -2
TCOF1-208ENST00000506063 THAP7Q9BT49 309 aaPredicted RBP2.58□□□□□ -2
TCOF1-208ENST00000506063 MMADHCQ9H3L0 296 aaPredicted RBP2.58□□□□□ -2
TCOF1-208ENST00000506063 ARMC7Q9H6L4 198 aa2.58□□□□□ -2
TCOF1-208ENST00000506063 DCLRE1BQ9H816 532 aa2.58□□□□□ -2
TCOF1-208ENST00000506063 AKTIPQ9H8T0 292 aa2.58□□□□□ -2
TCOF1-208ENST00000506063 ISYNA1Q9NPH2 558 aa2.58□□□□□ -2
TCOF1-208ENST00000506063 EXOSC3Q9NQT5 275 aaKnown RBP2.58□□□□□ -2
TCOF1-208ENST00000506063 POLE3Q9NRF9 147 aa2.58□□□□□ -2
TCOF1-208ENST00000506063 MAN2C1Q9NTJ4 1040 aa2.58□□□□□ -2
TCOF1-208ENST00000506063 ZFP57Q9NU63 452 aa2.58□□□□□ -2
TCOF1-208ENST00000506063 THUMPD1Q9NXG2 353 aaKnown RBP2.58□□□□□ -2
TCOF1-208ENST00000506063 BAIAP2L1Q9UHR4 511 aa2.58□□□□□ -2
TCOF1-208ENST00000506063 BTNL2Q9UIR0 455 aa2.58□□□□□ -2
TCOF1-208ENST00000506063 ANGPT4Q9Y264 503 aa2.58□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms