RNA–Protein interactions for RNA: ENST00000496826.1

USF3-204, Transcript of upstream transcription factor family member 3, humanhuman

TSL 1 (best)

Gene USF3, Length 8,397 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-204ENST00000496826 OR5AU1Q8NGC0 362 aa5.37□□□□□ -1.55
USF3-204ENST00000496826 OR6K2Q8NGY2 324 aa5.37□□□□□ -1.55
USF3-204ENST00000496826 MED30Q96HR3 178 aa5.37□□□□□ -1.55
USF3-204ENST00000496826 GJD4Q96KN9 370 aaPredicted RBP5.37□□□□□ -1.55
USF3-204ENST00000496826 HHIPQ96QV1 700 aa5.37□□□□□ -1.55
USF3-204ENST00000496826 ST6GALNAC5Q9BVH7 336 aa5.37□□□□□ -1.55
USF3-204ENST00000496826 NXF2Q9GZY0 626 aaKnown RBP5.37□□□□□ -1.55
USF3-204ENST00000496826 STARD5Q9NSY2 213 aa5.37□□□□□ -1.55
USF3-204ENST00000496826 SHPKQ9UHJ6 478 aa5.37□□□□□ -1.55
USF3-204ENST00000496826 SLCO3A1Q9UIG8 710 aa5.37□□□□□ -1.55
USF3-204ENST00000496826 WIPI2Q9Y4P8 454 aa5.37□□□□□ -1.55
USF3-204ENST00000496826 DOCK9Q9BZ29 2069 aa5.37□□□□□ -1.55
USF3-204ENST00000496826 TRGV10A0A0A0MS01 117 aa5.37□□□□□ -1.55
USF3-204ENST00000496826 H3BMM0 161 aa5.37□□□□□ -1.55
USF3-204ENST00000496826 ZFAND5O76080 213 aa5.37□□□□□ -1.55
USF3-204ENST00000496826 OPN1LWP04000 364 aa5.37□□□□□ -1.55
USF3-204ENST00000496826 OR8G3PP0DMU2 310 aa5.37□□□□□ -1.55
USF3-204ENST00000496826 PSMB6P28072 239 aa5.37□□□□□ -1.55
USF3-204ENST00000496826 NR0B2Q15466 257 aa5.37□□□□□ -1.55
USF3-204ENST00000496826 HAGHQ16775 308 aa5.37□□□□□ -1.55
USF3-204ENST00000496826 FRG2Q64ET8 278 aa5.37□□□□□ -1.55
USF3-204ENST00000496826 ACOT7LQ6ZUV0 252 aa5.37□□□□□ -1.55
USF3-204ENST00000496826 SLC38A9Q8NBW4 561 aa5.37□□□□□ -1.55
USF3-204ENST00000496826 OR2T35Q8NGX2 323 aa5.37□□□□□ -1.55
USF3-204ENST00000496826 UBE2WQ96B02 151 aa5.37□□□□□ -1.55
USF3-204ENST00000496826 WDR92Q96MX6 357 aa5.37□□□□□ -1.55
USF3-204ENST00000496826 TSGA13Q96PP4 275 aa5.37□□□□□ -1.55
USF3-204ENST00000496826 FRG2BQ96QU4 278 aa5.37□□□□□ -1.55
USF3-204ENST00000496826 KCNMB3Q9NPA1 279 aa5.37□□□□□ -1.55
USF3-204ENST00000496826 PISDQ9UG56 409 aa5.37□□□□□ -1.55
USF3-204ENST00000496826 BTRCQ9Y297 605 aa5.37□□□□□ -1.55
USF3-204ENST00000496826 TBL2Q9Y4P3 447 aaKnown RBP5.37□□□□□ -1.55
USF3-204ENST00000496826 NLRP1Q9C000 1473 aa5.37□□□□□ -1.55
USF3-204ENST00000496826 TCRBV5S4A2TA0A5A2 114 aa5.36□□□□□ -1.55
USF3-204ENST00000496826 HEPACAM2A8MVW5 462 aa5.36□□□□□ -1.55
USF3-204ENST00000496826 PRRT4C9JH25 899 aa5.36□□□□□ -1.55
USF3-204ENST00000496826 ZNF623O75123 536 aa5.36□□□□□ -1.55
USF3-204ENST00000496826 NDUFB7P17568 137 aa5.36□□□□□ -1.55
USF3-204ENST00000496826 MPGP29372 298 aa5.36□□□□□ -1.55
USF3-204ENST00000496826 OR1D2P34982 312 aa5.36□□□□□ -1.55
USF3-204ENST00000496826 SNRPGP62308 76 aaKnown RBP5.36□□□□□ -1.55
USF3-204ENST00000496826 LIMS2Q7Z4I7 341 aa5.36□□□□□ -1.55
USF3-204ENST00000496826 ARL14EPQ8N8R7 260 aaPredicted RBP5.36□□□□□ -1.55
USF3-204ENST00000496826 MRAPQ8TCY5 172 aa5.36□□□□□ -1.55
USF3-204ENST00000496826 SLC25A46Q96AG3 418 aa5.36□□□□□ -1.55
USF3-204ENST00000496826 TVP23CQ96ET8 276 aa5.36□□□□□ -1.55
USF3-204ENST00000496826 ZIC5Q96T25 663 aa5.36□□□□□ -1.55
USF3-204ENST00000496826 TBX5Q99593 518 aa5.36□□□□□ -1.55
USF3-204ENST00000496826 PIP5K1AQ99755 562 aa5.36□□□□□ -1.55
USF3-204ENST00000496826 PIPOXQ9P0Z9 390 aa5.36□□□□□ -1.55
USF3-204ENST00000496826 KDM4FA0A1W2PPD8 638 aa5.36□□□□□ -1.55
USF3-204ENST00000496826 OR2W5A6NFC9 320 aa5.36□□□□□ -1.55
USF3-204ENST00000496826 A8MV72 311 aaPredicted RBP5.36□□□□□ -1.55
USF3-204ENST00000496826 NDUFB2O95178 105 aa5.36□□□□□ -1.55
USF3-204ENST00000496826 CSF2RAP15509 400 aa5.36□□□□□ -1.55
USF3-204ENST00000496826 OTX2P32243 289 aa5.36□□□□□ -1.55
USF3-204ENST00000496826 GNG4P50150 75 aa5.36□□□□□ -1.55
USF3-204ENST00000496826 MTPNP58546 118 aa5.36□□□□□ -1.55
USF3-204ENST00000496826 ZNF385BQ569K4 471 aa5.36□□□□□ -1.55
USF3-204ENST00000496826 DPPA3Q6W0C5 159 aa5.36□□□□□ -1.55
USF3-204ENST00000496826 RNF148Q8N7C7 305 aa5.36□□□□□ -1.55
USF3-204ENST00000496826 OR2G3Q8NGZ4 309 aa5.36□□□□□ -1.55
USF3-204ENST00000496826 SLC35B4Q969S0 331 aa5.36□□□□□ -1.55
USF3-204ENST00000496826 PCED1BQ96HM7 432 aa5.36□□□□□ -1.55
USF3-204ENST00000496826 FCRL1Q96LA6 429 aa5.36□□□□□ -1.55
USF3-204ENST00000496826 MCHR1Q99705 422 aa5.36□□□□□ -1.55
USF3-204ENST00000496826 NRIP2Q9BQI9 281 aa5.36□□□□□ -1.55
USF3-204ENST00000496826 CLDND1Q9NY35 253 aa5.36□□□□□ -1.55
USF3-204ENST00000496826 CC2D2AQ9P2K1 1620 aa5.36□□□□□ -1.55
USF3-204ENST00000496826 SP1P08047 785 aa5.36□□□□□ -1.55
USF3-204ENST00000496826 ERVK11-1P61568 191 aa5.36□□□□□ -1.55
USF3-204ENST00000496826 MRPS11P82912 194 aaKnown RBP5.36□□□□□ -1.55
USF3-204ENST00000496826 IL10RBQ08334 325 aa5.36□□□□□ -1.55
USF3-204ENST00000496826 MLLT11Q13015 90 aaPredicted RBP5.36□□□□□ -1.55
USF3-204ENST00000496826 SPCS2Q15005 226 aa5.36□□□□□ -1.55
USF3-204ENST00000496826 DCAF12Q5T6F0 453 aa5.36□□□□□ -1.55
USF3-204ENST00000496826 C4orf32Q8N8J7 132 aa5.36□□□□□ -1.55
USF3-204ENST00000496826 OR52N2Q8NGI0 321 aa5.36□□□□□ -1.55
USF3-204ENST00000496826 NKX2-4Q9H2Z4 354 aa5.36□□□□□ -1.55
USF3-204ENST00000496826 BPIFA1Q9NP55 256 aa5.36□□□□□ -1.55
USF3-204ENST00000496826 TSPOAP1O95153 1857 aa5.36□□□□□ -1.55
USF3-204ENST00000496826 TRAV39A0A0B4J263 110 aa5.36□□□□□ -1.55
USF3-204ENST00000496826 LOC101059915A0A1B0GWI6 518 aaPredicted RBP5.36□□□□□ -1.55
USF3-204ENST00000496826 SOCS5O75159 536 aa5.36□□□□□ -1.55
USF3-204ENST00000496826 CNR2P34972 360 aa5.36□□□□□ -1.55
USF3-204ENST00000496826 PTGFRP43088 359 aa5.36□□□□□ -1.55
USF3-204ENST00000496826 HIST1H1AQ02539 215 aaPredicted RBP5.36□□□□□ -1.55
USF3-204ENST00000496826 PRDX1Q06830 199 aaKnown RBP5.36□□□□□ -1.55
USF3-204ENST00000496826 AANATQ16613 207 aa5.36□□□□□ -1.55
USF3-204ENST00000496826 MAJINQ3KP22 176 aa5.36□□□□□ -1.55
USF3-204ENST00000496826 PRSS54Q6PEW0 395 aa5.36□□□□□ -1.55
USF3-204ENST00000496826 OTOP2Q7RTS6 562 aa5.36□□□□□ -1.55
USF3-204ENST00000496826 GPR32P1Q8NGA4 272 aa5.36□□□□□ -1.55
USF3-204ENST00000496826 NUBPLQ8TB37 319 aa5.36□□□□□ -1.55
USF3-204ENST00000496826 MRPL30Q8TCC3 161 aaKnown RBP5.36□□□□□ -1.55
USF3-204ENST00000496826 TMEM134Q9H6X4 195 aa5.36□□□□□ -1.55
USF3-204ENST00000496826 ABCA8O94911 1581 aa5.36□□□□□ -1.55
USF3-204ENST00000496826 TOP2BQ02880 1626 aa5.36□□□□□ -1.55
USF3-204ENST00000496826 ST8SIA3O43173 380 aa5.36□□□□□ -1.55
USF3-204ENST00000496826 LIMS3P0CW19 117 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms