RNA–Protein interactions for RNA: ENST00000485737.1

SMARCC1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 4

Gene SMARCC1, Length 631 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-206ENST00000485737 WSB2Q9NYS7 404 aaPredicted RBP4.19□□□□□ -1.74
SMARCC1-206ENST00000485737 TAS2R4Q9NYW5 299 aa4.19□□□□□ -1.74
SMARCC1-206ENST00000485737 GDE1Q9NZC3 331 aa4.19□□□□□ -1.74
SMARCC1-206ENST00000485737 ASH2LQ9UBL3 628 aa4.19□□□□□ -1.74
SMARCC1-206ENST00000485737 METTL1Q9UBP6 276 aaKnown RBP4.19□□□□□ -1.74
SMARCC1-206ENST00000485737 DNAJB11Q9UBS4 358 aa4.19□□□□□ -1.74
SMARCC1-206ENST00000485737 MSRAQ9UJ68 235 aa4.19□□□□□ -1.74
SMARCC1-206ENST00000485737 IKZF2Q9UKS7 526 aa4.19□□□□□ -1.74
SMARCC1-206ENST00000485737 FBXO4Q9UKT5 387 aa4.19□□□□□ -1.74
SMARCC1-206ENST00000485737 DHDHQ9UQ10 334 aa4.19□□□□□ -1.74
SMARCC1-206ENST00000485737 MRPS2Q9Y399 296 aaKnown RBP4.19□□□□□ -1.74
SMARCC1-206ENST00000485737 WIF1Q9Y5W5 379 aa4.19□□□□□ -1.74
SMARCC1-206ENST00000485737 TP53BP1Q12888 1972 aaPredicted RBP4.18□□□□□ -1.74
SMARCC1-206ENST00000485737 CACNA1IQ9P0X4 2223 aa4.18□□□□□ -1.74
SMARCC1-206ENST00000485737 IGLV1-36A0A0B4J1U3 117 aa4.18□□□□□ -1.74
SMARCC1-206ENST00000485737 SYNDIG1LA6NDD5 238 aa4.18□□□□□ -1.74
SMARCC1-206ENST00000485737 WIPF3A6NGB9 483 aa4.18□□□□□ -1.74
SMARCC1-206ENST00000485737 C5orf52A6NGY3 159 aa4.18□□□□□ -1.74
SMARCC1-206ENST00000485737 HIDE1A8MVS5 230 aa4.18□□□□□ -1.74
SMARCC1-206ENST00000485737 LINC00587B1AMM8 73 aa4.18□□□□□ -1.74
SMARCC1-206ENST00000485737 H0YGG7 62 aa4.18□□□□□ -1.74
SMARCC1-206ENST00000485737 H0YIZ8 118 aa4.18□□□□□ -1.74
SMARCC1-206ENST00000485737 MFNGO00587 321 aa4.18□□□□□ -1.74
SMARCC1-206ENST00000485737 CCSO14618 274 aa4.18□□□□□ -1.74
SMARCC1-206ENST00000485737 TAAR5O14804 337 aa4.18□□□□□ -1.74
SMARCC1-206ENST00000485737 SCAMP1O15126 338 aa4.18□□□□□ -1.74
SMARCC1-206ENST00000485737 YKT6O15498 198 aa4.18□□□□□ -1.74
SMARCC1-206ENST00000485737 ZNF208O43345 1280 aa4.18□□□□□ -1.74
SMARCC1-206ENST00000485737 LATO43561 262 aa4.18□□□□□ -1.74
SMARCC1-206ENST00000485737 PLRG1O43660 514 aaKnown RBP4.18□□□□□ -1.74
SMARCC1-206ENST00000485737 GATCO43716 136 aaKnown RBP4.18□□□□□ -1.74
SMARCC1-206ENST00000485737 OR10H2O60403 315 aa4.18□□□□□ -1.74
SMARCC1-206ENST00000485737 STK17BO94768 372 aa4.18□□□□□ -1.74
SMARCC1-206ENST00000485737 PLGP00747 810 aaPredicted RBP4.18□□□□□ -1.74
SMARCC1-206ENST00000485737 CSTAP01040 98 aa4.18□□□□□ -1.74
SMARCC1-206ENST00000485737 GAPDHP04406 335 aaKnown RBP4.18□□□□□ -1.74
SMARCC1-206ENST00000485737 CD5P06127 495 aa4.18□□□□□ -1.74
SMARCC1-206ENST00000485737 DCNP07585 359 aaKnown RBP4.18□□□□□ -1.74
SMARCC1-206ENST00000485737 DBHP09172 617 aa4.18□□□□□ -1.74
SMARCC1-206ENST00000485737 CT45A8P0DMV1 189 aa4.18□□□□□ -1.74
SMARCC1-206ENST00000485737 CT45A9P0DMV2 189 aa4.18□□□□□ -1.74
SMARCC1-206ENST00000485737 NAT2P11245 290 aa4.18□□□□□ -1.74
SMARCC1-206ENST00000485737 PGAM2P15259 253 aa4.18□□□□□ -1.74
SMARCC1-206ENST00000485737 MUC1P15941 1255 aaPredicted RBP4.18□□□□□ -1.74
SMARCC1-206ENST00000485737 ZNF28P17035 718 aa4.18□□□□□ -1.74
SMARCC1-206ENST00000485737 RCC1P18754 421 aaPredicted RBP4.18□□□□□ -1.74
SMARCC1-206ENST00000485737 AGAP20933 346 aa4.18□□□□□ -1.74
SMARCC1-206ENST00000485737 MAOAP21397 527 aa4.18□□□□□ -1.74
SMARCC1-206ENST00000485737 CCKBRP32239 447 aa4.18□□□□□ -1.74
SMARCC1-206ENST00000485737 GALNSP34059 522 aa4.18□□□□□ -1.74
SMARCC1-206ENST00000485737 PTGFRP43088 359 aa4.18□□□□□ -1.74
SMARCC1-206ENST00000485737 KCNJ3P48549 501 aa4.18□□□□□ -1.74
SMARCC1-206ENST00000485737 ARHGDIBP52566 201 aa4.18□□□□□ -1.74
SMARCC1-206ENST00000485737 STARD6P59095 220 aa4.18□□□□□ -1.74
SMARCC1-206ENST00000485737 CTXN1P60606 82 aa4.18□□□□□ -1.74
SMARCC1-206ENST00000485737 ARF3P61204 181 aaPredicted RBP4.18□□□□□ -1.74
SMARCC1-206ENST00000485737 POLR2GP62487 172 aaKnown RBP eCLIP4.18□□□□□ -1.74
SMARCC1-206ENST00000485737 ADAM8P78325 824 aa4.18□□□□□ -1.74
SMARCC1-206ENST00000485737 QRFPP83859 136 aa4.18□□□□□ -1.74
SMARCC1-206ENST00000485737 HGFACQ04756 655 aa4.18□□□□□ -1.74
SMARCC1-206ENST00000485737 RPL18Q07020 188 aaKnown RBP4.18□□□□□ -1.74
SMARCC1-206ENST00000485737 MFGE8Q08431 387 aaPredicted RBP4.18□□□□□ -1.74
SMARCC1-206ENST00000485737 PDZK1IP1Q13113 114 aa4.18□□□□□ -1.74
SMARCC1-206ENST00000485737 AIMP2Q13155 320 aaKnown RBP4.18□□□□□ -1.74
SMARCC1-206ENST00000485737 ATXN7L3Q14CW9 347 aaPredicted RBP4.18□□□□□ -1.74
SMARCC1-206ENST00000485737 TAF13Q15543 124 aa4.18□□□□□ -1.74
SMARCC1-206ENST00000485737 GFOD2Q3B7J2 385 aa4.18□□□□□ -1.74
SMARCC1-206ENST00000485737 ZNF260Q3ZCT1 412 aa4.18□□□□□ -1.74
SMARCC1-206ENST00000485737 CDNFQ49AH0 187 aa4.18□□□□□ -1.74
SMARCC1-206ENST00000485737 C2orf27AQ580R0 203 aa4.18□□□□□ -1.74
SMARCC1-206ENST00000485737 CT45A2Q5DJT8 189 aa4.18□□□□□ -1.74
SMARCC1-206ENST00000485737 FAM209BQ5JX69 171 aa4.18□□□□□ -1.74
SMARCC1-206ENST00000485737 VAX1Q5SQQ9 334 aa4.18□□□□□ -1.74
SMARCC1-206ENST00000485737 TMEM244Q5VVB8 128 aa4.18□□□□□ -1.74
SMARCC1-206ENST00000485737 EIF5AL1Q6IS14 154 aaKnown RBP4.18□□□□□ -1.74
SMARCC1-206ENST00000485737 SLC18B1Q6NT16 456 aa4.18□□□□□ -1.74
SMARCC1-206ENST00000485737 KCTD18Q6PI47 426 aaPredicted RBP4.18□□□□□ -1.74
SMARCC1-206ENST00000485737 FIGLAQ6QHK4 219 aa4.18□□□□□ -1.74
SMARCC1-206ENST00000485737 DBX2Q6ZNG2 339 aa4.18□□□□□ -1.74
SMARCC1-206ENST00000485737 DPY19L4Q7Z388 723 aa4.18□□□□□ -1.74
SMARCC1-206ENST00000485737 PEG10Q86TG7 708 aaKnown RBP4.18□□□□□ -1.74
SMARCC1-206ENST00000485737 FJX1Q86VR8 437 aa4.18□□□□□ -1.74
SMARCC1-206ENST00000485737 TMEM200AQ86VY9 491 aa4.18□□□□□ -1.74
SMARCC1-206ENST00000485737 HOGA1Q86XE5 327 aa4.18□□□□□ -1.74
SMARCC1-206ENST00000485737 ANGPTL5Q86XS5 388 aa4.18□□□□□ -1.74
SMARCC1-206ENST00000485737 TMEM151BQ8IW70 566 aa4.18□□□□□ -1.74
SMARCC1-206ENST00000485737 SFTPA1Q8IWL2 248 aa4.18□□□□□ -1.74
SMARCC1-206ENST00000485737 COMMD1Q8N668 190 aa4.18□□□□□ -1.74
SMARCC1-206ENST00000485737 CSNK1A1LQ8N752 337 aa4.18□□□□□ -1.74
SMARCC1-206ENST00000485737 BCORP1Q8N888 145 aa4.18□□□□□ -1.74
SMARCC1-206ENST00000485737 MRPL43Q8N983 215 aaKnown RBP4.18□□□□□ -1.74
SMARCC1-206ENST00000485737 ZSCAN4Q8NAM6 433 aaPredicted RBP4.18□□□□□ -1.74
SMARCC1-206ENST00000485737 OR4N2Q8NGD1 307 aa4.18□□□□□ -1.74
SMARCC1-206ENST00000485737 OR5T3Q8NGG3 340 aa4.18□□□□□ -1.74
SMARCC1-206ENST00000485737 LYPD6BQ8NI32 183 aa4.18□□□□□ -1.74
SMARCC1-206ENST00000485737 ZNF519Q8TB69 540 aa4.18□□□□□ -1.74
SMARCC1-206ENST00000485737 PAQR8Q8TEZ7 354 aa4.18□□□□□ -1.74
SMARCC1-206ENST00000485737 ASB5Q8WWX0 329 aa4.18□□□□□ -1.74
SMARCC1-206ENST00000485737 DCUN1D4Q92564 292 aa4.18□□□□□ -1.74
SMARCC1-206ENST00000485737 TCEAL3Q969E4 200 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 112 ms