RNA–Protein interactions for RNA: ENST00000488596.5

CD46-215, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 872 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-215ENST00000488596 UCK2Q9BZX2 261 aa1.83□□□□□ -2.12
CD46-215ENST00000488596 ZYG11BQ9C0D3 744 aa1.83□□□□□ -2.12
CD46-215ENST00000488596 SLC7A5P2Q9GIP4 190 aa1.83□□□□□ -2.12
CD46-215ENST00000488596 FGF23Q9GZV9 251 aaPredicted RBP1.83□□□□□ -2.12
CD46-215ENST00000488596 OR52D1Q9H346 318 aa1.83□□□□□ -2.12
CD46-215ENST00000488596 TMEM38AQ9H6F2 299 aa1.83□□□□□ -2.12
CD46-215ENST00000488596 VPS37BQ9H9H4 285 aa1.83□□□□□ -2.12
CD46-215ENST00000488596 MRM3Q9HC36 420 aaKnown RBP1.83□□□□□ -2.12
CD46-215ENST00000488596 HYOU1Q9Y4L1 999 aa1.83□□□□□ -2.12
CD46-215ENST00000488596 COL22A1Q8NFW1 1626 aaPredicted RBP1.82□□□□□ -2.12
CD46-215ENST00000488596 SMIM26A0A096LP01 95 aa1.82□□□□□ -2.12
CD46-215ENST00000488596 A0A0J9YXV3 536 aa1.82□□□□□ -2.12
CD46-215ENST00000488596 A0A1W2PQ67 120 aa1.82□□□□□ -2.12
CD46-215ENST00000488596 C7orf66A4D0T2 115 aa1.82□□□□□ -2.12
CD46-215ENST00000488596 PLPP1O14494 284 aa1.82□□□□□ -2.12
CD46-215ENST00000488596 CDC40O60508 579 aaKnown RBP eCLIP1.82□□□□□ -2.12
CD46-215ENST00000488596 MPZL1O95297 269 aa1.82□□□□□ -2.12
CD46-215ENST00000488596 LSM8O95777 96 aaKnown RBP1.82□□□□□ -2.12
CD46-215ENST00000488596 HLA-DQA1P01909 254 aa1.82□□□□□ -2.12
CD46-215ENST00000488596 CTRB1P17538 263 aa1.82□□□□□ -2.12
CD46-215ENST00000488596 GSTM3P21266 225 aa1.82□□□□□ -2.12
CD46-215ENST00000488596 IL32P24001 234 aa1.82□□□□□ -2.12
CD46-215ENST00000488596 HMOX2P30519 316 aa1.82□□□□□ -2.12
CD46-215ENST00000488596 OPRK1P41145 380 aa1.82□□□□□ -2.12
CD46-215ENST00000488596 SERPINB8P50452 374 aa1.82□□□□□ -2.12
CD46-215ENST00000488596 RAB7AP51149 207 aa1.82□□□□□ -2.12
CD46-215ENST00000488596 GBE1Q04446 702 aa1.82□□□□□ -2.12
CD46-215ENST00000488596 MPV17L2Q567V2 206 aa1.82□□□□□ -2.12
CD46-215ENST00000488596 TCEAL5Q5H9L2 206 aa1.82□□□□□ -2.12
CD46-215ENST00000488596 AVPI1Q5T686 147 aa1.82□□□□□ -2.12
CD46-215ENST00000488596 TPTE2P1Q5T6R2 138 aa1.82□□□□□ -2.12
CD46-215ENST00000488596 C1orf185Q5T7R7 199 aa1.82□□□□□ -2.12
CD46-215ENST00000488596 ZFP1Q6P2D0 407 aa1.82□□□□□ -2.12
CD46-215ENST00000488596 ZNF880Q6PDB4 577 aa1.82□□□□□ -2.12
CD46-215ENST00000488596 SNX20Q7Z614 316 aa1.82□□□□□ -2.12
CD46-215ENST00000488596 CBLN2Q8IUK8 224 aa1.82□□□□□ -2.12
CD46-215ENST00000488596 NKAIN4Q8IVV8 208 aa1.82□□□□□ -2.12
CD46-215ENST00000488596 CDKL3Q8IVW4 592 aaPredicted RBP1.82□□□□□ -2.12
CD46-215ENST00000488596 OFCC1Q8IZS5 231 aa1.82□□□□□ -2.12
CD46-215ENST00000488596 ARRDC1Q8N5I2 433 aa1.82□□□□□ -2.12
CD46-215ENST00000488596 PQLC3Q8N755 202 aa1.82□□□□□ -2.12
CD46-215ENST00000488596 NECAP1Q8NC96 275 aa1.82□□□□□ -2.12
CD46-215ENST00000488596 CIRBP-AS1Q8TBR5 109 aa1.82□□□□□ -2.12
CD46-215ENST00000488596 RGP1Q92546 391 aaPredicted RBP1.82□□□□□ -2.12
CD46-215ENST00000488596 TCEAL3Q969E4 200 aa1.82□□□□□ -2.12
CD46-215ENST00000488596 L3HYPDHQ96EM0 354 aa1.82□□□□□ -2.12
CD46-215ENST00000488596 HSD17B10Q99714 261 aaKnown RBP1.82□□□□□ -2.12
CD46-215ENST00000488596 C20orf96Q9NUD7 363 aaPredicted RBP1.82□□□□□ -2.12
CD46-215ENST00000488596 GGA2Q9UJY4 613 aa1.82□□□□□ -2.12
CD46-215ENST00000488596 RCL1Q9Y2P8 373 aaKnown RBP1.82□□□□□ -2.12
CD46-215ENST00000488596 PALLDQ8WX93 1383 aa1.82□□□□□ -2.12
CD46-215ENST00000488596 TRAV19A0A0A6YYK7 116 aa1.81□□□□□ -2.12
CD46-215ENST00000488596 IGKV6-21A0A0C4DH24 114 aa1.81□□□□□ -2.12
CD46-215ENST00000488596 KBTBD11-OT1A0A1B0GTJ5 212 aa1.81□□□□□ -2.12
CD46-215ENST00000488596 SPRR5A0A1B0GTR4 108 aa1.81□□□□□ -2.12
CD46-215ENST00000488596 SYCE1LA8MT33 242 aa1.81□□□□□ -2.12
CD46-215ENST00000488596 K7EM74 188 aa1.81□□□□□ -2.12
CD46-215ENST00000488596 DNASE2O00115 360 aaPredicted RBP1.81□□□□□ -2.12
CD46-215ENST00000488596 WRBO00258 174 aa1.81□□□□□ -2.12
CD46-215ENST00000488596 BPY2O14599 106 aa1.81□□□□□ -2.12
CD46-215ENST00000488596 NMT2O60551 498 aa1.81□□□□□ -2.12
CD46-215ENST00000488596 AQP8O94778 261 aa1.81□□□□□ -2.12
CD46-215ENST00000488596 TPM2P07951 284 aa1.81□□□□□ -2.12
CD46-215ENST00000488596 CD37P11049 281 aa1.81□□□□□ -2.12
CD46-215ENST00000488596 TCP1P17987 556 aaKnown RBP1.81□□□□□ -2.12
CD46-215ENST00000488596 GALP22466 123 aa1.81□□□□□ -2.12
CD46-215ENST00000488596 NBL1P41271 181 aa1.81□□□□□ -2.12
CD46-215ENST00000488596 RBM34P42696 430 aaKnown RBP1.81□□□□□ -2.12
CD46-215ENST00000488596 CCNG1P51959 295 aa1.81□□□□□ -2.12
CD46-215ENST00000488596 KRTAP10-10P60014 251 aa1.81□□□□□ -2.12
CD46-215ENST00000488596 RPL23P62829 140 aaKnown RBP1.81□□□□□ -2.12
CD46-215ENST00000488596 PRR3P79522 188 aaKnown RBP1.81□□□□□ -2.12
CD46-215ENST00000488596 CYP24A1Q07973 514 aa1.81□□□□□ -2.12
CD46-215ENST00000488596 CDC20Q12834 499 aa1.81□□□□□ -2.12
CD46-215ENST00000488596 IFT88Q13099 833 aa1.81□□□□□ -2.12
CD46-215ENST00000488596 ITIH4Q14624 930 aa1.81□□□□□ -2.12
CD46-215ENST00000488596 NCF4Q15080 339 aa1.81□□□□□ -2.12
CD46-215ENST00000488596 RBMY1FQ15415 496 aaKnown RBP1.81□□□□□ -2.12
CD46-215ENST00000488596 PGGHGQ32M88 737 aa1.81□□□□□ -2.12
CD46-215ENST00000488596 COX19Q49B96 90 aa1.81□□□□□ -2.12
CD46-215ENST00000488596 GCSAMLQ5JQS6 135 aa1.81□□□□□ -2.12
CD46-215ENST00000488596 CLEC2AQ6UVW9 174 aa1.81□□□□□ -2.12
CD46-215ENST00000488596 SPESP1Q6UW49 350 aa1.81□□□□□ -2.12
CD46-215ENST00000488596 SSX9Q7RTT3 188 aa1.81□□□□□ -2.12
CD46-215ENST00000488596 SLC16A13Q7RTY0 426 aa1.81□□□□□ -2.12
CD46-215ENST00000488596 OSR2Q8N2R0 312 aa1.81□□□□□ -2.12
CD46-215ENST00000488596 RNF182Q8N6D2 247 aa1.81□□□□□ -2.12
CD46-215ENST00000488596 OR56A4Q8NGH8 313 aa1.81□□□□□ -2.12
CD46-215ENST00000488596 OR6Q1Q8NGQ2 317 aa1.81□□□□□ -2.12
CD46-215ENST00000488596 OR52E5Q8NH55 327 aa1.81□□□□□ -2.12
CD46-215ENST00000488596 TSEN15Q8WW01 171 aaKnown RBP1.81□□□□□ -2.12
CD46-215ENST00000488596 NRBF2Q96F24 287 aa1.81□□□□□ -2.12
CD46-215ENST00000488596 LINC00477Q96M19 166 aa1.81□□□□□ -2.12
CD46-215ENST00000488596 RNF5Q99942 180 aa1.81□□□□□ -2.12
CD46-215ENST00000488596 UQCC2Q9BRT2 126 aa1.81□□□□□ -2.12
CD46-215ENST00000488596 TIMM29Q9BSF4 260 aa1.81□□□□□ -2.12
CD46-215ENST00000488596 SCRT1Q9BWW7 348 aa1.81□□□□□ -2.12
CD46-215ENST00000488596 SLIRPQ9GZT3 109 aaKnown RBP1.81□□□□□ -2.12
CD46-215ENST00000488596 TMEM27Q9HBJ8 222 aa1.81□□□□□ -2.12
CD46-215ENST00000488596 SLC17A7Q9P2U7 560 aa1.81□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 89.5 ms