RNA–Protein interactions for RNA: ENST00000491064.5

CTDSP1-210, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 786 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-210ENST00000491064 RIMS3Q9UJD0 308 aa11.26□□□□□ -0.61
CTDSP1-210ENST00000491064 VPREB3Q9UKI3 123 aa11.26□□□□□ -0.61
CTDSP1-210ENST00000491064 SH3GLB1Q9Y371 365 aa11.26□□□□□ -0.61
CTDSP1-210ENST00000491064 MED31Q9Y3C7 131 aa11.26□□□□□ -0.61
CTDSP1-210ENST00000491064 FBP2O00757 339 aa11.25□□□□□ -0.61
CTDSP1-210ENST00000491064 SHOX2O60902 331 aaPredicted RBP11.25□□□□□ -0.61
CTDSP1-210ENST00000491064 FAM20BO75063 409 aa11.25□□□□□ -0.61
CTDSP1-210ENST00000491064 TNFRSF1BP20333 461 aa11.25□□□□□ -0.61
CTDSP1-210ENST00000491064 FPR3P25089 353 aa11.25□□□□□ -0.61
CTDSP1-210ENST00000491064 LOXL3P58215 753 aa11.25□□□□□ -0.61
CTDSP1-210ENST00000491064 COX10Q12887 443 aa11.25□□□□□ -0.61
CTDSP1-210ENST00000491064 AGKQ53H12 422 aa11.25□□□□□ -0.61
CTDSP1-210ENST00000491064 CCDC92Q53HC0 331 aaPredicted RBP11.25□□□□□ -0.61
CTDSP1-210ENST00000491064 INTS11Q5TA45 600 aaKnown RBP11.25□□□□□ -0.61
CTDSP1-210ENST00000491064 DHDDSQ86SQ9 333 aa11.25□□□□□ -0.61
CTDSP1-210ENST00000491064 PDZD9Q8IXQ8 264 aa11.25□□□□□ -0.61
CTDSP1-210ENST00000491064 CELF2-AS1Q8N7Q2 184 aa11.25□□□□□ -0.61
CTDSP1-210ENST00000491064 OR11L1Q8NGX0 322 aa11.25□□□□□ -0.61
CTDSP1-210ENST00000491064 OR1F12Q8NHA8 337 aa11.25□□□□□ -0.61
CTDSP1-210ENST00000491064 ERGIC1Q969X5 290 aa11.25□□□□□ -0.61
CTDSP1-210ENST00000491064 PPP1R14AQ96A00 147 aa11.25□□□□□ -0.61
CTDSP1-210ENST00000491064 APOBEC3DQ96AK3 386 aaPredicted RBP11.25□□□□□ -0.61
CTDSP1-210ENST00000491064 KAT8Q9H7Z6 458 aaKnown RBP11.25□□□□□ -0.61
CTDSP1-210ENST00000491064 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.25□□□□□ -0.61
CTDSP1-210ENST00000491064 TMEM100Q9NV29 134 aa11.25□□□□□ -0.61
CTDSP1-210ENST00000491064 COL7A1Q02388 2944 aa11.25□□□□□ -0.61
CTDSP1-210ENST00000491064 DNAH9Q9NYC9 4486 aa11.25□□□□□ -0.61
CTDSP1-210ENST00000491064 TGFBR2P37173 567 aa11.24□□□□□ -0.61
CTDSP1-210ENST00000491064 RAD23AP54725 363 aa11.24□□□□□ -0.61
CTDSP1-210ENST00000491064 ARF6P62330 175 aa11.24□□□□□ -0.61
CTDSP1-210ENST00000491064 FHL1Q13642 323 aa11.24□□□□□ -0.61
CTDSP1-210ENST00000491064 HERPUD1Q15011 391 aa11.24□□□□□ -0.61
CTDSP1-210ENST00000491064 OTPQ5XKR4 325 aa11.24□□□□□ -0.61
CTDSP1-210ENST00000491064 SFRP4Q6FHJ7 346 aaPredicted RBP11.24□□□□□ -0.61
CTDSP1-210ENST00000491064 Q6ZTK2 550 aa11.24□□□□□ -0.61
CTDSP1-210ENST00000491064 CCDC80Q76M96 950 aa11.24□□□□□ -0.61
CTDSP1-210ENST00000491064 BPIFA2Q96DR5 249 aa11.24□□□□□ -0.61
CTDSP1-210ENST00000491064 CGREF1Q99674 301 aa11.24□□□□□ -0.61
CTDSP1-210ENST00000491064 EBF4Q9BQW3 602 aa11.24□□□□□ -0.61
CTDSP1-210ENST00000491064 SEMA6AQ9H2E6 1030 aa11.24□□□□□ -0.61
CTDSP1-210ENST00000491064 WDR76Q9H967 626 aa11.24□□□□□ -0.61
CTDSP1-210ENST00000491064 UFSP2Q9NUQ7 469 aa11.24□□□□□ -0.61
CTDSP1-210ENST00000491064 ZNRD1Q9P1U0 126 aa11.24□□□□□ -0.61
CTDSP1-210ENST00000491064 ATPIF1Q9UII2 106 aa11.24□□□□□ -0.61
CTDSP1-210ENST00000491064 FAM96BQ9Y3D0 163 aa11.24□□□□□ -0.61
CTDSP1-210ENST00000491064 TENM3Q9P273 2699 aa11.23□□□□□ -0.61
CTDSP1-210ENST00000491064 TRAV27A0A087WT01 109 aa11.23□□□□□ -0.61
CTDSP1-210ENST00000491064 TEX13CA0A0J9YWL9 993 aa11.23□□□□□ -0.61
CTDSP1-210ENST00000491064 ELOVL7A1L3X0 281 aa11.23□□□□□ -0.61
CTDSP1-210ENST00000491064 BTBD17A6NE02 478 aa11.23□□□□□ -0.61
CTDSP1-210ENST00000491064 LGALS8O00214 317 aa11.23□□□□□ -0.61
CTDSP1-210ENST00000491064 RER1O15258 196 aa11.23□□□□□ -0.61
CTDSP1-210ENST00000491064 GPR37O15354 613 aa11.23□□□□□ -0.61
CTDSP1-210ENST00000491064 ADAM20O43506 726 aa11.23□□□□□ -0.61
CTDSP1-210ENST00000491064 FCN3O75636 299 aa11.23□□□□□ -0.61
CTDSP1-210ENST00000491064 FBP1P09467 338 aa11.23□□□□□ -0.61
CTDSP1-210ENST00000491064 IFI30P13284 250 aa11.23□□□□□ -0.61
CTDSP1-210ENST00000491064 CTLA4P16410 223 aa11.23□□□□□ -0.61
CTDSP1-210ENST00000491064 CD200P41217 278 aa11.23□□□□□ -0.61
CTDSP1-210ENST00000491064 IDH3AP50213 366 aa11.23□□□□□ -0.61
CTDSP1-210ENST00000491064 PRSS12P56730 875 aa11.23□□□□□ -0.61
CTDSP1-210ENST00000491064 MPPED2Q15777 294 aa11.23□□□□□ -0.61
CTDSP1-210ENST00000491064 KCNJ8Q15842 424 aa11.23□□□□□ -0.61
CTDSP1-210ENST00000491064 VAX1Q5SQQ9 334 aa11.23□□□□□ -0.61
CTDSP1-210ENST00000491064 PRAMEF6Q5VXH4 476 aa11.23□□□□□ -0.61
CTDSP1-210ENST00000491064 SLC35E4Q6ICL7 350 aa11.23□□□□□ -0.61
CTDSP1-210ENST00000491064 CROCCP2Q86T23 111 aa11.23□□□□□ -0.61
CTDSP1-210ENST00000491064 MICU2Q8IYU8 434 aa11.23□□□□□ -0.61
CTDSP1-210ENST00000491064 GALNT4Q8N4A0 578 aa11.23□□□□□ -0.61
CTDSP1-210ENST00000491064 DPP10Q8N608 796 aa11.23□□□□□ -0.61
CTDSP1-210ENST00000491064 OR51A7Q8NH64 312 aa11.23□□□□□ -0.61
CTDSP1-210ENST00000491064 OR10A6Q8NH74 314 aa11.23□□□□□ -0.61
CTDSP1-210ENST00000491064 ECSITQ9BQ95 431 aa11.23□□□□□ -0.61
CTDSP1-210ENST00000491064 RASSF4Q9H2L5 321 aa11.23□□□□□ -0.61
CTDSP1-210ENST00000491064 RNF7Q9UBF6 113 aa11.23□□□□□ -0.61
CTDSP1-210ENST00000491064 FBLN5Q9UBX5 448 aa11.23□□□□□ -0.61
CTDSP1-210ENST00000491064 HTR3EA5X5Y0 456 aa11.22□□□□□ -0.61
CTDSP1-210ENST00000491064 OR10H3O60404 316 aa11.22□□□□□ -0.61
CTDSP1-210ENST00000491064 OR1E2P47887 323 aa11.22□□□□□ -0.61
CTDSP1-210ENST00000491064 GZMMP51124 257 aa11.22□□□□□ -0.61
CTDSP1-210ENST00000491064 SLC18A1P54219 525 aa11.22□□□□□ -0.61
CTDSP1-210ENST00000491064 LSM6P62312 80 aaKnown RBP11.22□□□□□ -0.61
CTDSP1-210ENST00000491064 DBPQ10586 325 aaPredicted RBP11.22□□□□□ -0.61
CTDSP1-210ENST00000491064 VMACQ2NL98 169 aa11.22□□□□□ -0.61
CTDSP1-210ENST00000491064 OXLD1Q5BKU9 147 aa11.22□□□□□ -0.61
CTDSP1-210ENST00000491064 MESTQ5EB52 335 aa11.22□□□□□ -0.61
CTDSP1-210ENST00000491064 BTN2A1Q7KYR7 527 aa11.22□□□□□ -0.61
CTDSP1-210ENST00000491064 VMO1Q7Z5L0 202 aa11.22□□□□□ -0.61
CTDSP1-210ENST00000491064 CCDC28BQ9BUN5 200 aa11.22□□□□□ -0.61
CTDSP1-210ENST00000491064 AURKAIP1Q9NWT8 199 aaPredicted RBP11.22□□□□□ -0.61
CTDSP1-210ENST00000491064 BAG5Q9UL15 447 aa11.22□□□□□ -0.61
CTDSP1-210ENST00000491064 ADAM18Q9Y3Q7 739 aa11.22□□□□□ -0.61
CTDSP1-210ENST00000491064 PRSS37A4D1T9 235 aa11.21□□□□□ -0.61
CTDSP1-210ENST00000491064 NDUFA2O43678 99 aa11.21□□□□□ -0.61
CTDSP1-210ENST00000491064 AHCYL1O43865 530 aa11.21□□□□□ -0.61
CTDSP1-210ENST00000491064 GABRA5P31644 462 aa11.21□□□□□ -0.61
CTDSP1-210ENST00000491064 ANKDD1AQ495B1 522 aa11.21□□□□□ -0.61
CTDSP1-210ENST00000491064 CDONQ4KMG0 1287 aa11.21□□□□□ -0.61
CTDSP1-210ENST00000491064 OAFQ86UD1 273 aa11.21□□□□□ -0.61
CTDSP1-210ENST00000491064 C11orf44Q8N8P7 122 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms