RNA–Protein interactions for RNA: ENST00000495835.1

HLA-C-209, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,073 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-209ENST00000495835 TMEM106BQ9NUM4 274 aa20.49■□□□□ 0.87
HLA-C-209ENST00000495835 TAS2R1Q9NYW7 299 aa20.49■□□□□ 0.87
HLA-C-209ENST00000495835 J3QLI3 93 aa20.48■□□□□ 0.87
HLA-C-209ENST00000495835 PLPP2O43688 288 aa20.48■□□□□ 0.87
HLA-C-209ENST00000495835 RAP2AP10114 183 aa20.48■□□□□ 0.87
HLA-C-209ENST00000495835 TRAP1Q12931 704 aaKnown RBP20.48■□□□□ 0.87
HLA-C-209ENST00000495835 ZNF362Q5T0B9 420 aaPredicted RBP20.48■□□□□ 0.87
HLA-C-209ENST00000495835 ZSCAN2Q7Z7L9 614 aaPredicted RBP20.48■□□□□ 0.87
HLA-C-209ENST00000495835 LRGUKQ96M69 825 aa20.48■□□□□ 0.87
HLA-C-209ENST00000495835 ZNF582Q96NG8 517 aaPredicted RBP20.48■□□□□ 0.87
HLA-C-209ENST00000495835 PTTG3PQ9NZH4 202 aa20.48■□□□□ 0.87
HLA-C-209ENST00000495835 A0A0A6YYJ9 748 aa20.47■□□□□ 0.87
HLA-C-209ENST00000495835 IQCF6A8MYZ5 107 aa20.47■□□□□ 0.87
HLA-C-209ENST00000495835 TCF21O43680 179 aa20.47■□□□□ 0.87
HLA-C-209ENST00000495835 ACSM4P0C7M7 580 aa20.47■□□□□ 0.87
HLA-C-209ENST00000495835 TMEM155Q4W5P6 130 aa20.47■□□□□ 0.87
HLA-C-209ENST00000495835 CD300LDQ6UXZ3 194 aa20.47■□□□□ 0.87
HLA-C-209ENST00000495835 CFAP77Q6ZQR2 320 aa20.47■□□□□ 0.87
HLA-C-209ENST00000495835 AQP11Q8NBQ7 271 aa20.47■□□□□ 0.87
HLA-C-209ENST00000495835 HCAR1Q9BXC0 346 aa20.47■□□□□ 0.87
HLA-C-209ENST00000495835 MRPL22Q9NWU5 206 aaKnown RBP20.47■□□□□ 0.87
HLA-C-209ENST00000495835 PPP1R3CQ9UQK1 317 aa20.47■□□□□ 0.87
HLA-C-209ENST00000495835 SAMHD1Q9Y3Z3 626 aaKnown RBP20.47■□□□□ 0.87
HLA-C-209ENST00000495835 PPIAL4EA0A075B759 164 aa20.46■□□□□ 0.87
HLA-C-209ENST00000495835 PPIAL4CA0A0B4J2A2 164 aa20.46■□□□□ 0.87
HLA-C-209ENST00000495835 A0A0G2JMP0 313 aa20.46■□□□□ 0.87
HLA-C-209ENST00000495835 A0A0X1KG70 313 aa20.46■□□□□ 0.87
HLA-C-209ENST00000495835 A0A1B0GWJ7 208 aa20.46■□□□□ 0.87
HLA-C-209ENST00000495835 PPIAL4DF5H284 164 aa20.46■□□□□ 0.87
HLA-C-209ENST00000495835 IGHV2-70P01814 119 aa20.46■□□□□ 0.87
HLA-C-209ENST00000495835 PPIAL4FP0DN26 164 aa20.46■□□□□ 0.87
HLA-C-209ENST00000495835 CPT2P23786 658 aa20.46■□□□□ 0.87
HLA-C-209ENST00000495835 TPTEP56180 551 aa20.46■□□□□ 0.87
HLA-C-209ENST00000495835 HLXQ14774 488 aaPredicted RBP20.46■□□□□ 0.87
HLA-C-209ENST00000495835 KRTAP24-1Q3LI83 254 aa20.46■□□□□ 0.87
HLA-C-209ENST00000495835 SPRNQ5BIV9 151 aa20.46■□□□□ 0.87
HLA-C-209ENST00000495835 FAHD2BQ6P2I3 314 aaPredicted RBP20.46■□□□□ 0.87
HLA-C-209ENST00000495835 LINC00346Q8IVM7 164 aa20.46■□□□□ 0.87
HLA-C-209ENST00000495835 PROKR2Q8NFJ6 384 aa20.46■□□□□ 0.87
HLA-C-209ENST00000495835 OR2T33Q8NG76 320 aa20.46■□□□□ 0.87
HLA-C-209ENST00000495835 OR4M2Q8NGB6 313 aa20.46■□□□□ 0.87
HLA-C-209ENST00000495835 FAHD2AQ96GK7 314 aa20.46■□□□□ 0.87
HLA-C-209ENST00000495835 OR2V2Q96R30 315 aa20.46■□□□□ 0.87
HLA-C-209ENST00000495835 SLC30A2Q9BRI3 323 aa20.46■□□□□ 0.87
HLA-C-209ENST00000495835 TSSK6Q9BXA6 273 aa20.46■□□□□ 0.87
HLA-C-209ENST00000495835 PLA2G12AQ9BZM1 189 aa20.46■□□□□ 0.87
HLA-C-209ENST00000495835 FN3KQ9H479 309 aa20.46■□□□□ 0.87
HLA-C-209ENST00000495835 PNRC2Q9NPJ4 139 aaKnown RBP20.46■□□□□ 0.87
HLA-C-209ENST00000495835 TBC1D23Q9NUY8 699 aa20.46■□□□□ 0.87
HLA-C-209ENST00000495835 ISPDA4D126 451 aa20.45■□□□□ 0.86
HLA-C-209ENST00000495835 ACOT8O14734 319 aa20.45■□□□□ 0.86
HLA-C-209ENST00000495835 BLVRAP53004 296 aa20.45■□□□□ 0.86
HLA-C-209ENST00000495835 MALLQ13021 153 aa20.45■□□□□ 0.86
HLA-C-209ENST00000495835 OR2T2Q6IF00 324 aa20.45■□□□□ 0.86
HLA-C-209ENST00000495835 SHQ1Q6PI26 577 aaKnown RBP20.45■□□□□ 0.86
HLA-C-209ENST00000495835 LRRC28Q86X40 367 aaPredicted RBP20.45■□□□□ 0.86
HLA-C-209ENST00000495835 SPICQ8N5J4 248 aa20.45■□□□□ 0.86
HLA-C-209ENST00000495835 ATG16L2Q8NAA4 619 aa20.45■□□□□ 0.86
HLA-C-209ENST00000495835 OR8D4Q8NGM9 314 aa20.45■□□□□ 0.86
HLA-C-209ENST00000495835 ST7LQ8TDW4 575 aa20.45■□□□□ 0.86
HLA-C-209ENST00000495835 ITLN1Q8WWA0 313 aa20.45■□□□□ 0.86
HLA-C-209ENST00000495835 SPTSSAQ969W0 71 aa20.45■□□□□ 0.86
HLA-C-209ENST00000495835 RBM4Q9BWF3 364 aaKnown RBP20.45■□□□□ 0.86
HLA-C-209ENST00000495835 ARRDC5A6NEK1 342 aa20.44■□□□□ 0.86
HLA-C-209ENST00000495835 AQP12BA6NM10 295 aa20.44■□□□□ 0.86
HLA-C-209ENST00000495835 F5H5K5 113 aa20.44■□□□□ 0.86
HLA-C-209ENST00000495835 SRP9P49458 86 aaKnown RBP20.44■□□□□ 0.86
HLA-C-209ENST00000495835 ERFP50548 548 aa20.44■□□□□ 0.86
HLA-C-209ENST00000495835 SLC25A1P53007 311 aa20.44■□□□□ 0.86
HLA-C-209ENST00000495835 PCK2Q16822 640 aa20.44■□□□□ 0.86
HLA-C-209ENST00000495835 TEX30Q5JUR7 227 aa20.44■□□□□ 0.86
HLA-C-209ENST00000495835 AQP12AQ8IXF9 295 aa20.44■□□□□ 0.86
HLA-C-209ENST00000495835 KLHL36Q8N4N3 616 aa20.44■□□□□ 0.86
HLA-C-209ENST00000495835 CYB561A3Q8NBI2 242 aa20.44■□□□□ 0.86
HLA-C-209ENST00000495835 SLC37A3Q8NCC5 494 aa20.44■□□□□ 0.86
HLA-C-209ENST00000495835 MAP6Q96JE9 813 aa20.44■□□□□ 0.86
HLA-C-209ENST00000495835 NMNAT2Q9BZQ4 307 aa20.44■□□□□ 0.86
HLA-C-209ENST00000495835 GCM1Q9NP62 436 aa20.44■□□□□ 0.86
HLA-C-209ENST00000495835 DDX28Q9NUL7 540 aaKnown RBP20.44■□□□□ 0.86
HLA-C-209ENST00000495835 TMEM100Q9NV29 134 aa20.44■□□□□ 0.86
HLA-C-209ENST00000495835 U3KQV3 271 aa20.44■□□□□ 0.86
HLA-C-209ENST00000495835 FOXH1O75593 365 aa20.43■□□□□ 0.86
HLA-C-209ENST00000495835 FSTL3O95633 263 aa20.43■□□□□ 0.86
HLA-C-209ENST00000495835 IFNGP01579 166 aa20.43■□□□□ 0.86
HLA-C-209ENST00000495835 FMO3P31513 532 aa20.43■□□□□ 0.86
HLA-C-209ENST00000495835 OTX1P32242 354 aaPredicted RBP20.43■□□□□ 0.86
HLA-C-209ENST00000495835 BTG1P62324 171 aa20.43■□□□□ 0.86
HLA-C-209ENST00000495835 PPP1R8Q12972 351 aaKnown RBP20.43■□□□□ 0.86
HLA-C-209ENST00000495835 ZNF181Q2M3W8 571 aa20.43■□□□□ 0.86
HLA-C-209ENST00000495835 DCAF12L2Q5VW00 463 aa20.43■□□□□ 0.86
HLA-C-209ENST00000495835 OR5AS1Q8N127 324 aa20.43■□□□□ 0.86
HLA-C-209ENST00000495835 SIGLEC11Q96RL6 698 aa20.43■□□□□ 0.86
HLA-C-209ENST00000495835 METTL17Q9H7H0 456 aaPredicted RBP20.43■□□□□ 0.86
HLA-C-209ENST00000495835 VNN3Q9NY84 501 aa20.43■□□□□ 0.86
HLA-C-209ENST00000495835 PCDHB10Q9UN67 800 aa20.43■□□□□ 0.86
HLA-C-209ENST00000495835 POLR3KQ9Y2Y1 108 aaPredicted RBP20.43■□□□□ 0.86
HLA-C-209ENST00000495835 NOP16Q9Y3C1 178 aaKnown RBP20.43■□□□□ 0.86
HLA-C-209ENST00000495835 M0R135 149 aa20.42■□□□□ 0.86
HLA-C-209ENST00000495835 CST1P01037 141 aa20.42■□□□□ 0.86
HLA-C-209ENST00000495835 LCATP04180 440 aa20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms