RNA–Protein interactions for RNA: ENST00000503945.2

MED28-203, Transcript of mediator complex subunit 28, humanhuman

TSL 1 (best)

Gene MED28, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-203ENST00000503945 PGBD2Q6P3X8 592 aa10.09□□□□□ -0.79
MED28-203ENST00000503945 CYP2R1Q6VVX0 501 aa10.09□□□□□ -0.79
MED28-203ENST00000503945 DHFR2Q86XF0 187 aa10.09□□□□□ -0.79
MED28-203ENST00000503945 ARHGAP24Q8N264 748 aa10.09□□□□□ -0.79
MED28-203ENST00000503945 ZNF283Q8N7M2 679 aa10.09□□□□□ -0.79
MED28-203ENST00000503945 SLC26A10Q8NG04 563 aa10.09□□□□□ -0.79
MED28-203ENST00000503945 OR52L1Q8NGH7 329 aa10.09□□□□□ -0.79
MED28-203ENST00000503945 ZFAND2BQ8WV99 257 aa10.09□□□□□ -0.79
MED28-203ENST00000503945 ITLN1Q8WWA0 313 aa10.09□□□□□ -0.79
MED28-203ENST00000503945 POP5Q969H6 163 aaKnown RBP10.09□□□□□ -0.79
MED28-203ENST00000503945 OR2V2Q96R30 315 aa10.09□□□□□ -0.79
MED28-203ENST00000503945 JMJD8Q96S16 334 aa10.09□□□□□ -0.79
MED28-203ENST00000503945 CCT8L2Q96SF2 557 aa10.09□□□□□ -0.79
MED28-203ENST00000503945 GCM1Q9NP62 436 aa10.09□□□□□ -0.79
MED28-203ENST00000503945 ACTR3BQ9P1U1 418 aa10.09□□□□□ -0.79
MED28-203ENST00000503945 PPIAL4EA0A075B759 164 aa10.08□□□□□ -0.8
MED28-203ENST00000503945 PPIAL4CA0A0B4J2A2 164 aa10.08□□□□□ -0.8
MED28-203ENST00000503945 LRRC30A6NM36 301 aa10.08□□□□□ -0.8
MED28-203ENST00000503945 PPIAL4DF5H284 164 aa10.08□□□□□ -0.8
MED28-203ENST00000503945 CCNB2O95067 398 aa10.08□□□□□ -0.8
MED28-203ENST00000503945 IGHV2-70P01814 119 aa10.08□□□□□ -0.8
MED28-203ENST00000503945 LCATP04180 440 aa10.08□□□□□ -0.8
MED28-203ENST00000503945 PPIAL4FP0DN26 164 aa10.08□□□□□ -0.8
MED28-203ENST00000503945 CPT2P23786 658 aa10.08□□□□□ -0.8
MED28-203ENST00000503945 SLC6A9P48067 706 aa10.08□□□□□ -0.8
MED28-203ENST00000503945 TPTEP56180 551 aa10.08□□□□□ -0.8
MED28-203ENST00000503945 BTG1P62324 171 aa10.08□□□□□ -0.8
MED28-203ENST00000503945 TMEM155Q4W5P6 130 aa10.08□□□□□ -0.8
MED28-203ENST00000503945 SLC18B1Q6NT16 456 aa10.08□□□□□ -0.8
MED28-203ENST00000503945 C1orf229Q6ZS94 237 aaPredicted RBP10.08□□□□□ -0.8
MED28-203ENST00000503945 USP43Q70EL4 1123 aa10.08□□□□□ -0.8
MED28-203ENST00000503945 FITM2Q8N6M3 262 aa10.08□□□□□ -0.8
MED28-203ENST00000503945 SDR9C7Q8NEX9 313 aa10.08□□□□□ -0.8
MED28-203ENST00000503945 OR2T4Q8NH00 348 aa10.08□□□□□ -0.8
MED28-203ENST00000503945 SPTSSAQ969W0 71 aa10.08□□□□□ -0.8
MED28-203ENST00000503945 ATF6BQ99941 703 aa10.08□□□□□ -0.8
MED28-203ENST00000503945 TMPRSS13Q9BYE2 586 aa10.08□□□□□ -0.8
MED28-203ENST00000503945 PATZ1Q9HBE1 687 aaKnown RBP10.08□□□□□ -0.8
MED28-203ENST00000503945 IL20Q9NYY1 176 aa10.08□□□□□ -0.8
MED28-203ENST00000503945 CYB5R1Q9UHQ9 305 aa10.08□□□□□ -0.8
MED28-203ENST00000503945 KCNG2Q9UJ96 466 aa10.08□□□□□ -0.8
MED28-203ENST00000503945 TMEM178BH3BS89 294 aa10.07□□□□□ -0.8
MED28-203ENST00000503945 TRIM77I1YAP6 450 aa10.07□□□□□ -0.8
MED28-203ENST00000503945 SPRY1O43609 319 aaPredicted RBP10.07□□□□□ -0.8
MED28-203ENST00000503945 ACSM4P0C7M7 580 aa10.07□□□□□ -0.8
MED28-203ENST00000503945 EPHA1P21709 976 aa10.07□□□□□ -0.8
MED28-203ENST00000503945 ZFP36P26651 326 aaKnown RBP10.07□□□□□ -0.8
MED28-203ENST00000503945 GGT2P36268 569 aa10.07□□□□□ -0.8
MED28-203ENST00000503945 MDH2P40926 338 aaKnown RBP10.07□□□□□ -0.8
MED28-203ENST00000503945 ERFP50548 548 aa10.07□□□□□ -0.8
MED28-203ENST00000503945 TRIM25Q14258 630 aaKnown RBP10.07□□□□□ -0.8
MED28-203ENST00000503945 FAM98BQ52LJ0 330 aaKnown RBP10.07□□□□□ -0.8
MED28-203ENST00000503945 ZNF620Q6ZNG0 422 aa10.07□□□□□ -0.8
MED28-203ENST00000503945 COLCA1Q6ZS62 124 aa10.07□□□□□ -0.8
MED28-203ENST00000503945 PGAP1Q75T13 922 aa10.07□□□□□ -0.8
MED28-203ENST00000503945 C1QL2Q7Z5L3 287 aa10.07□□□□□ -0.8
MED28-203ENST00000503945 NAA40Q86UY6 237 aa10.07□□□□□ -0.8
MED28-203ENST00000503945 LINC00346Q8IVM7 164 aa10.07□□□□□ -0.8
MED28-203ENST00000503945 MUC20Q8N307 709 aaPredicted RBP10.07□□□□□ -0.8
MED28-203ENST00000503945 PROKR2Q8NFJ6 384 aa10.07□□□□□ -0.8
MED28-203ENST00000503945 SPRYD4Q8WW59 207 aaPredicted RBP10.07□□□□□ -0.8
MED28-203ENST00000503945 SLCO4A1Q96BD0 722 aa10.07□□□□□ -0.8
MED28-203ENST00000503945 SLC30A2Q9BRI3 323 aa10.07□□□□□ -0.8
MED28-203ENST00000503945 C1QTNF5Q9BXJ0 243 aa10.07□□□□□ -0.8
MED28-203ENST00000503945 MUC13Q9H3R2 512 aa10.07□□□□□ -0.8
MED28-203ENST00000503945 EGLN3Q9H6Z9 239 aa10.07□□□□□ -0.8
MED28-203ENST00000503945 DCAF16Q9NXF7 216 aa10.07□□□□□ -0.8
MED28-203ENST00000503945 LYVE1Q9Y5Y7 322 aa10.07□□□□□ -0.8
MED28-203ENST00000503945 CDH10Q9Y6N8 788 aa10.07□□□□□ -0.8
MED28-203ENST00000503945 IQCF6A8MYZ5 107 aa10.06□□□□□ -0.8
MED28-203ENST00000503945 H0YL77 283 aa10.06□□□□□ -0.8
MED28-203ENST00000503945 RGS9O75916 674 aaPredicted RBP10.06□□□□□ -0.8
MED28-203ENST00000503945 IRF2P14316 349 aa10.06□□□□□ -0.8
MED28-203ENST00000503945 EGR1P18146 543 aa10.06□□□□□ -0.8
MED28-203ENST00000503945 ADRA2CP18825 462 aa10.06□□□□□ -0.8
MED28-203ENST00000503945 FMO3P31513 532 aa10.06□□□□□ -0.8
MED28-203ENST00000503945 TRAP1Q12931 704 aaKnown RBP10.06□□□□□ -0.8
MED28-203ENST00000503945 GK2Q14410 553 aaPredicted RBP10.06□□□□□ -0.8
MED28-203ENST00000503945 ZMYND11Q15326 602 aa10.06□□□□□ -0.8
MED28-203ENST00000503945 TAF13Q15543 124 aa10.06□□□□□ -0.8
MED28-203ENST00000503945 MICAQ29983 383 aa10.06□□□□□ -0.8
MED28-203ENST00000503945 RBMS3Q6XE24 437 aaKnown RBP10.06□□□□□ -0.8
MED28-203ENST00000503945 CFAP77Q6ZQR2 320 aa10.06□□□□□ -0.8
MED28-203ENST00000503945 RASSF6Q6ZTQ3 369 aa10.06□□□□□ -0.8
MED28-203ENST00000503945 C1orf87Q8N0U7 546 aa10.06□□□□□ -0.8
MED28-203ENST00000503945 BPIFB2Q8N4F0 458 aa10.06□□□□□ -0.8
MED28-203ENST00000503945 CYB561A3Q8NBI2 242 aa10.06□□□□□ -0.8
MED28-203ENST00000503945 BHLHE23Q8NDY6 225 aa10.06□□□□□ -0.8
MED28-203ENST00000503945 SEMA6DQ8NFY4 1073 aa10.06□□□□□ -0.8
MED28-203ENST00000503945 MEGF10Q96KG7 1140 aa10.06□□□□□ -0.8
MED28-203ENST00000503945 LRGUKQ96M69 825 aa10.06□□□□□ -0.8
MED28-203ENST00000503945 DDOQ99489 341 aa10.06□□□□□ -0.8
MED28-203ENST00000503945 SUCNR1Q9BXA5 334 aa10.06□□□□□ -0.8
MED28-203ENST00000503945 TSSK6Q9BXA6 273 aa10.06□□□□□ -0.8
MED28-203ENST00000503945 FN3KQ9H479 309 aa10.06□□□□□ -0.8
MED28-203ENST00000503945 MAGIXQ9H6Y5 334 aa10.06□□□□□ -0.8
MED28-203ENST00000503945 REEP1Q9H902 201 aa10.06□□□□□ -0.8
MED28-203ENST00000503945 WDR76Q9H967 626 aa10.06□□□□□ -0.8
MED28-203ENST00000503945 TMEM165Q9HC07 324 aa10.06□□□□□ -0.8
MED28-203ENST00000503945 MMP26Q9NRE1 261 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms