RNA–Protein interactions for RNA: ENST00000493265.2

LIME1-208, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 2

Gene LIME1, Length 661 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-208ENST00000493265 IGHV2OR16-5A0A0B4J2B6 119 aa14.88□□□□□ -0.03
LIME1-208ENST00000493265 ATP6V1G2-DDX39BF2Z307 99 aa14.88□□□□□ -0.03
LIME1-208ENST00000493265 SIAH2O43255 324 aa14.88□□□□□ -0.03
LIME1-208ENST00000493265 RGS10O43665 173 aa14.88□□□□□ -0.03
LIME1-208ENST00000493265 RPP14O95059 124 aaKnown RBP14.88□□□□□ -0.03
LIME1-208ENST00000493265 CRYAAP02489 173 aa14.88□□□□□ -0.03
LIME1-208ENST00000493265 KRT8P05787 483 aa14.88□□□□□ -0.03
LIME1-208ENST00000493265 CDK1P06493 297 aa14.88□□□□□ -0.03
LIME1-208ENST00000493265 CD3EP07766 207 aa14.88□□□□□ -0.03
LIME1-208ENST00000493265 FAM157BP0CG42 384 aa14.88□□□□□ -0.03
LIME1-208ENST00000493265 COX5BP10606 129 aa14.88□□□□□ -0.03
LIME1-208ENST00000493265 GRB2P62993 217 aaKnown RBP14.88□□□□□ -0.03
LIME1-208ENST00000493265 TLE4Q04727 773 aa14.88□□□□□ -0.03
LIME1-208ENST00000493265 NCMAPQ5T1S8 102 aa14.88□□□□□ -0.03
LIME1-208ENST00000493265 ADAM5Q6NVV9 412 aa14.88□□□□□ -0.03
LIME1-208ENST00000493265 SLC22A25Q6T423 547 aa14.88□□□□□ -0.03
LIME1-208ENST00000493265 NAA40Q86UY6 237 aa14.88□□□□□ -0.03
LIME1-208ENST00000493265 IPCEF1Q8WWN9 437 aaPredicted RBP14.88□□□□□ -0.03
LIME1-208ENST00000493265 KCNJ15Q99712 375 aa14.88□□□□□ -0.03
LIME1-208ENST00000493265 SLC24A3Q9HC58 644 aa14.88□□□□□ -0.03
LIME1-208ENST00000493265 DDX28Q9NUL7 540 aaKnown RBP14.88□□□□□ -0.03
LIME1-208ENST00000493265 FKBP14Q9NWM8 211 aa14.88□□□□□ -0.03
LIME1-208ENST00000493265 MRM2Q9UI43 246 aaKnown RBP14.88□□□□□ -0.03
LIME1-208ENST00000493265 GTF2A1LQ9UNN4 478 aa14.88□□□□□ -0.03
LIME1-208ENST00000493265 EXOSC1Q9Y3B2 195 aaKnown RBP14.88□□□□□ -0.03
LIME1-208ENST00000493265 ZFHX3Q15911 3703 aa14.88□□□□□ -0.03
LIME1-208ENST00000493265 PRR14LQ5THK1 2151 aa14.87□□□□□ -0.03
LIME1-208ENST00000493265 METTL15A6NJ78 407 aa14.87□□□□□ -0.03
LIME1-208ENST00000493265 DEFB108AA8MXU0 73 aa14.87□□□□□ -0.03
LIME1-208ENST00000493265 M0R135 149 aa14.87□□□□□ -0.03
LIME1-208ENST00000493265 ABHD16AO95870 558 aa14.87□□□□□ -0.03
LIME1-208ENST00000493265 MT-ND2P03891 347 aa14.87□□□□□ -0.03
LIME1-208ENST00000493265 LIMS3P0CW19 117 aa14.87□□□□□ -0.03
LIME1-208ENST00000493265 LIMS4P0CW20 117 aa14.87□□□□□ -0.03
LIME1-208ENST00000493265 SLC2A1P11166 492 aa14.87□□□□□ -0.03
LIME1-208ENST00000493265 CX3CR1P49238 355 aa14.87□□□□□ -0.03
LIME1-208ENST00000493265 RIDAP52758 137 aaKnown RBP14.87□□□□□ -0.03
LIME1-208ENST00000493265 CDH15P55291 814 aa14.87□□□□□ -0.03
LIME1-208ENST00000493265 TPTEP56180 551 aa14.87□□□□□ -0.03
LIME1-208ENST00000493265 OR12D2P58182 307 aa14.87□□□□□ -0.03
LIME1-208ENST00000493265 SLC35A2P78381 396 aa14.87□□□□□ -0.03
LIME1-208ENST00000493265 HGFACQ04756 655 aa14.87□□□□□ -0.03
LIME1-208ENST00000493265 EGR3Q06889 387 aa14.87□□□□□ -0.03
LIME1-208ENST00000493265 GALEQ14376 348 aa14.87□□□□□ -0.03
LIME1-208ENST00000493265 RSPO1Q2MKA7 263 aaPredicted RBP14.87□□□□□ -0.03
LIME1-208ENST00000493265 C3orf36Q3SXR2 165 aa14.87□□□□□ -0.03
LIME1-208ENST00000493265 FAM220AQ7Z4H9 259 aa14.87□□□□□ -0.03
LIME1-208ENST00000493265 ZNF679Q8IYX0 411 aa14.87□□□□□ -0.03
LIME1-208ENST00000493265 MRPL48Q96GC5 212 aaKnown RBP14.87□□□□□ -0.03
LIME1-208ENST00000493265 ZNF799Q96GE5 643 aa14.87□□□□□ -0.03
LIME1-208ENST00000493265 C4orf36Q96KX1 117 aa14.87□□□□□ -0.03
LIME1-208ENST00000493265 HS3ST6Q96QI5 342 aa14.87□□□□□ -0.03
LIME1-208ENST00000493265 INPP5EQ9NRR6 644 aa14.87□□□□□ -0.03
LIME1-208ENST00000493265 EIF3KQ9UBQ5 218 aaKnown RBP14.87□□□□□ -0.03
LIME1-208ENST00000493265 POU2F3Q9UKI9 436 aa14.87□□□□□ -0.03
LIME1-208ENST00000493265 ATP23Q9Y6H3 246 aa14.87□□□□□ -0.03
LIME1-208ENST00000493265 PLAUP00749 431 aa14.86□□□□□ -0.03
LIME1-208ENST00000493265 LCATP04180 440 aa14.86□□□□□ -0.03
LIME1-208ENST00000493265 ANXA2P07355 339 aaKnown RBP14.86□□□□□ -0.03
LIME1-208ENST00000493265 ACSM4P0C7M7 580 aa14.86□□□□□ -0.03
LIME1-208ENST00000493265 PSMB10P40306 273 aa14.86□□□□□ -0.03
LIME1-208ENST00000493265 WNT5AP41221 380 aa14.86□□□□□ -0.03
LIME1-208ENST00000493265 CHN2P52757 468 aa14.86□□□□□ -0.03
LIME1-208ENST00000493265 ROM1Q03395 351 aa14.86□□□□□ -0.03
LIME1-208ENST00000493265 TESK1Q15569 626 aa14.86□□□□□ -0.03
LIME1-208ENST00000493265 OR2G6Q5TZ20 316 aa14.86□□□□□ -0.03
LIME1-208ENST00000493265 VHLLQ6RSH7 139 aa14.86□□□□□ -0.03
LIME1-208ENST00000493265 KLHL36Q8N4N3 616 aa14.86□□□□□ -0.03
LIME1-208ENST00000493265 ACBD4Q8NC06 268 aa14.86□□□□□ -0.03
LIME1-208ENST00000493265 IL17RDQ8NFM7 739 aa14.86□□□□□ -0.03
LIME1-208ENST00000493265 KBTBD8Q8NFY9 601 aa14.86□□□□□ -0.03
LIME1-208ENST00000493265 C14orf79Q96F83 325 aa14.86□□□□□ -0.03
LIME1-208ENST00000493265 YTHDF1Q9BYJ9 559 aaKnown RBP14.86□□□□□ -0.03
LIME1-208ENST00000493265 DUSP21Q9H596 190 aa14.86□□□□□ -0.03
LIME1-208ENST00000493265 ISG20L2Q9H9L3 353 aaKnown RBP14.86□□□□□ -0.03
LIME1-208ENST00000493265 KCNN3Q9UGI6 736 aa14.86□□□□□ -0.03
LIME1-208ENST00000493265 ATPIF1Q9UII2 106 aa14.86□□□□□ -0.03
LIME1-208ENST00000493265 RNF115Q9Y4L5 304 aa14.86□□□□□ -0.03
LIME1-208ENST00000493265 A6NNC1 897 aa14.85□□□□□ -0.03
LIME1-208ENST00000493265 MYL12BO14950 172 aa14.85□□□□□ -0.03
LIME1-208ENST00000493265 ZNF35P13682 527 aa14.85□□□□□ -0.03
LIME1-208ENST00000493265 NR1H2P55055 460 aa14.85□□□□□ -0.03
LIME1-208ENST00000493265 ACTA2P62736 377 aa14.85□□□□□ -0.03
LIME1-208ENST00000493265 ACTG2P63267 376 aa14.85□□□□□ -0.03
LIME1-208ENST00000493265 CDONQ4KMG0 1287 aa14.85□□□□□ -0.03
LIME1-208ENST00000493265 ZNF684Q5T5D7 378 aa14.85□□□□□ -0.03
LIME1-208ENST00000493265 TMPRSS11AQ6ZMR5 421 aa14.85□□□□□ -0.03
LIME1-208ENST00000493265 FAM57BQ71RH2 274 aa14.85□□□□□ -0.03
LIME1-208ENST00000493265 ABHD4Q8TB40 342 aa14.85□□□□□ -0.03
LIME1-208ENST00000493265 NEUROG1Q92886 237 aa14.85□□□□□ -0.03
LIME1-208ENST00000493265 C4orf45Q96LM5 186 aa14.85□□□□□ -0.03
LIME1-208ENST00000493265 ACOXLQ9NUZ1 547 aa14.85□□□□□ -0.03
LIME1-208ENST00000493265 NF1P21359 2839 aa14.85□□□□□ -0.03
LIME1-208ENST00000493265 MTORP42345 2549 aa14.85□□□□□ -0.03
LIME1-208ENST00000493265 TBX1O43435 398 aa14.84□□□□□ -0.03
LIME1-208ENST00000493265 ZNF254O75437 659 aa14.84□□□□□ -0.03
LIME1-208ENST00000493265 NGFP01138 241 aa14.84□□□□□ -0.03
LIME1-208ENST00000493265 LCKP06239 509 aa14.84□□□□□ -0.03
LIME1-208ENST00000493265 TACSTD2P09758 323 aa14.84□□□□□ -0.03
LIME1-208ENST00000493265 MAP2K4P45985 399 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms