RNA–Protein interactions for RNA: ENST00000489352.5

HDAC6-233, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 585 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-233ENST00000489352 OR5D13Q8NGL4 314 aa9.26□□□□□ -0.93
HDAC6-233ENST00000489352 PIFOQ8TCI5 191 aa9.26□□□□□ -0.93
HDAC6-233ENST00000489352 RASD2Q96D21 266 aa9.26□□□□□ -0.93
HDAC6-233ENST00000489352 RAB17Q9H0T7 212 aa9.26□□□□□ -0.93
HDAC6-233ENST00000489352 TMEM27Q9HBJ8 222 aa9.26□□□□□ -0.93
HDAC6-233ENST00000489352 TAS2R5Q9NYW4 299 aa9.26□□□□□ -0.93
HDAC6-233ENST00000489352 KAAG1Q9UBP8 84 aa9.26□□□□□ -0.93
HDAC6-233ENST00000489352 AURKCQ9UQB9 309 aa9.26□□□□□ -0.93
HDAC6-233ENST00000489352 PLECQ15149 4684 aaKnown RBP9.26□□□□□ -0.93
HDAC6-233ENST00000489352 ALMS1Q8TCU4 4167 aa9.25□□□□□ -0.93
HDAC6-233ENST00000489352 A0A0G2JPF8 293 aa9.25□□□□□ -0.93
HDAC6-233ENST00000489352 CCDC154A6NI56 674 aa9.25□□□□□ -0.93
HDAC6-233ENST00000489352 CENPBD1B2RD01 187 aa9.25□□□□□ -0.93
HDAC6-233ENST00000489352 HNRNPCL2B2RXH8 293 aa9.25□□□□□ -0.93
HDAC6-233ENST00000489352 HNRNPCL3B7ZW38 293 aa9.25□□□□□ -0.93
HDAC6-233ENST00000489352 M0R1W7 72 aa9.25□□□□□ -0.93
HDAC6-233ENST00000489352 DOK2O60496 412 aa9.25□□□□□ -0.93
HDAC6-233ENST00000489352 HNRNPCL1O60812 293 aaKnown RBP9.25□□□□□ -0.93
HDAC6-233ENST00000489352 TRMUO75648 421 aaKnown RBP9.25□□□□□ -0.93
HDAC6-233ENST00000489352 HNRNPCL4P0DMR1 293 aa9.25□□□□□ -0.93
HDAC6-233ENST00000489352 COX5BP10606 129 aa9.25□□□□□ -0.93
HDAC6-233ENST00000489352 UMPSP11172 480 aa9.25□□□□□ -0.93
HDAC6-233ENST00000489352 ACADSP16219 412 aa9.25□□□□□ -0.93
HDAC6-233ENST00000489352 CDC25BP30305 580 aa9.25□□□□□ -0.93
HDAC6-233ENST00000489352 MYCNOSP40205 109 aa9.25□□□□□ -0.93
HDAC6-233ENST00000489352 LUMP51884 338 aaPredicted RBP9.25□□□□□ -0.93
HDAC6-233ENST00000489352 IKZF1Q13422 519 aa9.25□□□□□ -0.93
HDAC6-233ENST00000489352 LRRC10Q5BKY1 277 aa9.25□□□□□ -0.93
HDAC6-233ENST00000489352 NXNQ6DKJ4 435 aa9.25□□□□□ -0.93
HDAC6-233ENST00000489352 FBXW12Q6X9E4 464 aa9.25□□□□□ -0.93
HDAC6-233ENST00000489352 ETV3LQ6ZN32 361 aa9.25□□□□□ -0.93
HDAC6-233ENST00000489352 Q6ZS46 218 aa9.25□□□□□ -0.93
HDAC6-233ENST00000489352 ZNF621Q6ZSS3 439 aa9.25□□□□□ -0.93
HDAC6-233ENST00000489352 FAM90A1Q86YD7 464 aa9.25□□□□□ -0.93
HDAC6-233ENST00000489352 FGFRL1Q8N441 504 aa9.25□□□□□ -0.93
HDAC6-233ENST00000489352 ADAMTS16Q8TE57 1224 aa9.25□□□□□ -0.93
HDAC6-233ENST00000489352 AJUBAQ96IF1 538 aa9.25□□□□□ -0.93
HDAC6-233ENST00000489352 PANX1Q96RD7 426 aa9.25□□□□□ -0.93
HDAC6-233ENST00000489352 HCAR1Q9BXC0 346 aa9.25□□□□□ -0.93
HDAC6-233ENST00000489352 SMURF2Q9HAU4 748 aa9.25□□□□□ -0.93
HDAC6-233ENST00000489352 NINJ2Q9NZG7 142 aa9.25□□□□□ -0.93
HDAC6-233ENST00000489352 STX18Q9P2W9 335 aaKnown RBP9.25□□□□□ -0.93
HDAC6-233ENST00000489352 hCG_1807616A0A1W2PRN6 198 aa9.24□□□□□ -0.93
HDAC6-233ENST00000489352 IQCF6A8MYZ5 107 aa9.24□□□□□ -0.93
HDAC6-233ENST00000489352 TMEM233B4DJY2 109 aa9.24□□□□□ -0.93
HDAC6-233ENST00000489352 BLOC1S5-TXNDC5H3BN57 136 aa9.24□□□□□ -0.93
HDAC6-233ENST00000489352 FMO6PO60774 539 aa9.24□□□□□ -0.93
HDAC6-233ENST00000489352 FCN3O75636 299 aa9.24□□□□□ -0.93
HDAC6-233ENST00000489352 KRT75O95678 551 aa9.24□□□□□ -0.93
HDAC6-233ENST00000489352 CH25HO95992 272 aa9.24□□□□□ -0.93
HDAC6-233ENST00000489352 C1QCP02747 245 aa9.24□□□□□ -0.93
HDAC6-233ENST00000489352 FRMD6-AS1P0C7T7 363 aa9.24□□□□□ -0.93
HDAC6-233ENST00000489352 CD200P41217 278 aa9.24□□□□□ -0.93
HDAC6-233ENST00000489352 DAP3P51398 398 aaKnown RBP9.24□□□□□ -0.93
HDAC6-233ENST00000489352 OR8G1Q15617 311 aa9.24□□□□□ -0.93
HDAC6-233ENST00000489352 MICBQ29980 383 aa9.24□□□□□ -0.93
HDAC6-233ENST00000489352 UGT3A2Q3SY77 523 aa9.24□□□□□ -0.93
HDAC6-233ENST00000489352 RPS26P11Q5JNZ5 115 aaPredicted RBP9.24□□□□□ -0.93
HDAC6-233ENST00000489352 BEND6Q5SZJ8 279 aaPredicted RBP9.24□□□□□ -0.93
HDAC6-233ENST00000489352 TIFABQ6ZNK6 161 aa9.24□□□□□ -0.93
HDAC6-233ENST00000489352 SYT9Q86SS6 491 aa9.24□□□□□ -0.93
HDAC6-233ENST00000489352 PCYOX1LQ8NBM8 494 aa9.24□□□□□ -0.93
HDAC6-233ENST00000489352 AGR3Q8TD06 166 aa9.24□□□□□ -0.93
HDAC6-233ENST00000489352 CCL13Q99616 98 aa9.24□□□□□ -0.93
HDAC6-233ENST00000489352 TMEM43Q9BTV4 400 aa9.24□□□□□ -0.93
HDAC6-233ENST00000489352 MRPL13Q9BYD1 178 aaKnown RBP9.24□□□□□ -0.93
HDAC6-233ENST00000489352 PRPF19Q9UMS4 504 aaKnown RBP9.24□□□□□ -0.93
HDAC6-233ENST00000489352 NOP16Q9Y3C1 178 aaKnown RBP9.24□□□□□ -0.93
HDAC6-233ENST00000489352 UGT2A1Q9Y4X1 527 aa9.24□□□□□ -0.93
HDAC6-233ENST00000489352 IGHV3OR15-7A0A075B7D8 119 aa9.23□□□□□ -0.93
HDAC6-233ENST00000489352 A0A1W2PPL8 197 aa9.23□□□□□ -0.93
HDAC6-233ENST00000489352 A6NDX4 124 aa9.23□□□□□ -0.93
HDAC6-233ENST00000489352 A6NLC8 198 aa9.23□□□□□ -0.93
HDAC6-233ENST00000489352 SGCEO43556 437 aa9.23□□□□□ -0.93
HDAC6-233ENST00000489352 CPA3P15088 417 aa9.23□□□□□ -0.93
HDAC6-233ENST00000489352 HTR2AP28223 471 aa9.23□□□□□ -0.93
HDAC6-233ENST00000489352 SLC7A5Q01650 507 aa9.23□□□□□ -0.93
HDAC6-233ENST00000489352 CASP8Q14790 479 aa9.23□□□□□ -0.93
HDAC6-233ENST00000489352 HHATQ5VTY9 493 aa9.23□□□□□ -0.93
HDAC6-233ENST00000489352 ZDHHC24Q6UX98 284 aa9.23□□□□□ -0.93
HDAC6-233ENST00000489352 NANOGNBQ7Z5D8 188 aa9.23□□□□□ -0.93
HDAC6-233ENST00000489352 SLC38A5Q8WUX1 472 aa9.23□□□□□ -0.93
HDAC6-233ENST00000489352 CAPSLQ8WWF8 208 aa9.23□□□□□ -0.93
HDAC6-233ENST00000489352 RBP7Q96R05 134 aa9.23□□□□□ -0.93
HDAC6-233ENST00000489352 C1orf123Q9NWV4 160 aa9.23□□□□□ -0.93
HDAC6-233ENST00000489352 SAR1BQ9Y6B6 198 aa9.23□□□□□ -0.93
HDAC6-233ENST00000489352 VGLL3A8MV65 326 aa9.22□□□□□ -0.93
HDAC6-233ENST00000489352 J3QW42 95 aa9.22□□□□□ -0.93
HDAC6-233ENST00000489352 FGF4P08620 206 aa9.22□□□□□ -0.93
HDAC6-233ENST00000489352 SLC6A1P30531 599 aa9.22□□□□□ -0.93
HDAC6-233ENST00000489352 S100A3P33764 101 aa9.22□□□□□ -0.93
HDAC6-233ENST00000489352 ZNF133P52736 654 aaPredicted RBP9.22□□□□□ -0.93
HDAC6-233ENST00000489352 FMODQ06828 376 aa9.22□□□□□ -0.93
HDAC6-233ENST00000489352 SCRN3Q0VDG4 424 aa9.22□□□□□ -0.93
HDAC6-233ENST00000489352 SELPLGQ14242 412 aa9.22□□□□□ -0.93
HDAC6-233ENST00000489352 OR1Q1Q15612 314 aa9.22□□□□□ -0.93
HDAC6-233ENST00000489352 CCDC153Q494R4 210 aa9.22□□□□□ -0.93
HDAC6-233ENST00000489352 C8orf86Q6ZUL3 223 aa9.22□□□□□ -0.93
HDAC6-233ENST00000489352 OR5M8Q8NGP6 311 aa9.22□□□□□ -0.93
HDAC6-233ENST00000489352 ACMSDQ8TDX5 336 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms