RNA–Protein interactions for RNA: ENST00000493430.5

PTCD3-218, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 782 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-218ENST00000493430 OR6C70A6NIJ9 312 aa2.42□□□□□ -2.02
PTCD3-218ENST00000493430 SLC22A20A6NK97 555 aa2.42□□□□□ -2.02
PTCD3-218ENST00000493430 H0YAE9 185 aa2.42□□□□□ -2.02
PTCD3-218ENST00000493430 TP53I11O14683 189 aa2.42□□□□□ -2.02
PTCD3-218ENST00000493430 BCKDKO14874 412 aa2.42□□□□□ -2.02
PTCD3-218ENST00000493430 CFLARO15519 480 aa2.42□□□□□ -2.02
PTCD3-218ENST00000493430 SHOX2O60902 331 aaPredicted RBP2.42□□□□□ -2.02
PTCD3-218ENST00000493430 CDH16O75309 829 aa2.42□□□□□ -2.02
PTCD3-218ENST00000493430 LYZL6O75951 148 aa2.42□□□□□ -2.02
PTCD3-218ENST00000493430 KCNK2O95069 426 aa2.42□□□□□ -2.02
PTCD3-218ENST00000493430 NUDT14O95848 222 aa2.42□□□□□ -2.02
PTCD3-218ENST00000493430 LY6G6DO95868 133 aa2.42□□□□□ -2.02
PTCD3-218ENST00000493430 EPPINO95925 133 aa2.42□□□□□ -2.02
PTCD3-218ENST00000493430 BPGMP07738 259 aa2.42□□□□□ -2.02
PTCD3-218ENST00000493430 OR2T7P0C7T2 308 aa2.42□□□□□ -2.02
PTCD3-218ENST00000493430 UBTFL6P0CB48 400 aaPredicted RBP2.42□□□□□ -2.02
PTCD3-218ENST00000493430 OR12D1P0DN82 309 aa2.42□□□□□ -2.02
PTCD3-218ENST00000493430 UROSP10746 265 aa2.42□□□□□ -2.02
PTCD3-218ENST00000493430 BCL3P20749 454 aa2.42□□□□□ -2.02
PTCD3-218ENST00000493430 DRD5P21918 477 aa2.42□□□□□ -2.02
PTCD3-218ENST00000493430 ELAVL4P26378 380 aaKnown RBP2.42□□□□□ -2.02
PTCD3-218ENST00000493430 AGTR1P30556 359 aa2.42□□□□□ -2.02
PTCD3-218ENST00000493430 SERPINB1P30740 379 aa2.42□□□□□ -2.02
PTCD3-218ENST00000493430 NTSP30990 170 aa2.42□□□□□ -2.02
PTCD3-218ENST00000493430 PTGER4P35408 488 aa2.42□□□□□ -2.02
PTCD3-218ENST00000493430 MAP3K8P41279 467 aa2.42□□□□□ -2.02
PTCD3-218ENST00000493430 MFAP4P55083 255 aa2.42□□□□□ -2.02
PTCD3-218ENST00000493430 XGP55808 180 aa2.42□□□□□ -2.02
PTCD3-218ENST00000493430 DLK1P80370 383 aa2.42□□□□□ -2.02
PTCD3-218ENST00000493430 IFFO1Q0D2I5 559 aa2.42□□□□□ -2.02
PTCD3-218ENST00000493430 PDE7AQ13946 482 aa2.42□□□□□ -2.02
PTCD3-218ENST00000493430 RCN2Q14257 317 aa2.42□□□□□ -2.02
PTCD3-218ENST00000493430 GANABQ14697 944 aaKnown RBP2.42□□□□□ -2.02
PTCD3-218ENST00000493430 SYPL1Q16563 259 aa2.42□□□□□ -2.02
PTCD3-218ENST00000493430 ZNF74Q16587 644 aa2.42□□□□□ -2.02
PTCD3-218ENST00000493430 TMEM44Q2T9K0 475 aa2.42□□□□□ -2.02
PTCD3-218ENST00000493430 SPIN4Q56A73 249 aa2.42□□□□□ -2.02
PTCD3-218ENST00000493430 TTMPQ5BVD1 217 aa2.42□□□□□ -2.02
PTCD3-218ENST00000493430 CDKL4Q5MAI5 379 aa2.42□□□□□ -2.02
PTCD3-218ENST00000493430 C6orf136Q5SQH8 315 aa2.42□□□□□ -2.02
PTCD3-218ENST00000493430 DCST2Q5T1A1 773 aa2.42□□□□□ -2.02
PTCD3-218ENST00000493430 RIPPLY2Q5TAB7 128 aa2.42□□□□□ -2.02
PTCD3-218ENST00000493430 CST9LP1Q5W188 147 aa2.42□□□□□ -2.02
PTCD3-218ENST00000493430 PET117Q6UWS5 81 aa2.42□□□□□ -2.02
PTCD3-218ENST00000493430 PAMR1Q6UXH9 720 aa2.42□□□□□ -2.02
PTCD3-218ENST00000493430 ZNF836Q6ZNA1 936 aa2.42□□□□□ -2.02
PTCD3-218ENST00000493430 CYS1Q717R9 158 aa2.42□□□□□ -2.02
PTCD3-218ENST00000493430 CEACAM19Q7Z692 300 aa2.42□□□□□ -2.02
PTCD3-218ENST00000493430 ADCK1Q86TW2 530 aa2.42□□□□□ -2.02
PTCD3-218ENST00000493430 RNF130Q86XS8 419 aa2.42□□□□□ -2.02
PTCD3-218ENST00000493430 VRK2Q86Y07 508 aa2.42□□□□□ -2.02
PTCD3-218ENST00000493430 KRTAP11-1Q8IUC1 163 aa2.42□□□□□ -2.02
PTCD3-218ENST00000493430 OR2L13Q8N349 312 aa2.42□□□□□ -2.02
PTCD3-218ENST00000493430 KDM8Q8N371 416 aa2.42□□□□□ -2.02
PTCD3-218ENST00000493430 FGFRL1Q8N441 504 aa2.42□□□□□ -2.02
PTCD3-218ENST00000493430 FNDC5Q8NAU1 212 aa2.42□□□□□ -2.02
PTCD3-218ENST00000493430 OR8H1Q8NGG4 311 aa2.42□□□□□ -2.02
PTCD3-218ENST00000493430 OR4A15Q8NGL6 344 aa2.42□□□□□ -2.02
PTCD3-218ENST00000493430 OR8K3Q8NH51 312 aa2.42□□□□□ -2.02
PTCD3-218ENST00000493430 OR10D3Q8NH80 312 aa2.42□□□□□ -2.02
PTCD3-218ENST00000493430 RNASE6Q93091 150 aaKnown RBP2.42□□□□□ -2.02
PTCD3-218ENST00000493430 MAL2Q969L2 176 aa2.42□□□□□ -2.02
PTCD3-218ENST00000493430 RFT1Q96AA3 541 aa2.42□□□□□ -2.02
PTCD3-218ENST00000493430 S100PBPQ96BU1 408 aa2.42□□□□□ -2.02
PTCD3-218ENST00000493430 TUBGCP3Q96CW5 907 aa2.42□□□□□ -2.02
PTCD3-218ENST00000493430 TMCO6Q96DC7 493 aa2.42□□□□□ -2.02
PTCD3-218ENST00000493430 TRIM44Q96DX7 344 aaPredicted RBP2.42□□□□□ -2.02
PTCD3-218ENST00000493430 PGM2Q96G03 612 aa2.42□□□□□ -2.02
PTCD3-218ENST00000493430 ARL5BQ96KC2 179 aa2.42□□□□□ -2.02
PTCD3-218ENST00000493430 SLC35G5Q96KT7 338 aa2.42□□□□□ -2.02
PTCD3-218ENST00000493430 MS4A4EQ96PG1 132 aa2.42□□□□□ -2.02
PTCD3-218ENST00000493430 CITED2Q99967 270 aaPredicted RBP2.42□□□□□ -2.02
PTCD3-218ENST00000493430 EBF4Q9BQW3 602 aa2.42□□□□□ -2.02
PTCD3-218ENST00000493430 CENPKQ9BS16 269 aa2.42□□□□□ -2.02
PTCD3-218ENST00000493430 FAIM2Q9BWQ8 316 aa2.42□□□□□ -2.02
PTCD3-218ENST00000493430 CAPS2Q9BXY5 557 aa2.42□□□□□ -2.02
PTCD3-218ENST00000493430 PARD6BQ9BYG5 372 aa2.42□□□□□ -2.02
PTCD3-218ENST00000493430 FAM129AQ9BZQ8 928 aa2.42□□□□□ -2.02
PTCD3-218ENST00000493430 ROGDIQ9GZN7 287 aa2.42□□□□□ -2.02
PTCD3-218ENST00000493430 HOXD1Q9GZZ0 328 aa2.42□□□□□ -2.02
PTCD3-218ENST00000493430 OR51I1Q9H343 314 aa2.42□□□□□ -2.02
PTCD3-218ENST00000493430 REEP4Q9H6H4 257 aa2.42□□□□□ -2.02
PTCD3-218ENST00000493430 OPA3Q9H6K4 179 aa2.42□□□□□ -2.02
PTCD3-218ENST00000493430 PLEKHF2Q9H8W4 249 aa2.42□□□□□ -2.02
PTCD3-218ENST00000493430 NOX3Q9HBY0 568 aa2.42□□□□□ -2.02
PTCD3-218ENST00000493430 SLCO1B3Q9NPD5 702 aa2.42□□□□□ -2.02
PTCD3-218ENST00000493430 MED17Q9NVC6 651 aa2.42□□□□□ -2.02
PTCD3-218ENST00000493430 C1orf109Q9NX04 203 aa2.42□□□□□ -2.02
PTCD3-218ENST00000493430 PSD3Q9NYI0 1048 aa2.42□□□□□ -2.02
PTCD3-218ENST00000493430 CNIH4Q9P003 139 aa2.42□□□□□ -2.02
PTCD3-218ENST00000493430 LGALS13Q9UHV8 139 aa2.42□□□□□ -2.02
PTCD3-218ENST00000493430 ZNF107Q9UII5 783 aaPredicted RBP2.42□□□□□ -2.02
PTCD3-218ENST00000493430 KIAA2026Q5HYC2 2103 aa2.42□□□□□ -2.02
PTCD3-218ENST00000493430 NF1P21359 2839 aa2.41□□□□□ -2.02
PTCD3-218ENST00000493430 JMJD1CQ15652 2540 aa2.41□□□□□ -2.02
PTCD3-218ENST00000493430 TMEM72A0PK05 275 aa2.41□□□□□ -2.02
PTCD3-218ENST00000493430 TUBAL3A6NHL2 446 aa2.41□□□□□ -2.02
PTCD3-218ENST00000493430 NPIPB9F8W1W9 429 aa2.41□□□□□ -2.02
PTCD3-218ENST00000493430 ADAMDEC1O15204 470 aa2.41□□□□□ -2.02
PTCD3-218ENST00000493430 CLOCKO15516 846 aa2.41□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms