RNA–Protein interactions for RNA: ENST00000489303.1

LMO4-203, Transcript of LIM domain only 4, humanhuman

TSL 2

Gene LMO4, Length 952 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-203ENST00000489303 LINC01356Q8N9X3 169 aa11.49□□□□□ -0.57
LMO4-203ENST00000489303 OR9Q1Q8NGQ5 310 aa11.49□□□□□ -0.57
LMO4-203ENST00000489303 OR4Q3Q8NH05 313 aa11.49□□□□□ -0.57
LMO4-203ENST00000489303 GTF3AQ92664 365 aaKnown RBP11.49□□□□□ -0.57
LMO4-203ENST00000489303 RAB1CQ92928 201 aa11.49□□□□□ -0.57
LMO4-203ENST00000489303 SPTSSAQ969W0 71 aa11.49□□□□□ -0.57
LMO4-203ENST00000489303 OTULINQ96BN8 352 aa11.49□□□□□ -0.57
LMO4-203ENST00000489303 HAVCR1Q96D42 359 aa11.49□□□□□ -0.57
LMO4-203ENST00000489303 DDOQ99489 341 aa11.49□□□□□ -0.57
LMO4-203ENST00000489303 RBM4Q9BWF3 364 aaKnown RBP11.49□□□□□ -0.57
LMO4-203ENST00000489303 CADM1Q9BY67 442 aaKnown RBP11.49□□□□□ -0.57
LMO4-203ENST00000489303 MSL2Q9HCI7 577 aa11.49□□□□□ -0.57
LMO4-203ENST00000489303 CMC2Q9NRP2 79 aa11.49□□□□□ -0.57
LMO4-203ENST00000489303 PTTG3PQ9NZH4 202 aa11.49□□□□□ -0.57
LMO4-203ENST00000489303 TVP23AA6NH52 213 aa11.48□□□□□ -0.57
LMO4-203ENST00000489303 SURF4O15260 269 aa11.48□□□□□ -0.57
LMO4-203ENST00000489303 PHF1O43189 567 aaPredicted RBP11.48□□□□□ -0.57
LMO4-203ENST00000489303 DEAF1O75398 565 aaPredicted RBP11.48□□□□□ -0.57
LMO4-203ENST00000489303 RP2O75695 350 aa11.48□□□□□ -0.57
LMO4-203ENST00000489303 SELEP16581 610 aa11.48□□□□□ -0.57
LMO4-203ENST00000489303 SPI1P17947 270 aa11.48□□□□□ -0.57
LMO4-203ENST00000489303 TNFRSF1AP19438 455 aa11.48□□□□□ -0.57
LMO4-203ENST00000489303 PCMT1P22061 227 aa11.48□□□□□ -0.57
LMO4-203ENST00000489303 GRK5P34947 590 aa11.48□□□□□ -0.57
LMO4-203ENST00000489303 TNFAIP6P98066 277 aaPredicted RBP11.48□□□□□ -0.57
LMO4-203ENST00000489303 CCNIQ14094 377 aa11.48□□□□□ -0.57
LMO4-203ENST00000489303 TAF13Q15543 124 aa11.48□□□□□ -0.57
LMO4-203ENST00000489303 ZNF362Q5T0B9 420 aaPredicted RBP11.48□□□□□ -0.57
LMO4-203ENST00000489303 SLC27A4Q6P1M0 643 aa11.48□□□□□ -0.57
LMO4-203ENST00000489303 CFAP77Q6ZQR2 320 aa11.48□□□□□ -0.57
LMO4-203ENST00000489303 ATG16L2Q8NAA4 619 aa11.48□□□□□ -0.57
LMO4-203ENST00000489303 PAPD5Q8NDF8 572 aaKnown RBP11.48□□□□□ -0.57
LMO4-203ENST00000489303 OR2Z1Q8NG97 314 aa11.48□□□□□ -0.57
LMO4-203ENST00000489303 OR51L1Q8NGJ5 315 aa11.48□□□□□ -0.57
LMO4-203ENST00000489303 OR6K6Q8NGW6 343 aa11.48□□□□□ -0.57
LMO4-203ENST00000489303 CCL17Q92583 94 aa11.48□□□□□ -0.57
LMO4-203ENST00000489303 ZNF582Q96NG8 517 aaPredicted RBP11.48□□□□□ -0.57
LMO4-203ENST00000489303 HCAR1Q9BXC0 346 aa11.48□□□□□ -0.57
LMO4-203ENST00000489303 POFUT1Q9H488 388 aa11.48□□□□□ -0.57
LMO4-203ENST00000489303 NARFLQ9H6Q4 476 aa11.48□□□□□ -0.57
LMO4-203ENST00000489303 MRPL22Q9NWU5 206 aaKnown RBP11.48□□□□□ -0.57
LMO4-203ENST00000489303 KIF17Q9P2E2 1029 aa11.48□□□□□ -0.57
LMO4-203ENST00000489303 MALRD1Q5VYJ5 2156 aa11.47□□□□□ -0.57
LMO4-203ENST00000489303 B4DSR2 109 aa11.47□□□□□ -0.57
LMO4-203ENST00000489303 LCATP04180 440 aa11.47□□□□□ -0.57
LMO4-203ENST00000489303 HMGN1P05114 100 aa11.47□□□□□ -0.57
LMO4-203ENST00000489303 CD55P08174 381 aa11.47□□□□□ -0.57
LMO4-203ENST00000489303 SPARCP09486 303 aa11.47□□□□□ -0.57
LMO4-203ENST00000489303 OSMP13725 252 aa11.47□□□□□ -0.57
LMO4-203ENST00000489303 ENTPD1P49961 510 aa11.47□□□□□ -0.57
LMO4-203ENST00000489303 ERFP50548 548 aa11.47□□□□□ -0.57
LMO4-203ENST00000489303 MVKQ03426 396 aa11.47□□□□□ -0.57
LMO4-203ENST00000489303 DBPQ10586 325 aaPredicted RBP11.47□□□□□ -0.57
LMO4-203ENST00000489303 CDK5R2Q13319 367 aa11.47□□□□□ -0.57
LMO4-203ENST00000489303 KRTAP24-1Q3LI83 254 aa11.47□□□□□ -0.57
LMO4-203ENST00000489303 FBXW12Q6X9E4 464 aa11.47□□□□□ -0.57
LMO4-203ENST00000489303 TMEM179BQ7Z7N9 219 aa11.47□□□□□ -0.57
LMO4-203ENST00000489303 CLDND2Q8NHS1 167 aa11.47□□□□□ -0.57
LMO4-203ENST00000489303 DNAJC9Q8WXX5 260 aa11.47□□□□□ -0.57
LMO4-203ENST00000489303 NRBF2Q96F24 287 aa11.47□□□□□ -0.57
LMO4-203ENST00000489303 PLEKHA8Q96JA3 519 aa11.47□□□□□ -0.57
LMO4-203ENST00000489303 COPS4Q9BT78 406 aa11.47□□□□□ -0.57
LMO4-203ENST00000489303 SOX7Q9BT81 388 aa11.47□□□□□ -0.57
LMO4-203ENST00000489303 C1QTNF5Q9BXJ0 243 aa11.47□□□□□ -0.57
LMO4-203ENST00000489303 NMNAT2Q9BZQ4 307 aa11.47□□□□□ -0.57
LMO4-203ENST00000489303 COMMD3-BMI1R4GMX3 469 aa11.47□□□□□ -0.57
LMO4-203ENST00000489303 PRR23D1E9PI22 279 aaPredicted RBP11.46□□□□□ -0.57
LMO4-203ENST00000489303 M0R135 149 aa11.46□□□□□ -0.57
LMO4-203ENST00000489303 ZNF593O00488 134 aaPredicted RBP11.46□□□□□ -0.57
LMO4-203ENST00000489303 CIB2O75838 187 aa11.46□□□□□ -0.57
LMO4-203ENST00000489303 GYPBP06028 91 aa11.46□□□□□ -0.57
LMO4-203ENST00000489303 ACSM4P0C7M7 580 aa11.46□□□□□ -0.57
LMO4-203ENST00000489303 FAM157CP0CG43 387 aa11.46□□□□□ -0.57
LMO4-203ENST00000489303 PRR23D2P0DMB1 279 aaPredicted RBP11.46□□□□□ -0.57
LMO4-203ENST00000489303 ANPEPP15144 967 aa11.46□□□□□ -0.57
LMO4-203ENST00000489303 IGFBP5P24593 272 aa11.46□□□□□ -0.57
LMO4-203ENST00000489303 IL2RGP31785 369 aa11.46□□□□□ -0.57
LMO4-203ENST00000489303 SLC15A1P46059 708 aa11.46□□□□□ -0.57
LMO4-203ENST00000489303 SLC6A9P48067 706 aa11.46□□□□□ -0.57
LMO4-203ENST00000489303 CDH15P55291 814 aa11.46□□□□□ -0.57
LMO4-203ENST00000489303 GINS1Q14691 196 aa11.46□□□□□ -0.57
LMO4-203ENST00000489303 HLXQ14774 488 aaPredicted RBP11.46□□□□□ -0.57
LMO4-203ENST00000489303 TMEM255AQ5JRV8 349 aa11.46□□□□□ -0.57
LMO4-203ENST00000489303 C1orf146Q5VVC0 180 aa11.46□□□□□ -0.57
LMO4-203ENST00000489303 OR2T2Q6IF00 324 aa11.46□□□□□ -0.57
LMO4-203ENST00000489303 SHQ1Q6PI26 577 aaKnown RBP11.46□□□□□ -0.57
LMO4-203ENST00000489303 DCXRQ7Z4W1 244 aa11.46□□□□□ -0.57
LMO4-203ENST00000489303 OR5AS1Q8N127 324 aa11.46□□□□□ -0.57
LMO4-203ENST00000489303 IQCF1Q8N6M8 205 aa11.46□□□□□ -0.57
LMO4-203ENST00000489303 ZNF511Q8NB15 262 aa11.46□□□□□ -0.57
LMO4-203ENST00000489303 OR8G5Q8NG78 346 aa11.46□□□□□ -0.57
LMO4-203ENST00000489303 OR13G1Q8NGZ3 307 aa11.46□□□□□ -0.57
LMO4-203ENST00000489303 RAB39BQ96DA2 213 aa11.46□□□□□ -0.57
LMO4-203ENST00000489303 ZNF799Q96GE5 643 aa11.46□□□□□ -0.57
LMO4-203ENST00000489303 WDR76Q9H967 626 aa11.46□□□□□ -0.57
LMO4-203ENST00000489303 CENPMQ9NSP4 180 aa11.46□□□□□ -0.57
LMO4-203ENST00000489303 IL19Q9UHD0 177 aa11.46□□□□□ -0.57
LMO4-203ENST00000489303 TIPRLO75663 272 aa11.45□□□□□ -0.58
LMO4-203ENST00000489303 CLUP10909 449 aa11.45□□□□□ -0.58
LMO4-203ENST00000489303 PRKACGP22612 351 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms