RNA–Protein interactions for RNA: ENST00000490193.5

USP39-216, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5

Gene USP39, Length 1,028 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-216ENST00000490193 IGHV4-59P01825 116 aa6.78□□□□□ -1.32
USP39-216ENST00000490193 IDH3AP50213 366 aa6.78□□□□□ -1.32
USP39-216ENST00000490193 GZMMP51124 257 aa6.78□□□□□ -1.32
USP39-216ENST00000490193 MTPNP58546 118 aa6.78□□□□□ -1.32
USP39-216ENST00000490193 TAS2R41P59536 307 aa6.78□□□□□ -1.32
USP39-216ENST00000490193 CTXN1P60606 82 aa6.78□□□□□ -1.32
USP39-216ENST00000490193 LSM6P62312 80 aaKnown RBP6.78□□□□□ -1.32
USP39-216ENST00000490193 FHL1Q13642 323 aa6.78□□□□□ -1.32
USP39-216ENST00000490193 SELPLGQ14242 412 aa6.78□□□□□ -1.32
USP39-216ENST00000490193 VMACQ2NL98 169 aa6.78□□□□□ -1.32
USP39-216ENST00000490193 C11orf91Q3C1V1 193 aa6.78□□□□□ -1.32
USP39-216ENST00000490193 AGKQ53H12 422 aa6.78□□□□□ -1.32
USP39-216ENST00000490193 FAM201AQ5SY85 155 aa6.78□□□□□ -1.32
USP39-216ENST00000490193 OR2T2Q6IF00 324 aa6.78□□□□□ -1.32
USP39-216ENST00000490193 DHDDSQ86SQ9 333 aa6.78□□□□□ -1.32
USP39-216ENST00000490193 OR5AS1Q8N127 324 aa6.78□□□□□ -1.32
USP39-216ENST00000490193 OR5L1Q8NGL2 311 aa6.78□□□□□ -1.32
USP39-216ENST00000490193 FAM110DQ8TAY7 271 aaPredicted RBP6.78□□□□□ -1.32
USP39-216ENST00000490193 LRTOMTQ8WZ04 291 aa6.78□□□□□ -1.32
USP39-216ENST00000490193 APOBEC3DQ96AK3 386 aaPredicted RBP6.78□□□□□ -1.32
USP39-216ENST00000490193 BPIFA2Q96DR5 249 aa6.78□□□□□ -1.32
USP39-216ENST00000490193 C7orf26Q96N11 449 aa6.78□□□□□ -1.32
USP39-216ENST00000490193 ZNF582Q96NG8 517 aaPredicted RBP6.78□□□□□ -1.32
USP39-216ENST00000490193 SIRPDQ9H106 197 aa6.78□□□□□ -1.32
USP39-216ENST00000490193 DPAGT1Q9H3H5 408 aa6.78□□□□□ -1.32
USP39-216ENST00000490193 EMC7Q9NPA0 242 aa6.78□□□□□ -1.32
USP39-216ENST00000490193 BAG5Q9UL15 447 aa6.78□□□□□ -1.32
USP39-216ENST00000490193 SH3GLB1Q9Y371 365 aa6.78□□□□□ -1.32
USP39-216ENST00000490193 TEX13CA0A0J9YWL9 993 aa6.77□□□□□ -1.33
USP39-216ENST00000490193 A0A0U1RQK1 487 aa6.77□□□□□ -1.33
USP39-216ENST00000490193 F5H5P2 479 aa6.77□□□□□ -1.33
USP39-216ENST00000490193 G3V4G9 280 aa6.77□□□□□ -1.33
USP39-216ENST00000490193 FBP2O00757 339 aa6.77□□□□□ -1.33
USP39-216ENST00000490193 OPN1MWP04001 364 aa6.77□□□□□ -1.33
USP39-216ENST00000490193 CSF1P09603 554 aa6.77□□□□□ -1.33
USP39-216ENST00000490193 OPN1MW2P0DN77 364 aa6.77□□□□□ -1.33
USP39-216ENST00000490193 OPN1MW3P0DN78 364 aa6.77□□□□□ -1.33
USP39-216ENST00000490193 IRF2P14316 349 aa6.77□□□□□ -1.33
USP39-216ENST00000490193 CD200P41217 278 aa6.77□□□□□ -1.33
USP39-216ENST00000490193 RAD23AP54725 363 aa6.77□□□□□ -1.33
USP39-216ENST00000490193 MAB21L1Q13394 359 aa6.77□□□□□ -1.33
USP39-216ENST00000490193 PIN1Q13526 163 aaPredicted RBP6.77□□□□□ -1.33
USP39-216ENST00000490193 KCNJ8Q15842 424 aa6.77□□□□□ -1.33
USP39-216ENST00000490193 CCDC92Q53HC0 331 aaPredicted RBP6.77□□□□□ -1.33
USP39-216ENST00000490193 CLEC12AQ5QGZ9 265 aa6.77□□□□□ -1.33
USP39-216ENST00000490193 METTL11BQ5VVY1 283 aa6.77□□□□□ -1.33
USP39-216ENST00000490193 COLCA1Q6ZS62 124 aa6.77□□□□□ -1.33
USP39-216ENST00000490193 IGFN1Q86VF2 1251 aa6.77□□□□□ -1.33
USP39-216ENST00000490193 PNLDC1Q8NA58 520 aaKnown RBP6.77□□□□□ -1.33
USP39-216ENST00000490193 OR1F12Q8NHA8 337 aa6.77□□□□□ -1.33
USP39-216ENST00000490193 STON2Q8WXE9 905 aa6.77□□□□□ -1.33
USP39-216ENST00000490193 SLC7A6Q92536 515 aa6.77□□□□□ -1.33
USP39-216ENST00000490193 EBF4Q9BQW3 602 aa6.77□□□□□ -1.33
USP39-216ENST00000490193 KRTAP9-9Q9BYP9 154 aa6.77□□□□□ -1.33
USP39-216ENST00000490193 KRTAP9-4Q9BYQ2 154 aa6.77□□□□□ -1.33
USP39-216ENST00000490193 PTTG3PQ9NZH4 202 aa6.77□□□□□ -1.33
USP39-216ENST00000490193 CTSZQ9UBR2 303 aa6.77□□□□□ -1.33
USP39-216ENST00000490193 COL7A1Q02388 2944 aa6.77□□□□□ -1.33
USP39-216ENST00000490193 DNAH3Q8TD57 4116 aa6.76□□□□□ -1.33
USP39-216ENST00000490193 PRSS37A4D1T9 235 aa6.76□□□□□ -1.33
USP39-216ENST00000490193 H7C1C5 153 aa6.76□□□□□ -1.33
USP39-216ENST00000490193 NDUFA2O43678 99 aa6.76□□□□□ -1.33
USP39-216ENST00000490193 PIP5K1CO60331 668 aa6.76□□□□□ -1.33
USP39-216ENST00000490193 FAM20BO75063 409 aa6.76□□□□□ -1.33
USP39-216ENST00000490193 PTBP3O95758 552 aaKnown RBP6.76□□□□□ -1.33
USP39-216ENST00000490193 DBHP09172 617 aa6.76□□□□□ -1.33
USP39-216ENST00000490193 IFI30P13284 250 aa6.76□□□□□ -1.33
USP39-216ENST00000490193 CTLA4P16410 223 aa6.76□□□□□ -1.33
USP39-216ENST00000490193 TNFRSF1BP20333 461 aa6.76□□□□□ -1.33
USP39-216ENST00000490193 FUT4P22083 530 aa6.76□□□□□ -1.33
USP39-216ENST00000490193 FPR3P25089 353 aa6.76□□□□□ -1.33
USP39-216ENST00000490193 SLC9A3P48764 834 aa6.76□□□□□ -1.33
USP39-216ENST00000490193 LCN6P62502 163 aa6.76□□□□□ -1.33
USP39-216ENST00000490193 HIST1H3AP68431 136 aa6.76□□□□□ -1.33
USP39-216ENST00000490193 ST3GAL3Q11203 375 aa6.76□□□□□ -1.33
USP39-216ENST00000490193 COX10Q12887 443 aa6.76□□□□□ -1.33
USP39-216ENST00000490193 KCNMB1Q16558 191 aa6.76□□□□□ -1.33
USP39-216ENST00000490193 MESTQ5EB52 335 aa6.76□□□□□ -1.33
USP39-216ENST00000490193 HIST2H3PS2Q5TEC6 136 aa6.76□□□□□ -1.33
USP39-216ENST00000490193 C1orf94Q6P1W5 598 aa6.76□□□□□ -1.33
USP39-216ENST00000490193 METAP1DQ6UB28 335 aaPredicted RBP6.76□□□□□ -1.33
USP39-216ENST00000490193 HIST2H3AQ71DI3 136 aa6.76□□□□□ -1.33
USP39-216ENST00000490193 FAM122BQ7Z309 247 aa6.76□□□□□ -1.33
USP39-216ENST00000490193 GALNT4Q8N4A0 578 aa6.76□□□□□ -1.33
USP39-216ENST00000490193 OR11L1Q8NGX0 322 aa6.76□□□□□ -1.33
USP39-216ENST00000490193 OR10A6Q8NH74 314 aa6.76□□□□□ -1.33
USP39-216ENST00000490193 NPRL2Q8WTW4 380 aa6.76□□□□□ -1.33
USP39-216ENST00000490193 TSPEARQ8WU66 669 aa6.76□□□□□ -1.33
USP39-216ENST00000490193 LHX4Q969G2 390 aa6.76□□□□□ -1.33
USP39-216ENST00000490193 DMRTB1Q96MA1 342 aa6.76□□□□□ -1.33
USP39-216ENST00000490193 TECTBQ96PL2 329 aa6.76□□□□□ -1.33
USP39-216ENST00000490193 COQ7Q99807 217 aa6.76□□□□□ -1.33
USP39-216ENST00000490193 ECSITQ9BQ95 431 aa6.76□□□□□ -1.33
USP39-216ENST00000490193 HDHD2Q9H0R4 259 aa6.76□□□□□ -1.33
USP39-216ENST00000490193 RABEP2Q9H5N1 569 aa6.76□□□□□ -1.33
USP39-216ENST00000490193 SMURF1Q9HCE7 757 aa6.76□□□□□ -1.33
USP39-216ENST00000490193 TRIM36Q9NQ86 728 aa6.76□□□□□ -1.33
USP39-216ENST00000490193 TMEM100Q9NV29 134 aa6.76□□□□□ -1.33
USP39-216ENST00000490193 NKIRAS1Q9NYS0 192 aa6.76□□□□□ -1.33
USP39-216ENST00000490193 ZNRD1Q9P1U0 126 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms