RNA–Protein interactions for RNA: ENST00000490609.1

COL2A1-207, Transcript of collagen type II alpha 1 chain, humanhuman

TSL 2

Gene COL2A1, Length 679 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-207ENST00000490609 TMIGD2Q96BF3 282 aa12.95□□□□□ -0.34
COL2A1-207ENST00000490609 HSH2DQ96JZ2 352 aa12.95□□□□□ -0.34
COL2A1-207ENST00000490609 WDR76Q9H967 626 aa12.95□□□□□ -0.34
COL2A1-207ENST00000490609 FGFR1OP2Q9NVK5 253 aa12.95□□□□□ -0.34
COL2A1-207ENST00000490609 GID8Q9NWU2 228 aa12.95□□□□□ -0.34
COL2A1-207ENST00000490609 PDP1Q9P0J1 537 aaPredicted RBP12.95□□□□□ -0.34
COL2A1-207ENST00000490609 ARMCX1Q9P291 453 aa12.95□□□□□ -0.34
COL2A1-207ENST00000490609 OR5V1Q9UGF6 321 aa12.95□□□□□ -0.34
COL2A1-207ENST00000490609 ATPIF1Q9UII2 106 aa12.95□□□□□ -0.34
COL2A1-207ENST00000490609 MMP24Q9Y5R2 645 aa12.95□□□□□ -0.34
COL2A1-207ENST00000490609 IER3IP1Q9Y5U9 82 aa12.95□□□□□ -0.34
COL2A1-207ENST00000490609 IGLV1-36A0A0B4J1U3 117 aa12.94□□□□□ -0.34
COL2A1-207ENST00000490609 TRAV40A0A0B4J280 105 aa12.94□□□□□ -0.34
COL2A1-207ENST00000490609 J3QW42 95 aa12.94□□□□□ -0.34
COL2A1-207ENST00000490609 SOCS2O14508 198 aa12.94□□□□□ -0.34
COL2A1-207ENST00000490609 HOXA3O43365 443 aaPredicted RBP12.94□□□□□ -0.34
COL2A1-207ENST00000490609 ZNF682O95780 498 aa12.94□□□□□ -0.34
COL2A1-207ENST00000490609 RPS2P15880 293 aaKnown RBP12.94□□□□□ -0.34
COL2A1-207ENST00000490609 CPT2P23786 658 aa12.94□□□□□ -0.34
COL2A1-207ENST00000490609 PSMB10P40306 273 aa12.94□□□□□ -0.34
COL2A1-207ENST00000490609 GATA4P43694 442 aa12.94□□□□□ -0.34
COL2A1-207ENST00000490609 RAD23AP54725 363 aa12.94□□□□□ -0.34
COL2A1-207ENST00000490609 IFI44LQ53G44 452 aa12.94□□□□□ -0.34
COL2A1-207ENST00000490609 OR10S1Q8NGN2 331 aa12.94□□□□□ -0.34
COL2A1-207ENST00000490609 LZICQ8WZA0 190 aa12.94□□□□□ -0.34
COL2A1-207ENST00000490609 C7orf34Q96L11 122 aa12.94□□□□□ -0.34
COL2A1-207ENST00000490609 COG8Q96MW5 612 aa12.94□□□□□ -0.34
COL2A1-207ENST00000490609 PNRC2Q9NPJ4 139 aaKnown RBP12.94□□□□□ -0.34
COL2A1-207ENST00000490609 MIOXQ9UGB7 285 aa12.94□□□□□ -0.34
COL2A1-207ENST00000490609 ENPP4Q9Y6X5 453 aa12.94□□□□□ -0.34
COL2A1-207ENST00000490609 TRBV4-1A0A0J9YWV2 114 aa12.93□□□□□ -0.34
COL2A1-207ENST00000490609 A0A1W2PRQ8 180 aa12.93□□□□□ -0.34
COL2A1-207ENST00000490609 C5orf63A6NC05 138 aa12.93□□□□□ -0.34
COL2A1-207ENST00000490609 IFNL4K9M1U5 179 aa12.93□□□□□ -0.34
COL2A1-207ENST00000490609 XKRYO14609 159 aa12.93□□□□□ -0.34
COL2A1-207ENST00000490609 NDUFB2O95178 105 aa12.93□□□□□ -0.34
COL2A1-207ENST00000490609 PPP1R3DO95685 299 aa12.93□□□□□ -0.34
COL2A1-207ENST00000490609 SERPINA1P01009 418 aa12.93□□□□□ -0.34
COL2A1-207ENST00000490609 RGS6P49758 472 aa12.93□□□□□ -0.34
COL2A1-207ENST00000490609 GSK3BP49841 420 aa12.93□□□□□ -0.34
COL2A1-207ENST00000490609 GNB2P62879 340 aa12.93□□□□□ -0.34
COL2A1-207ENST00000490609 COX10Q12887 443 aa12.93□□□□□ -0.34
COL2A1-207ENST00000490609 DGCR6Q14129 220 aa12.93□□□□□ -0.34
COL2A1-207ENST00000490609 MPPED2Q15777 294 aa12.93□□□□□ -0.34
COL2A1-207ENST00000490609 WDR25Q64LD2 544 aaPredicted RBP12.93□□□□□ -0.34
COL2A1-207ENST00000490609 CFAP77Q6ZQR2 320 aa12.93□□□□□ -0.34
COL2A1-207ENST00000490609 RHOUQ7L0Q8 258 aa12.93□□□□□ -0.34
COL2A1-207ENST00000490609 OR6V1Q8N148 313 aa12.93□□□□□ -0.34
COL2A1-207ENST00000490609 FAM86B1Q8N7N1 296 aa12.93□□□□□ -0.34
COL2A1-207ENST00000490609 BHLHE23Q8NDY6 225 aa12.93□□□□□ -0.34
COL2A1-207ENST00000490609 APOBEC3DQ96AK3 386 aaPredicted RBP12.93□□□□□ -0.34
COL2A1-207ENST00000490609 NEIL1Q96FI4 390 aaPredicted RBP12.93□□□□□ -0.34
COL2A1-207ENST00000490609 ZNF582Q96NG8 517 aaPredicted RBP12.93□□□□□ -0.34
COL2A1-207ENST00000490609 COQ7Q99807 217 aa12.93□□□□□ -0.34
COL2A1-207ENST00000490609 NUDT16L1Q9BRJ7 211 aaKnown RBP12.93□□□□□ -0.34
COL2A1-207ENST00000490609 ANKRD19PQ9H560 264 aa12.93□□□□□ -0.34
COL2A1-207ENST00000490609 RERGLQ9H628 205 aa12.93□□□□□ -0.34
COL2A1-207ENST00000490609 VIPAS39Q9H9C1 493 aa12.93□□□□□ -0.34
COL2A1-207ENST00000490609 NDUFAF4Q9P032 175 aa12.93□□□□□ -0.34
COL2A1-207ENST00000490609 CTSZQ9UBR2 303 aa12.93□□□□□ -0.34
COL2A1-207ENST00000490609 B9D1Q9UPM9 204 aa12.93□□□□□ -0.34
COL2A1-207ENST00000490609 FAM181BA6NEQ2 426 aa12.92□□□□□ -0.34
COL2A1-207ENST00000490609 SFTPBP07988 381 aa12.92□□□□□ -0.34
COL2A1-207ENST00000490609 ACSM4P0C7M7 580 aa12.92□□□□□ -0.34
COL2A1-207ENST00000490609 MMP9P14780 707 aa12.92□□□□□ -0.34
COL2A1-207ENST00000490609 H2AFXP16104 143 aaPredicted RBP12.92□□□□□ -0.34
COL2A1-207ENST00000490609 NCK1P16333 377 aa12.92□□□□□ -0.34
COL2A1-207ENST00000490609 MTNR1AP48039 350 aa12.92□□□□□ -0.34
COL2A1-207ENST00000490609 SRP9P49458 86 aaKnown RBP12.92□□□□□ -0.34
COL2A1-207ENST00000490609 FGF12P61328 243 aa12.92□□□□□ -0.34
COL2A1-207ENST00000490609 GK2Q14410 553 aaPredicted RBP12.92□□□□□ -0.34
COL2A1-207ENST00000490609 MAPRE2Q15555 327 aa12.92□□□□□ -0.34
COL2A1-207ENST00000490609 OCLNQ16625 522 aa12.92□□□□□ -0.34
COL2A1-207ENST00000490609 RUSC1-AS1Q66K80 236 aa12.92□□□□□ -0.34
COL2A1-207ENST00000490609 GPR139Q6DWJ6 353 aa12.92□□□□□ -0.34
COL2A1-207ENST00000490609 Q6YL49 198 aa12.92□□□□□ -0.34
COL2A1-207ENST00000490609 HDXQ7Z353 690 aa12.92□□□□□ -0.34
COL2A1-207ENST00000490609 Q8TCH9 128 aa12.92□□□□□ -0.34
COL2A1-207ENST00000490609 WFDC12Q8WWY7 111 aa12.92□□□□□ -0.34
COL2A1-207ENST00000490609 DHRS1Q96LJ7 313 aa12.92□□□□□ -0.34
COL2A1-207ENST00000490609 C1RLQ9NZP8 487 aa12.92□□□□□ -0.34
COL2A1-207ENST00000490609 SRRM5B3KS81 715 aa12.91□□□□□ -0.34
COL2A1-207ENST00000490609 DIRAS1O95057 198 aa12.91□□□□□ -0.34
COL2A1-207ENST00000490609 PSKH1P11801 424 aa12.91□□□□□ -0.34
COL2A1-207ENST00000490609 IFNA8P32881 189 aa12.91□□□□□ -0.34
COL2A1-207ENST00000490609 GGT2P36268 569 aa12.91□□□□□ -0.34
COL2A1-207ENST00000490609 PITPNBP48739 271 aa12.91□□□□□ -0.34
COL2A1-207ENST00000490609 SLC7A2P52569 658 aa12.91□□□□□ -0.34
COL2A1-207ENST00000490609 PRAMEF6Q5VXH4 476 aa12.91□□□□□ -0.34
COL2A1-207ENST00000490609 SLC18B1Q6NT16 456 aa12.91□□□□□ -0.34
COL2A1-207ENST00000490609 BTNL3Q6UXE8 466 aa12.91□□□□□ -0.34
COL2A1-207ENST00000490609 DPY19L2P2Q6ZN68 376 aa12.91□□□□□ -0.34
COL2A1-207ENST00000490609 SPATC1Q76KD6 591 aa12.91□□□□□ -0.34
COL2A1-207ENST00000490609 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.91□□□□□ -0.34
COL2A1-207ENST00000490609 KIR3DL3Q8N743 410 aa12.91□□□□□ -0.34
COL2A1-207ENST00000490609 GJC3Q8NFK1 279 aa12.91□□□□□ -0.34
COL2A1-207ENST00000490609 SLC26A10Q8NG04 563 aa12.91□□□□□ -0.34
COL2A1-207ENST00000490609 OR5L1Q8NGL2 311 aa12.91□□□□□ -0.34
COL2A1-207ENST00000490609 RSRC1Q96IZ7 334 aaKnown RBP12.91□□□□□ -0.34
COL2A1-207ENST00000490609 TBX15Q96SF7 602 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms